RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 ARMC4Q5T2S8 1044 aa5.07□□□□□ -1.6
TOPBP1-201ENST00000260810 ANGPTL8Q6UXH0 198 aa5.07□□□□□ -1.6
TOPBP1-201ENST00000260810 SVOPQ8N4V2 548 aa5.07□□□□□ -1.6
TOPBP1-201ENST00000260810 SYT14Q8NB59 555 aa5.07□□□□□ -1.6
TOPBP1-201ENST00000260810 METTL2AQ96IZ6 378 aaKnown RBP5.07□□□□□ -1.6
TOPBP1-201ENST00000260810 BBS4Q96RK4 519 aa5.07□□□□□ -1.6
TOPBP1-201ENST00000260810 ADGRE2Q9UHX3 823 aa5.07□□□□□ -1.6
TOPBP1-201ENST00000260810 CBLCQ9ULV8 474 aa5.07□□□□□ -1.6
TOPBP1-201ENST00000260810 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP5.07□□□□□ -1.6
TOPBP1-201ENST00000260810 PADI4Q9UM07 663 aa5.07□□□□□ -1.6
TOPBP1-201ENST00000260810 NTSP30990 170 aa5.06□□□□□ -1.6
TOPBP1-201ENST00000260810 ARSFP54793 590 aa5.06□□□□□ -1.6
TOPBP1-201ENST00000260810 RGS1Q08116 209 aa5.06□□□□□ -1.6
TOPBP1-201ENST00000260810 SF3B4Q15427 424 aaKnown RBP eCLIP5.06□□□□□ -1.61e-6■■■□□ 16.7
TOPBP1-201ENST00000260810 IQCF1Q8N6M8 205 aa5.06□□□□□ -1.6
TOPBP1-201ENST00000260810 SETD9Q8NE22 299 aa5.06□□□□□ -1.6
TOPBP1-201ENST00000260810 TGM7Q96PF1 710 aa5.06□□□□□ -1.6
TOPBP1-201ENST00000260810 ZFYVE21Q9BQ24 234 aa5.06□□□□□ -1.6
TOPBP1-201ENST00000260810 PCED1AQ9H1Q7 454 aa5.06□□□□□ -1.6
TOPBP1-201ENST00000260810 TOR3AQ9H497 397 aa5.06□□□□□ -1.6
TOPBP1-201ENST00000260810 MRPS18AQ9NVS2 196 aaKnown RBP5.06□□□□□ -1.6
TOPBP1-201ENST00000260810 RNF6Q9Y252 685 aa5.06□□□□□ -1.6
TOPBP1-201ENST00000260810 H0YJX3 145 aa5.06□□□□□ -1.6
TOPBP1-201ENST00000260810 H3BNH8 94 aa5.06□□□□□ -1.6
TOPBP1-201ENST00000260810 DXOO77932 396 aaKnown RBP5.06□□□□□ -1.6
TOPBP1-201ENST00000260810 MYF6P23409 242 aa5.06□□□□□ -1.6
TOPBP1-201ENST00000260810 S100A5P33763 92 aa5.06□□□□□ -1.6
TOPBP1-201ENST00000260810 BTCP35070 178 aa5.06□□□□□ -1.6
TOPBP1-201ENST00000260810 ZNF133P52736 654 aaPredicted RBP5.06□□□□□ -1.6
TOPBP1-201ENST00000260810 MRPS15P82914 257 aaKnown RBP5.06□□□□□ -1.6
TOPBP1-201ENST00000260810 ZNF85Q03923 595 aa5.06□□□□□ -1.6
TOPBP1-201ENST00000260810 SNTA1Q13424 505 aa5.06□□□□□ -1.6
TOPBP1-201ENST00000260810 VEZF1Q14119 521 aa5.06□□□□□ -1.6
TOPBP1-201ENST00000260810 DSG2Q14126 1118 aa5.06□□□□□ -1.6
TOPBP1-201ENST00000260810 ZNF239Q16600 458 aaKnown RBP5.06□□□□□ -1.6
TOPBP1-201ENST00000260810 GRAMD1BQ3KR37 738 aa5.06□□□□□ -1.6
TOPBP1-201ENST00000260810 FAM166AQ6J272 317 aa5.06□□□□□ -1.6
TOPBP1-201ENST00000260810 ZNF529Q6P280 563 aa5.06□□□□□ -1.6
TOPBP1-201ENST00000260810 TMEM71Q6P5X7 295 aa5.06□□□□□ -1.6
TOPBP1-201ENST00000260810 IGF2-ASQ6U949 168 aa5.06□□□□□ -1.6
TOPBP1-201ENST00000260810 IKBIPQ70UQ0 350 aa5.06□□□□□ -1.6
TOPBP1-201ENST00000260810 RD3Q7Z3Z2 195 aa5.06□□□□□ -1.6
TOPBP1-201ENST00000260810 PEX5LQ8IYB4 626 aa5.06□□□□□ -1.6
TOPBP1-201ENST00000260810 EID2Q8N6I1 236 aa5.06□□□□□ -1.6
TOPBP1-201ENST00000260810 HAVCR2Q8TDQ0 301 aa5.06□□□□□ -1.6
TOPBP1-201ENST00000260810 TTC9Q92623 222 aa5.06□□□□□ -1.6
TOPBP1-201ENST00000260810 ZNF566Q969W8 418 aa5.06□□□□□ -1.6
TOPBP1-201ENST00000260810 AHCYL2Q96HN2 611 aaKnown RBP5.06□□□□□ -1.6
TOPBP1-201ENST00000260810 HSH2DQ96JZ2 352 aa5.06□□□□□ -1.6
TOPBP1-201ENST00000260810 HRASLS5Q96KN8 279 aa5.06□□□□□ -1.6
TOPBP1-201ENST00000260810 OR52E6Q96RD3 313 aa5.06□□□□□ -1.6
TOPBP1-201ENST00000260810 LIME1Q9H400 295 aa5.06□□□□□ -1.6
TOPBP1-201ENST00000260810 LYRM4Q9HD34 91 aa5.06□□□□□ -1.6
TOPBP1-201ENST00000260810 PLSCR3Q9NRY6 295 aa5.06□□□□□ -1.6
TOPBP1-201ENST00000260810 THUMPD1Q9NXG2 353 aaKnown RBP5.06□□□□□ -1.6
TOPBP1-201ENST00000260810 B3GNT2Q9NY97 397 aa5.06□□□□□ -1.6
TOPBP1-201ENST00000260810 GPSM3Q9Y4H4 160 aa5.06□□□□□ -1.6
TOPBP1-201ENST00000260810 DTNAQ9Y4J8 743 aa5.06□□□□□ -1.6
TOPBP1-201ENST00000260810 ZNF716A6NP11 495 aa5.06□□□□□ -1.6
TOPBP1-201ENST00000260810 PTHP01270 115 aa5.06□□□□□ -1.6
TOPBP1-201ENST00000260810 ITGA2P17301 1181 aa5.06□□□□□ -1.6
TOPBP1-201ENST00000260810 ITPKBP27987 946 aa5.06□□□□□ -1.6
TOPBP1-201ENST00000260810 OPRM1P35372 400 aa5.06□□□□□ -1.6
TOPBP1-201ENST00000260810 ADH7P40394 386 aa5.06□□□□□ -1.6
TOPBP1-201ENST00000260810 CRYBB2P43320 205 aa5.06□□□□□ -1.6
TOPBP1-201ENST00000260810 PRIM2P49643 509 aa5.06□□□□□ -1.6
TOPBP1-201ENST00000260810 BLMHQ13867 455 aa5.06□□□□□ -1.6
TOPBP1-201ENST00000260810 CLEC12AQ5QGZ9 265 aa5.06□□□□□ -1.6
TOPBP1-201ENST00000260810 GDF7Q7Z4P5 450 aa5.06□□□□□ -1.6
TOPBP1-201ENST00000260810 MFSD4AQ8N468 514 aa5.06□□□□□ -1.6
TOPBP1-201ENST00000260810 PLPP5Q8NEB5 264 aa5.06□□□□□ -1.6
TOPBP1-201ENST00000260810 SMPDL3AQ92484 453 aa5.06□□□□□ -1.6
TOPBP1-201ENST00000260810 DNAJA3Q96EY1 480 aa5.06□□□□□ -1.6
TOPBP1-201ENST00000260810 DUSP26Q9BV47 211 aa5.06□□□□□ -1.6
TOPBP1-201ENST00000260810 ZNF552Q9H707 407 aaPredicted RBP5.06□□□□□ -1.6
TOPBP1-201ENST00000260810 DDX28Q9NUL7 540 aaKnown RBP5.06□□□□□ -1.6
TOPBP1-201ENST00000260810 ZSCAN32Q9NX65 697 aa5.06□□□□□ -1.6
TOPBP1-201ENST00000260810 SONP18583 2426 aaKnown RBP5.06□□□□□ -1.6
TOPBP1-201ENST00000260810 OXSR1O95747 527 aaPredicted RBP5.06□□□□□ -1.6
TOPBP1-201ENST00000260810 DNTTP04053 509 aa5.06□□□□□ -1.6
TOPBP1-201ENST00000260810 LYNP07948 512 aa5.06□□□□□ -1.6
TOPBP1-201ENST00000260810 SOX6P35712 828 aa5.06□□□□□ -1.6
TOPBP1-201ENST00000260810 GGT2P36268 569 aa5.06□□□□□ -1.6
TOPBP1-201ENST00000260810 ZNF79Q15937 498 aa5.06□□□□□ -1.6
TOPBP1-201ENST00000260810 PDSS1Q5T2R2 415 aa5.06□□□□□ -1.6
TOPBP1-201ENST00000260810 C10orf62Q5T681 223 aaPredicted RBP5.06□□□□□ -1.6
TOPBP1-201ENST00000260810 PODNL1Q6PEZ8 512 aa5.06□□□□□ -1.6
TOPBP1-201ENST00000260810 TTC29Q8NA56 475 aaPredicted RBP5.06□□□□□ -1.6
TOPBP1-201ENST00000260810 PIK3C3Q8NEB9 887 aa5.06□□□□□ -1.6
TOPBP1-201ENST00000260810 OR10G3Q8NGC4 313 aa5.06□□□□□ -1.6
TOPBP1-201ENST00000260810 OR51Q1Q8NH59 317 aa5.06□□□□□ -1.6
TOPBP1-201ENST00000260810 RAD51AP1Q96B01 352 aa5.06□□□□□ -1.6
TOPBP1-201ENST00000260810 ECSITQ9BQ95 431 aa5.06□□□□□ -1.6
TOPBP1-201ENST00000260810 OR51I1Q9H343 314 aa5.06□□□□□ -1.6
TOPBP1-201ENST00000260810 SPAG4Q9NPE6 437 aa5.06□□□□□ -1.6
TOPBP1-201ENST00000260810 FOXD3Q9UJU5 478 aaPredicted RBP5.06□□□□□ -1.6
TOPBP1-201ENST00000260810 A0A0J9YY10 115 aa5.05□□□□□ -1.6
TOPBP1-201ENST00000260810 MED19A0JLT2 244 aaPredicted RBP5.05□□□□□ -1.6
TOPBP1-201ENST00000260810 UPK3AO75631 287 aa5.05□□□□□ -1.6
TOPBP1-201ENST00000260810 PLGP00747 810 aaPredicted RBP5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms