RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 Rnf121Q8R1Z9 327 aa9.69□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Tmem45bQ8VCZ2 278 aa9.69□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Spred2Q924S7 410 aa9.69□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Ttc9bQ9D6E4 239 aa9.69□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Fgf21Q9JJN1 210 aa9.69□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Vmn2r91E9Q2U5 856 aa9.69□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Vmn2r92L7N2A4 860 aa9.69□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Atp1b1P14094 304 aaKnown RBP9.69□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 RpiaP47968 303 aa9.69□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Atf7ip2Q3UL97 452 aa9.69□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Grhl3Q5FWH3 603 aa9.69□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Clrn3Q8BHH8 226 aa9.69□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Cox15Q8BJ03 413 aa9.69□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Dlec1Q8BLA1 635 aa9.69□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Lats1Q8BYR2 1129 aa9.69□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Fam25cQ8CF02 89 aa9.69□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Olfr160Q8VGE3 309 aa9.69□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Sacm1lQ9EP69 587 aa9.69□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Vmn2r98E9PZ56 857 aa9.69□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Olfr730E9Q8M3 318 aa9.69□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 H2-T23P06339 357 aa9.69□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Hoxd8P23463 289 aa9.69□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Gja4P28235 333 aa9.69□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Adamts8P57110 905 aa9.69□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Prelid2Q0VBB0 177 aa9.69□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Fam117bQ3U3E2 584 aa9.69□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Dusp23Q6NT99 150 aa9.69□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Olfr270Q7TS19 314 aa9.69□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Il23rQ8K4B4 644 aa9.69□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Olfr1263Q8VG63 306 aa9.69□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 LhppQ9D7I5 270 aa9.69□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Stpg4Q9DAG5 247 aa9.69□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Cdc20Q9JJ66 499 aa9.69□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Acox1Q9R0H0 661 aaKnown RBP9.69□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Akirin2B1AXD8 201 aa9.68□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Gm6803J3QPI8 144 aa9.68□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Cbfa2t3O54972 620 aa9.68□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 HbaP01942 142 aa9.68□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 KitlgP20826 273 aa9.68□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Pou3f4P62515 361 aa9.68□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Malt1Q2TBA3 832 aa9.68□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Crtc2Q3U182 692 aa9.68□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Slc44a5Q5RJI2 710 aa9.68□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Zik1Q80YP6 463 aa9.68□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Poldip3Q8BG81 420 aaKnown RBP9.68□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Znf689Q8BKK5 500 aa9.68□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 NagsQ8R4H7 527 aa9.68□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Abhd4Q8VD66 342 aa9.68□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Neurl2Q9D0S4 285 aa9.68□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Tex19.2Q9D5S1 317 aa9.68□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 MNCb-2990Q9JJ93 142 aa9.68□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 ClnkQ9QZE2 435 aa9.68□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Aadacl2B2RWD2 401 aa9.68□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Pot1bH7BX60 640 aa9.68□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Klrb1cP27814 223 aa9.68□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 HgfQ08048 728 aa9.68□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Ccdc69Q3TCJ8 202 aa9.68□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Gcnt7Q3V3K7 433 aa9.68□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 SpicQ6P3D7 242 aa9.68□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Tm7sf2Q71KT5 418 aa9.68□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Olfr714Q7TRN0 317 aa9.68□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Tmbim1Q8BJZ3 309 aa9.68□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Tmem200aQ8C817 491 aa9.68□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Cnppd1Q8K158 407 aa9.68□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Olfr161Q8VGB9 313 aa9.68□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Cwh43Q91YL7 699 aa9.68□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Mfsd1Q9DC37 464 aa9.68□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 GabarapQ9DCD6 117 aa9.68□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Tas2r103Q9JKA3 312 aa9.68□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Klhl15A2AAX3 604 aa9.68□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Vmn2r109K7N747 858 aa9.68□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Vmn1r16K7N775 303 aa9.68□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Cyp2j5O54749 501 aa9.68□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Timp2P25785 220 aa9.68□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Sox3P53784 375 aa9.68□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 EvlP70429 414 aa9.68□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Map3k8Q07174 467 aa9.68□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Olfr1136Q0VBI4 310 aa9.68□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 2610318N02RikQ80VT5 305 aa9.68□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Zfp790Q80ZX2 779 aa9.68□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 AardQ811W1 167 aa9.68□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Vmn1r81Q8R286 306 aa9.68□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Usb1Q91W78 267 aa9.68□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 MallQ91X49 154 aa9.68□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Cts7Q91ZF2 331 aa9.68□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Macrod1Q922B1 323 aa9.68□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Q9CPZ3 230 aa9.68□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Efcab11Q9D0E5 162 aa9.68□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 EurlQ9D7G4 290 aa9.68□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Gm13283A0A087WPG5 182 aa9.68□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Cela3aA2A9U8 283 aa9.68□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Zfp934K7N6H3 473 aa9.68□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Capns1O88456 269 aa9.68□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Ifi204P0DOV2 619 aa9.68□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Rab11bP46638 218 aa9.68□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Slc9a3r1P70441 355 aa9.68□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Apoc2Q05020 97 aa9.68□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 CcnjQ3TZI6 379 aa9.68□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Frg2f1Q6P3A2 227 aa9.68□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 JamlQ80UL9 379 aa9.68□□□□□ -0.86
Retrieved 100 of 22,080 RNA–protein pairs in 56.9 ms