RNA–Protein interactions for RNA: ENST00000239243.6

MSX2-201, Transcript of msh homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX2, Length 2,241 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2-201ENST00000239243 ASXL3Q9C0F0 2248 aa21.41■■□□□ 1.02
MSX2-201ENST00000239243 LOC100506127A0A0U1RQW1 187 aa21.41■■□□□ 1.02
MSX2-201ENST00000239243 ADAM11O75078 769 aa21.41■■□□□ 1.02
MSX2-201ENST00000239243 TBXA2RP21731 343 aa21.41■■□□□ 1.02
MSX2-201ENST00000239243 GAS1P54826 345 aa21.41■■□□□ 1.02
MSX2-201ENST00000239243 C1orf189Q5VU69 101 aa21.41■■□□□ 1.02
MSX2-201ENST00000239243 LINC00114Q6XXX2 140 aa21.41■■□□□ 1.02
MSX2-201ENST00000239243 RABEPKQ7Z6M1 372 aa21.41■■□□□ 1.02
MSX2-201ENST00000239243 ZBTB46Q86UZ6 589 aa21.41■■□□□ 1.02
MSX2-201ENST00000239243 GID4Q8IVV7 300 aa21.41■■□□□ 1.02
MSX2-201ENST00000239243 OR4D9Q8NGE8 314 aa21.41■■□□□ 1.02
MSX2-201ENST00000239243 NAT6Q93015 286 aa21.41■■□□□ 1.02
MSX2-201ENST00000239243 CCNL2Q96S94 520 aaPredicted RBP21.41■■□□□ 1.02
MSX2-201ENST00000239243 COPS7AQ9UBW8 275 aa21.41■■□□□ 1.02
MSX2-201ENST00000239243 IL20RAQ9UHF4 553 aa21.41■■□□□ 1.02
MSX2-201ENST00000239243 BAIAP2Q9UQB8 552 aa21.41■■□□□ 1.02
MSX2-201ENST00000239243 COL5A1P20908 1838 aaPredicted RBP21.41■■□□□ 1.02
MSX2-201ENST00000239243 TMEM129A0AVI4 362 aa21.4■■□□□ 1.02
MSX2-201ENST00000239243 FAM86C2PA6NEL3 165 aa21.4■■□□□ 1.02
MSX2-201ENST00000239243 SCDO00767 359 aa21.4■■□□□ 1.02
MSX2-201ENST00000239243 BHLHE40O14503 412 aa21.4■■□□□ 1.02
MSX2-201ENST00000239243 SIGLEC6O43699 453 aa21.4■■□□□ 1.02
MSX2-201ENST00000239243 ENDOUP21128 410 aaKnown RBP21.4■■□□□ 1.02
MSX2-201ENST00000239243 HTR1FP30939 366 aa21.4■■□□□ 1.02
MSX2-201ENST00000239243 SIGLEC14Q08ET2 396 aa21.4■■□□□ 1.02
MSX2-201ENST00000239243 GDPGP1Q6ZNW5 385 aa21.4■■□□□ 1.02
MSX2-201ENST00000239243 ATCAYQ86WG3 371 aa21.4■■□□□ 1.02
MSX2-201ENST00000239243 AMER2Q8N7J2 671 aa21.4■■□□□ 1.02
MSX2-201ENST00000239243 CHCHD6Q9BRQ6 235 aa21.4■■□□□ 1.02
MSX2-201ENST00000239243 NXF5Q9H1B4 397 aaKnown RBP21.4■■□□□ 1.02
MSX2-201ENST00000239243 LIMK1P53667 647 aa21.4■■□□□ 1.02
MSX2-201ENST00000239243 FXYD6P3P58550 94 aa21.4■■□□□ 1.02
MSX2-201ENST00000239243 PEAR1Q5VY43 1037 aaPredicted RBP21.4■■□□□ 1.02
MSX2-201ENST00000239243 KIRREL2Q6UWL6 708 aa21.4■■□□□ 1.02
MSX2-201ENST00000239243 CACTIN-AS1Q8N1I8 211 aa21.4■■□□□ 1.02
MSX2-201ENST00000239243 ZNF321PQ8N8H1 164 aa21.4■■□□□ 1.02
MSX2-201ENST00000239243 FAM71CQ8NEG0 241 aa21.4■■□□□ 1.02
MSX2-201ENST00000239243 SH3YL1Q96HL8 342 aaPredicted RBP21.4■■□□□ 1.02
MSX2-201ENST00000239243 WDR12Q9GZL7 423 aaKnown RBP21.4■■□□□ 1.02
MSX2-201ENST00000239243 SLIRPQ9GZT3 109 aaKnown RBP21.4■■□□□ 1.02
MSX2-201ENST00000239243 MKL2Q9ULH7 1088 aa21.4■■□□□ 1.02
MSX2-201ENST00000239243 ATXN7L1Q9ULK2 861 aaPredicted RBP21.4■■□□□ 1.02
MSX2-201ENST00000239243 LY6G6EA0A0G2JKS1 128 aa21.39■■□□□ 1.01
MSX2-201ENST00000239243 C2orf92A0A1B0GVN3 265 aa21.39■■□□□ 1.01
MSX2-201ENST00000239243 CLDN25C9JDP6 229 aa21.39■■□□□ 1.01
MSX2-201ENST00000239243 WNT4P56705 351 aa21.39■■□□□ 1.01
MSX2-201ENST00000239243 CSTF1Q05048 431 aaKnown RBP21.39■■□□□ 1.01
MSX2-201ENST00000239243 ZNF846Q147U1 533 aa21.39■■□□□ 1.01
MSX2-201ENST00000239243 SSX1Q16384 188 aa21.39■■□□□ 1.01
MSX2-201ENST00000239243 PERM1Q5SV97 790 aa21.39■■□□□ 1.01
MSX2-201ENST00000239243 PRPF38BQ5VTL8 546 aaKnown RBP21.39■■□□□ 1.01
MSX2-201ENST00000239243 HLA-DQA1Q5Y7H0 255 aa21.39■■□□□ 1.01
MSX2-201ENST00000239243 ZNF574Q6ZN55 896 aaPredicted RBP21.39■■□□□ 1.01
MSX2-201ENST00000239243 CXXC5Q7LFL8 322 aaKnown RBP21.39■■□□□ 1.01
MSX2-201ENST00000239243 OR13C2Q8NGS9 318 aa21.39■■□□□ 1.01
MSX2-201ENST00000239243 ADIPOR1Q96A54 375 aa21.39■■□□□ 1.01
MSX2-201ENST00000239243 TGIF2Q9GZN2 237 aa21.39■■□□□ 1.01
MSX2-201ENST00000239243 VN1R1Q9GZP7 353 aa21.39■■□□□ 1.01
MSX2-201ENST00000239243 EXOSC3Q9NQT5 275 aaKnown RBP21.39■■□□□ 1.01
MSX2-201ENST00000239243 FBXO8Q9NRD0 319 aa21.39■■□□□ 1.01
MSX2-201ENST00000239243 U3KQA8 63 aa21.39■■□□□ 1.01
MSX2-201ENST00000239243 RP1P56715 2156 aa21.39■■□□□ 1.01
MSX2-201ENST00000239243 HBQ1P09105 142 aa21.39■■□□□ 1.01
MSX2-201ENST00000239243 CALRP27797 417 aaKnown RBP21.39■■□□□ 1.01
MSX2-201ENST00000239243 OPRL1P41146 370 aa21.39■■□□□ 1.01
MSX2-201ENST00000239243 OAFQ86UD1 273 aa21.39■■□□□ 1.01
MSX2-201ENST00000239243 PLPP5Q8NEB5 264 aa21.39■■□□□ 1.01
MSX2-201ENST00000239243 IFT27Q9BW83 186 aa21.39■■□□□ 1.01
MSX2-201ENST00000239243 SEC14L4Q9UDX3 406 aa21.39■■□□□ 1.01
MSX2-201ENST00000239243 A3GALT2U3KPV4 340 aa21.39■■□□□ 1.01
MSX2-201ENST00000239243 HTR3EA5X5Y0 456 aa21.38■■□□□ 1.01
MSX2-201ENST00000239243 OR6C76A6NM76 312 aa21.38■■□□□ 1.01
MSX2-201ENST00000239243 PTP4A3O75365 173 aa21.38■■□□□ 1.01
MSX2-201ENST00000239243 CFIP05156 583 aa21.38■■□□□ 1.01
MSX2-201ENST00000239243 UBL4AP11441 157 aa21.38■■□□□ 1.01
MSX2-201ENST00000239243 PSMA1P25786 263 aaKnown RBP21.38■■□□□ 1.01
MSX2-201ENST00000239243 ETV5P41161 510 aa21.38■■□□□ 1.01
MSX2-201ENST00000239243 ETV1P50549 477 aa21.38■■□□□ 1.01
MSX2-201ENST00000239243 RTL4Q6ZR62 310 aa21.38■■□□□ 1.01
MSX2-201ENST00000239243 SLC15A4Q8N697 577 aa21.38■■□□□ 1.01
MSX2-201ENST00000239243 ARSGQ96EG1 525 aa21.38■■□□□ 1.01
MSX2-201ENST00000239243 GAREM1Q9H706 876 aa21.38■■□□□ 1.01
MSX2-201ENST00000239243 ISYNA1Q9NPH2 558 aa21.38■■□□□ 1.01
MSX2-201ENST00000239243 CMC2Q9NRP2 79 aa21.38■■□□□ 1.01
MSX2-201ENST00000239243 A0A087WUJ7 227 aa21.37■■□□□ 1.01
MSX2-201ENST00000239243 RFPL3O75679 317 aa21.37■■□□□ 1.01
MSX2-201ENST00000239243 PPM1BO75688 479 aa21.37■■□□□ 1.01
MSX2-201ENST00000239243 FUT1P19526 365 aa21.37■■□□□ 1.01
MSX2-201ENST00000239243 HOXD12P35452 270 aa21.37■■□□□ 1.01
MSX2-201ENST00000239243 TGFBR1P36897 503 aa21.37■■□□□ 1.01
MSX2-201ENST00000239243 CCL7P80098 99 aa21.37■■□□□ 1.01
MSX2-201ENST00000239243 CRYZQ08257 329 aaKnown RBP21.37■■□□□ 1.01
MSX2-201ENST00000239243 ARMC4Q5T2S8 1044 aa21.37■■□□□ 1.01
MSX2-201ENST00000239243 FNDC7Q5VTL7 733 aa21.37■■□□□ 1.01
MSX2-201ENST00000239243 TMPRSS9Q7Z410 1059 aa21.37■■□□□ 1.01
MSX2-201ENST00000239243 DACH2Q96NX9 599 aa21.37■■□□□ 1.01
MSX2-201ENST00000239243 GAL3ST4Q96RP7 486 aa21.37■■□□□ 1.01
MSX2-201ENST00000239243 LMF1Q96S06 567 aa21.37■■□□□ 1.01
MSX2-201ENST00000239243 NUDT9Q9BW91 350 aa21.37■■□□□ 1.01
MSX2-201ENST00000239243 HINT3Q9NQE9 182 aaKnown RBP21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms