RNA–Protein interactions for RNA: ENST00000225441.11

RUNDC3A-201, Transcript of RUN domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene RUNDC3A, Length 1,821 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-201ENST00000225441 MANEAQ5SRI9 462 aa23.07■■□□□ 1.28
RUNDC3A-201ENST00000225441 FBXO42Q6P3S6 717 aa23.07■■□□□ 1.28
RUNDC3A-201ENST00000225441 TMPRSS11FQ6ZWK6 438 aa23.07■■□□□ 1.28
RUNDC3A-201ENST00000225441 ABHD13Q7L211 337 aa23.07■■□□□ 1.28
RUNDC3A-201ENST00000225441 GATAD2AQ86YP4 633 aa23.07■■□□□ 1.28
RUNDC3A-201ENST00000225441 GPALPP1Q8IXQ4 340 aa23.07■■□□□ 1.28
RUNDC3A-201ENST00000225441 CDRT4Q8N9R6 151 aa23.07■■□□□ 1.28
RUNDC3A-201ENST00000225441 SLC2A12Q8TD20 617 aa23.07■■□□□ 1.28
RUNDC3A-201ENST00000225441 ZFPM2Q8WW38 1151 aa23.07■■□□□ 1.28
RUNDC3A-201ENST00000225441 KCNJ15Q99712 375 aa23.07■■□□□ 1.28
RUNDC3A-201ENST00000225441 TMED9Q9BVK6 235 aa23.07■■□□□ 1.28
RUNDC3A-201ENST00000225441 OR52D1Q9H346 318 aa23.07■■□□□ 1.28
RUNDC3A-201ENST00000225441 SPACA6W5XKT8 324 aa23.07■■□□□ 1.28
RUNDC3A-201ENST00000225441 FANCMQ8IYD8 2048 aa23.06■■□□□ 1.28
RUNDC3A-201ENST00000225441 TRBV23OR9-2A0A075B6M9 112 aa23.06■■□□□ 1.28
RUNDC3A-201ENST00000225441 SLC22A31A6NKX4 558 aa23.06■■□□□ 1.28
RUNDC3A-201ENST00000225441 GTPBP1O00178 669 aaKnown RBP23.06■■□□□ 1.28
RUNDC3A-201ENST00000225441 RNF13O43567 381 aa23.06■■□□□ 1.28
RUNDC3A-201ENST00000225441 NID1P14543 1247 aa23.06■■□□□ 1.28
RUNDC3A-201ENST00000225441 DUSP5Q16690 384 aa23.06■■□□□ 1.28
RUNDC3A-201ENST00000225441 FHL5Q5TD97 284 aa23.06■■□□□ 1.28
RUNDC3A-201ENST00000225441 TPRA1Q86W33 373 aa23.06■■□□□ 1.28
RUNDC3A-201ENST00000225441 AHCYL2Q96HN2 611 aaKnown RBP23.06■■□□□ 1.28
RUNDC3A-201ENST00000225441 OR2A5Q96R48 311 aa23.06■■□□□ 1.28
RUNDC3A-201ENST00000225441 SIDT1Q9NXL6 827 aaKnown RBP23.06■■□□□ 1.28
RUNDC3A-201ENST00000225441 THADAQ6YHU6 1953 aa23.06■■□□□ 1.28
RUNDC3A-201ENST00000225441 FAM25AB3EWG3 89 aa23.05■■□□□ 1.28
RUNDC3A-201ENST00000225441 FAM25CB3EWG5 89 aa23.05■■□□□ 1.28
RUNDC3A-201ENST00000225441 FAM25GB3EWG6 89 aa23.05■■□□□ 1.28
RUNDC3A-201ENST00000225441 TFECO14948 347 aaPredicted RBP23.05■■□□□ 1.28
RUNDC3A-201ENST00000225441 PIP5K1CO60331 668 aa23.05■■□□□ 1.28
RUNDC3A-201ENST00000225441 PLOD3O60568 738 aa23.05■■□□□ 1.28
RUNDC3A-201ENST00000225441 HPGDSO60760 199 aa23.05■■□□□ 1.28
RUNDC3A-201ENST00000225441 APEX1P27695 318 aaKnown RBP23.05■■□□□ 1.28
RUNDC3A-201ENST00000225441 HACD4Q5VWC8 232 aa23.05■■□□□ 1.28
RUNDC3A-201ENST00000225441 VASNQ6EMK4 673 aa23.05■■□□□ 1.28
RUNDC3A-201ENST00000225441 NOXA1Q86UR1 476 aa23.05■■□□□ 1.28
RUNDC3A-201ENST00000225441 GALNT12Q8IXK2 581 aa23.05■■□□□ 1.28
RUNDC3A-201ENST00000225441 SLC7A5P1Q8MH63 180 aa23.05■■□□□ 1.28
RUNDC3A-201ENST00000225441 FANK1Q8TC84 345 aa23.05■■□□□ 1.28
RUNDC3A-201ENST00000225441 TMEM239Q8WW34 195 aa23.05■■□□□ 1.28
RUNDC3A-201ENST00000225441 HDHD5Q9BXW7 423 aa23.05■■□□□ 1.28
RUNDC3A-201ENST00000225441 TRIM36Q9NQ86 728 aa23.05■■□□□ 1.28
RUNDC3A-201ENST00000225441 MDC1Q14676 2089 aaKnown RBP23.05■■□□□ 1.28
RUNDC3A-201ENST00000225441 BHLHE40O14503 412 aa23.05■■□□□ 1.28
RUNDC3A-201ENST00000225441 CDC42EP2O14613 210 aa23.05■■□□□ 1.28
RUNDC3A-201ENST00000225441 HRO43593 1189 aa23.05■■□□□ 1.28
RUNDC3A-201ENST00000225441 ATP1B1P05026 303 aa23.05■■□□□ 1.28
RUNDC3A-201ENST00000225441 CTBP2P56545 445 aa23.05■■□□□ 1.28
RUNDC3A-201ENST00000225441 HOXC5Q00444 222 aa23.05■■□□□ 1.28
RUNDC3A-201ENST00000225441 GALEQ14376 348 aa23.05■■□□□ 1.28
RUNDC3A-201ENST00000225441 ELOCQ15369 112 aa23.05■■□□□ 1.28
RUNDC3A-201ENST00000225441 ZNF791Q3KP31 576 aaPredicted RBP23.05■■□□□ 1.28
RUNDC3A-201ENST00000225441 TMEM91Q6ZNR0 172 aa23.05■■□□□ 1.28
RUNDC3A-201ENST00000225441 KLBQ86Z14 1044 aa23.05■■□□□ 1.28
RUNDC3A-201ENST00000225441 ZFP41Q8N8Y5 198 aa23.05■■□□□ 1.28
RUNDC3A-201ENST00000225441 FLVCR1-AS1Q8TAF5 88 aa23.05■■□□□ 1.28
RUNDC3A-201ENST00000225441 RNF170Q96K19 258 aa23.05■■□□□ 1.28
RUNDC3A-201ENST00000225441 RNF32Q9H0A6 362 aa23.05■■□□□ 1.28
RUNDC3A-201ENST00000225441 NTNG1Q9Y2I2 539 aa23.05■■□□□ 1.28
RUNDC3A-201ENST00000225441 CSNK1G3Q9Y6M4 447 aa23.05■■□□□ 1.28
RUNDC3A-201ENST00000225441 KIR2DS5A0A0G2JLQ3 304 aa23.04■■□□□ 1.28
RUNDC3A-201ENST00000225441 A0A0G2JNG1 304 aa23.04■■□□□ 1.28
RUNDC3A-201ENST00000225441 OR5K4A6NMS3 321 aa23.04■■□□□ 1.28
RUNDC3A-201ENST00000225441 KIR2DS3K7RE56 304 aa23.04■■□□□ 1.28
RUNDC3A-201ENST00000225441 BTN3A3O00478 584 aa23.04■■□□□ 1.28
RUNDC3A-201ENST00000225441 SLC43A1O75387 559 aa23.04■■□□□ 1.28
RUNDC3A-201ENST00000225441 RAB25P57735 213 aa23.04■■□□□ 1.28
RUNDC3A-201ENST00000225441 IL18Q14116 193 aa23.04■■□□□ 1.28
RUNDC3A-201ENST00000225441 KIR2DS5Q14953 304 aa23.04■■□□□ 1.28
RUNDC3A-201ENST00000225441 GARNL3Q5VVW2 1013 aa23.04■■□□□ 1.28
RUNDC3A-201ENST00000225441 HBMQ6B0K9 141 aa23.04■■□□□ 1.28
RUNDC3A-201ENST00000225441 ZNF613Q6PF04 617 aa23.04■■□□□ 1.28
RUNDC3A-201ENST00000225441 SMARCD3Q6STE5 483 aa23.04■■□□□ 1.28
RUNDC3A-201ENST00000225441 BBS1Q8NFJ9 593 aa23.04■■□□□ 1.28
RUNDC3A-201ENST00000225441 LILRB4Q8NHJ6 448 aa23.04■■□□□ 1.28
RUNDC3A-201ENST00000225441 PATE1Q8WXA2 126 aa23.04■■□□□ 1.28
RUNDC3A-201ENST00000225441 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP23.04■■□□□ 1.28
RUNDC3A-201ENST00000225441 CMC2Q9NRP2 79 aa23.04■■□□□ 1.28
RUNDC3A-201ENST00000225441 NCOR1O75376 2440 aa23.04■■□□□ 1.28
RUNDC3A-201ENST00000225441 LINC00854A0A1B0GVQ3 168 aa23.03■■□□□ 1.28
RUNDC3A-201ENST00000225441 SOCS6O14544 535 aa23.03■■□□□ 1.28
RUNDC3A-201ENST00000225441 LYRM1O43325 122 aa23.03■■□□□ 1.28
RUNDC3A-201ENST00000225441 SCO2O43819 266 aa23.03■■□□□ 1.28
RUNDC3A-201ENST00000225441 LYPD3O95274 346 aa23.03■■□□□ 1.28
RUNDC3A-201ENST00000225441 ZGLP1P0C6A0 271 aa23.03■■□□□ 1.28
RUNDC3A-201ENST00000225441 FAM157BP0CG42 384 aa23.03■■□□□ 1.28
RUNDC3A-201ENST00000225441 TCEA1P23193 301 aaKnown RBP23.03■■□□□ 1.28
RUNDC3A-201ENST00000225441 RCVRNP35243 200 aa23.03■■□□□ 1.28
RUNDC3A-201ENST00000225441 CLDN20P56880 219 aa23.03■■□□□ 1.28
RUNDC3A-201ENST00000225441 RUNX2Q13950 521 aa23.03■■□□□ 1.28
RUNDC3A-201ENST00000225441 OR1Q1Q15612 314 aa23.03■■□□□ 1.28
RUNDC3A-201ENST00000225441 DCST2Q5T1A1 773 aa23.03■■□□□ 1.28
RUNDC3A-201ENST00000225441 TRILQ7L0X0 811 aa23.03■■□□□ 1.28
RUNDC3A-201ENST00000225441 BMP8AQ7Z5Y6 402 aa23.03■■□□□ 1.28
RUNDC3A-201ENST00000225441 LRRC28Q86X40 367 aaPredicted RBP23.03■■□□□ 1.28
RUNDC3A-201ENST00000225441 TRIM48Q8IWZ4 208 aa23.03■■□□□ 1.28
RUNDC3A-201ENST00000225441 LMX1AQ8TE12 382 aa23.03■■□□□ 1.28
RUNDC3A-201ENST00000225441 COL26A1Q96A83 441 aa23.03■■□□□ 1.28
RUNDC3A-201ENST00000225441 ZNF559Q9BR84 538 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms