RNA–Protein interactions for RNA: ENST00000053243.5

TNFRSF17-201, Transcript of TNF receptor superfamily member 17, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TNFRSF17, Length 994 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF17-201ENST00000053243 TMED1Q13445 227 aa5.91□□□□□ -1.46
TNFRSF17-201ENST00000053243 DCTN2Q13561 401 aaKnown RBP5.91□□□□□ -1.46
TNFRSF17-201ENST00000053243 FGFBP1Q14512 234 aa5.91□□□□□ -1.46
TNFRSF17-201ENST00000053243 DEFB133Q30KQ1 61 aa5.91□□□□□ -1.46
TNFRSF17-201ENST00000053243 DEFB110Q30KQ9 67 aa5.91□□□□□ -1.46
TNFRSF17-201ENST00000053243 TIMM50Q3ZCQ8 353 aa5.91□□□□□ -1.46
TNFRSF17-201ENST00000053243 ARMC4Q5T2S8 1044 aa5.91□□□□□ -1.46
TNFRSF17-201ENST00000053243 MRPL2Q5T653 305 aaKnown RBP5.91□□□□□ -1.46
TNFRSF17-201ENST00000053243 PMS2CLQ68D20 193 aa5.91□□□□□ -1.46
TNFRSF17-201ENST00000053243 ZNF730Q6ZMV8 503 aa5.91□□□□□ -1.46
TNFRSF17-201ENST00000053243 ZNF620Q6ZNG0 422 aa5.91□□□□□ -1.46
TNFRSF17-201ENST00000053243 GDPGP1Q6ZNW5 385 aa5.91□□□□□ -1.46
TNFRSF17-201ENST00000053243 Q6ZPB1 254 aaPredicted RBP5.91□□□□□ -1.46
TNFRSF17-201ENST00000053243 TMPRSS11FQ6ZWK6 438 aa5.91□□□□□ -1.46
TNFRSF17-201ENST00000053243 TUBA1AQ71U36 451 aa5.91□□□□□ -1.46
TNFRSF17-201ENST00000053243 RRM2BQ7LG56 351 aa5.91□□□□□ -1.46
TNFRSF17-201ENST00000053243 ZNF550Q7Z398 422 aa5.91□□□□□ -1.46
TNFRSF17-201ENST00000053243 NUP54Q7Z3B4 507 aa5.91□□□□□ -1.46
TNFRSF17-201ENST00000053243 THNSL2Q86YJ6 484 aa5.91□□□□□ -1.46
TNFRSF17-201ENST00000053243 ZNF440Q8IYI8 595 aa5.91□□□□□ -1.46
TNFRSF17-201ENST00000053243 CLIP4Q8N3C7 705 aa5.91□□□□□ -1.46
TNFRSF17-201ENST00000053243 STX19Q8N4C7 294 aa5.91□□□□□ -1.46
TNFRSF17-201ENST00000053243 ZNF615Q8N8J6 731 aa5.91□□□□□ -1.46
TNFRSF17-201ENST00000053243 B3GNT7Q8NFL0 401 aa5.91□□□□□ -1.46
TNFRSF17-201ENST00000053243 OR52R1Q8NGF1 315 aa5.91□□□□□ -1.46
TNFRSF17-201ENST00000053243 TEX47Q8TBZ9 253 aa5.91□□□□□ -1.46
TNFRSF17-201ENST00000053243 BRIX1Q8TDN6 353 aaKnown RBP5.91□□□□□ -1.46
TNFRSF17-201ENST00000053243 GPR151Q8TDV0 419 aa5.91□□□□□ -1.46
TNFRSF17-201ENST00000053243 GAB3Q8WWW8 586 aa5.91□□□□□ -1.46
TNFRSF17-201ENST00000053243 RIT1Q92963 219 aa5.91□□□□□ -1.46
TNFRSF17-201ENST00000053243 ZG16BQ96DA0 208 aa5.91□□□□□ -1.46
TNFRSF17-201ENST00000053243 VMP1Q96GC9 406 aa5.91□□□□□ -1.46
TNFRSF17-201ENST00000053243 SLC41A3Q96GZ6 507 aa5.91□□□□□ -1.46
TNFRSF17-201ENST00000053243 RBM18Q96H35 190 aaKnown RBP5.91□□□□□ -1.46
TNFRSF17-201ENST00000053243 ART5Q96L15 291 aa5.91□□□□□ -1.46
TNFRSF17-201ENST00000053243 DGAT2Q96PD7 388 aa5.91□□□□□ -1.46
TNFRSF17-201ENST00000053243 SLC38A2Q96QD8 506 aa5.91□□□□□ -1.46
TNFRSF17-201ENST00000053243 ELF4Q99607 663 aaPredicted RBP5.91□□□□□ -1.46
TNFRSF17-201ENST00000053243 SH3GL3Q99963 347 aa5.91□□□□□ -1.46
TNFRSF17-201ENST00000053243 PRSS27Q9BQR3 290 aa5.91□□□□□ -1.46
TNFRSF17-201ENST00000053243 ZNF559Q9BR84 538 aa5.91□□□□□ -1.46
TNFRSF17-201ENST00000053243 ZNF426Q9BUY5 554 aa5.91□□□□□ -1.46
TNFRSF17-201ENST00000053243 JAM3Q9BX67 310 aa5.91□□□□□ -1.46
TNFRSF17-201ENST00000053243 TRIM2Q9C040 744 aa5.91□□□□□ -1.46
TNFRSF17-201ENST00000053243 HOXD1Q9GZZ0 328 aa5.91□□□□□ -1.46
TNFRSF17-201ENST00000053243 NAA50Q9GZZ1 169 aaKnown RBP5.91□□□□□ -1.46
TNFRSF17-201ENST00000053243 QRSL1Q9H0R6 528 aaKnown RBP5.91□□□□□ -1.46
TNFRSF17-201ENST00000053243 FN3KQ9H479 309 aa5.91□□□□□ -1.46
TNFRSF17-201ENST00000053243 ANKRA2Q9H9E1 313 aa5.91□□□□□ -1.46
TNFRSF17-201ENST00000053243 SIAEQ9HAT2 523 aa5.91□□□□□ -1.46
TNFRSF17-201ENST00000053243 Q9N2J8 555 aa5.91□□□□□ -1.46
TNFRSF17-201ENST00000053243 FGF20Q9NP95 211 aaPredicted RBP5.91□□□□□ -1.46
TNFRSF17-201ENST00000053243 ISYNA1Q9NPH2 558 aa5.91□□□□□ -1.46
TNFRSF17-201ENST00000053243 LANCL2Q9NS86 450 aa5.91□□□□□ -1.46
TNFRSF17-201ENST00000053243 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.91□□□□□ -1.46
TNFRSF17-201ENST00000053243 SOHLH2Q9NX45 425 aa5.91□□□□□ -1.46
TNFRSF17-201ENST00000053243 LRIT1Q9P2V4 623 aa5.91□□□□□ -1.46
TNFRSF17-201ENST00000053243 WARS2Q9UGM6 360 aaKnown RBP5.91□□□□□ -1.46
TNFRSF17-201ENST00000053243 ZNF223Q9UK11 482 aaPredicted RBP5.91□□□□□ -1.46
TNFRSF17-201ENST00000053243 DIMT1Q9UNQ2 313 aaKnown RBP5.91□□□□□ -1.46
TNFRSF17-201ENST00000053243 SRPK3Q9UPE1 567 aa5.91□□□□□ -1.46
TNFRSF17-201ENST00000053243 BAIAP2Q9UQB8 552 aa5.91□□□□□ -1.46
TNFRSF17-201ENST00000053243 CFL2Q9Y281 166 aa5.91□□□□□ -1.46
TNFRSF17-201ENST00000053243 CDH10Q9Y6N8 788 aa5.91□□□□□ -1.46
TNFRSF17-201ENST00000053243 CPAMD8Q8IZJ3 1885 aa5.9□□□□□ -1.46
TNFRSF17-201ENST00000053243 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.9□□□□□ -1.46
TNFRSF17-201ENST00000053243 A0A0B4J2E0 115 aa5.9□□□□□ -1.46
TNFRSF17-201ENST00000053243 A0A1B0GTQ1 180 aa5.9□□□□□ -1.46
TNFRSF17-201ENST00000053243 A0A1B0GX12 115 aa5.9□□□□□ -1.46
TNFRSF17-201ENST00000053243 CPSF4LA6NMK7 179 aaKnown RBP5.9□□□□□ -1.46
TNFRSF17-201ENST00000053243 EFCAB7A8K855 629 aa5.9□□□□□ -1.46
TNFRSF17-201ENST00000053243 TMEM150CB9EJG8 249 aa5.9□□□□□ -1.46
TNFRSF17-201ENST00000053243 POLR1CO15160 346 aaPredicted RBP5.9□□□□□ -1.46
TNFRSF17-201ENST00000053243 OR2B3O76000 313 aa5.9□□□□□ -1.46
TNFRSF17-201ENST00000053243 LYPD3O95274 346 aa5.9□□□□□ -1.46
TNFRSF17-201ENST00000053243 ONECUT2O95948 504 aa5.9□□□□□ -1.46
TNFRSF17-201ENST00000053243 CLPSP04118 112 aa5.9□□□□□ -1.46
TNFRSF17-201ENST00000053243 THY1P04216 161 aa5.9□□□□□ -1.46
TNFRSF17-201ENST00000053243 HMGN1P05114 100 aa5.9□□□□□ -1.46
TNFRSF17-201ENST00000053243 CD8BP10966 210 aa5.9□□□□□ -1.46
TNFRSF17-201ENST00000053243 DBTP11182 482 aaKnown RBP5.9□□□□□ -1.46
TNFRSF17-201ENST00000053243 PSMB9P28065 219 aa5.9□□□□□ -1.46
TNFRSF17-201ENST00000053243 EPHA8P29322 1005 aaPredicted RBP5.9□□□□□ -1.46
TNFRSF17-201ENST00000053243 CSTF2P33240 577 aaKnown RBP eCLIP5.9□□□□□ -1.46
TNFRSF17-201ENST00000053243 GABRA3P34903 492 aa5.9□□□□□ -1.46
TNFRSF17-201ENST00000053243 GRK5P34947 590 aa5.9□□□□□ -1.46
TNFRSF17-201ENST00000053243 RORAP35398 523 aa5.9□□□□□ -1.46
TNFRSF17-201ENST00000053243 CSNK1EP49674 416 aaKnown RBP5.9□□□□□ -1.46
TNFRSF17-201ENST00000053243 ATP12AP54707 1039 aa5.9□□□□□ -1.46
TNFRSF17-201ENST00000053243 DCAF7P61962 342 aa5.9□□□□□ -1.46
TNFRSF17-201ENST00000053243 ZNF91Q05481 1191 aa5.9□□□□□ -1.46
TNFRSF17-201ENST00000053243 PRKCDQ05655 676 aa5.9□□□□□ -1.46
TNFRSF17-201ENST00000053243 PIGFQ07326 219 aa5.9□□□□□ -1.46
TNFRSF17-201ENST00000053243 RAB40BQ12829 278 aa5.9□□□□□ -1.46
TNFRSF17-201ENST00000053243 IKZF1Q13422 519 aa5.9□□□□□ -1.46
TNFRSF17-201ENST00000053243 GINS1Q14691 196 aa5.9□□□□□ -1.46
TNFRSF17-201ENST00000053243 EXOSC7Q15024 291 aaKnown RBP5.9□□□□□ -1.46
TNFRSF17-201ENST00000053243 SHBQ15464 509 aa5.9□□□□□ -1.46
TNFRSF17-201ENST00000053243 ELAVL1Q15717 326 aaKnown RBP5.9□□□□□ -1.46
TNFRSF17-201ENST00000053243 GPR68Q15743 365 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms