RNA–Protein interactions for RNA: ENST00000641074.1

PHGDH-209, Transcript of phosphoglycerate dehydrogenase, humanhuman

BASIC

Gene PHGDH, Length 1,780 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-209ENST00000641074 PSPHP78330 225 aa16.74■□□□□ 0.27
PHGDH-209ENST00000641074 RTN4RQ9BZR6 473 aa16.74■□□□□ 0.27
PHGDH-209ENST00000641074 ZBTB20Q9HC78 741 aaPredicted RBP16.74■□□□□ 0.27
PHGDH-209ENST00000641074 RNF6Q9Y252 685 aa16.74■□□□□ 0.27
PHGDH-209ENST00000641074 HS3ST3B1Q9Y662 390 aa16.74■□□□□ 0.27
PHGDH-209ENST00000641074 IGHV1-45A0A0A0MS14 117 aa16.73■□□□□ 0.27
PHGDH-209ENST00000641074 H3BN98 237 aa16.73■□□□□ 0.27
PHGDH-209ENST00000641074 WWP2O00308 870 aa16.73■□□□□ 0.27
PHGDH-209ENST00000641074 GSTM3P21266 225 aa16.73■□□□□ 0.27
PHGDH-209ENST00000641074 FOLR3P41439 243 aa16.73■□□□□ 0.27
PHGDH-209ENST00000641074 NRG3P56975 720 aa16.73■□□□□ 0.27
PHGDH-209ENST00000641074 ALDH6A1Q02252 535 aaKnown RBP16.73■□□□□ 0.27
PHGDH-209ENST00000641074 TSPAN31Q12999 210 aa16.73■□□□□ 0.27
PHGDH-209ENST00000641074 SKP2Q13309 424 aa16.73■□□□□ 0.27
PHGDH-209ENST00000641074 C3orf38Q5JPI3 329 aa16.73■□□□□ 0.27
PHGDH-209ENST00000641074 CBLN3Q6UW01 205 aa16.73■□□□□ 0.27
PHGDH-209ENST00000641074 ZNF440Q8IYI8 595 aa16.73■□□□□ 0.27
PHGDH-209ENST00000641074 CADM2Q8N3J6 435 aa16.73■□□□□ 0.27
PHGDH-209ENST00000641074 OR5L2Q8NGL0 311 aa16.73■□□□□ 0.27
PHGDH-209ENST00000641074 TMEM239Q8WW34 195 aa16.73■□□□□ 0.27
PHGDH-209ENST00000641074 ZNF700Q9H0M5 742 aa16.73■□□□□ 0.27
PHGDH-209ENST00000641074 POLR1BQ9H9Y6 1135 aa16.73■□□□□ 0.27
PHGDH-209ENST00000641074 FOXJ2Q9P0K8 574 aa16.73■□□□□ 0.27
PHGDH-209ENST00000641074 CARD8Q9Y2G2 431 aa16.73■□□□□ 0.27
PHGDH-209ENST00000641074 NPFFR2Q9Y5X5 522 aa16.73■□□□□ 0.27
PHGDH-209ENST00000641074 OR6C70A6NIJ9 312 aa16.72■□□□□ 0.27
PHGDH-209ENST00000641074 GTPBP1O00178 669 aaKnown RBP16.72■□□□□ 0.27
PHGDH-209ENST00000641074 SLC1A7O00341 560 aa16.72■□□□□ 0.27
PHGDH-209ENST00000641074 ZNF264O43296 627 aa16.72■□□□□ 0.27
PHGDH-209ENST00000641074 KLF4O43474 513 aa16.72■□□□□ 0.27
PHGDH-209ENST00000641074 CHP2O43745 196 aa16.72■□□□□ 0.27
PHGDH-209ENST00000641074 ZFAND5O76080 213 aa16.72■□□□□ 0.27
PHGDH-209ENST00000641074 ANGPTL1O95841 491 aa16.72■□□□□ 0.27
PHGDH-209ENST00000641074 NGFRP08138 427 aa16.72■□□□□ 0.27
PHGDH-209ENST00000641074 FMO3P31513 532 aa16.72■□□□□ 0.27
PHGDH-209ENST00000641074 GPR4P46093 362 aa16.72■□□□□ 0.27
PHGDH-209ENST00000641074 HLCSP50747 726 aa16.72■□□□□ 0.27
PHGDH-209ENST00000641074 KIRREL2Q6UWL6 708 aa16.72■□□□□ 0.27
PHGDH-209ENST00000641074 KIF18BQ86Y91 864 aa16.72■□□□□ 0.27
PHGDH-209ENST00000641074 POGLUT1Q8NBL1 392 aa16.72■□□□□ 0.27
PHGDH-209ENST00000641074 BPIFB6Q8NFQ5 453 aa16.72■□□□□ 0.27
PHGDH-209ENST00000641074 WDR36Q8NI36 951 aaKnown RBP16.72■□□□□ 0.27
PHGDH-209ENST00000641074 CT55Q8WUE5 264 aa16.72■□□□□ 0.27
PHGDH-209ENST00000641074 APH1BQ8WW43 257 aa16.72■□□□□ 0.27
PHGDH-209ENST00000641074 A0A087WXM4 84 aa16.72■□□□□ 0.27
PHGDH-209ENST00000641074 ALG1L2C9J202 215 aa16.72■□□□□ 0.27
PHGDH-209ENST00000641074 WBP4O75554 376 aaKnown RBP16.72■□□□□ 0.27
PHGDH-209ENST00000641074 PPM1BO75688 479 aa16.72■□□□□ 0.27
PHGDH-209ENST00000641074 NADKO95544 446 aaPredicted RBP16.72■□□□□ 0.27
PHGDH-209ENST00000641074 CD63P08962 238 aa16.72■□□□□ 0.27
PHGDH-209ENST00000641074 COX6A1P12074 109 aa16.72■□□□□ 0.27
PHGDH-209ENST00000641074 TCN2P20062 427 aa16.72■□□□□ 0.27
PHGDH-209ENST00000641074 FPR3P25089 353 aa16.72■□□□□ 0.27
PHGDH-209ENST00000641074 TUBA4AP68366 448 aa16.72■□□□□ 0.27
PHGDH-209ENST00000641074 TOP3AQ13472 1001 aaPredicted RBP16.72■□□□□ 0.27
PHGDH-209ENST00000641074 BTBD16Q32M84 506 aa16.72■□□□□ 0.27
PHGDH-209ENST00000641074 ALG10BQ5I7T1 473 aa16.72■□□□□ 0.27
PHGDH-209ENST00000641074 TMEM164Q5U3C3 297 aa16.72■□□□□ 0.27
PHGDH-209ENST00000641074 MARCH3Q86UD3 253 aa16.72■□□□□ 0.27
PHGDH-209ENST00000641074 RNF113BQ8IZP6 322 aaKnown RBP16.72■□□□□ 0.27
PHGDH-209ENST00000641074 DEPDC4Q8N2C3 294 aa16.72■□□□□ 0.27
PHGDH-209ENST00000641074 PFN4Q8NHR9 129 aa16.72■□□□□ 0.27
PHGDH-209ENST00000641074 RHOXF1Q8NHV9 184 aa16.72■□□□□ 0.27
PHGDH-209ENST00000641074 ELP5Q8TE02 316 aa16.72■□□□□ 0.27
PHGDH-209ENST00000641074 IMMP1LQ96LU5 166 aa16.72■□□□□ 0.27
PHGDH-209ENST00000641074 DSN1Q9H410 356 aa16.72■□□□□ 0.27
PHGDH-209ENST00000641074 EXOSC3Q9NQT5 275 aaKnown RBP16.72■□□□□ 0.27
PHGDH-209ENST00000641074 ZNF226Q9NYT6 803 aa16.72■□□□□ 0.27
PHGDH-209ENST00000641074 HEATR5AQ86XA9 2040 aa16.71■□□□□ 0.27
PHGDH-209ENST00000641074 A0A1W2PQD3 144 aa16.71■□□□□ 0.27
PHGDH-209ENST00000641074 TRIM64CA6NLI5 447 aa16.71■□□□□ 0.27
PHGDH-209ENST00000641074 M0R129 80 aa16.71■□□□□ 0.27
PHGDH-209ENST00000641074 XPNPEP2O43895 674 aa16.71■□□□□ 0.27
PHGDH-209ENST00000641074 LINGO3P0C6S8 592 aa16.71■□□□□ 0.27
PHGDH-209ENST00000641074 CDK4P11802 303 aa16.71■□□□□ 0.27
PHGDH-209ENST00000641074 EEF1B2P24534 225 aaKnown RBP16.71■□□□□ 0.27
PHGDH-209ENST00000641074 RPL5P46777 297 aaKnown RBP16.71■□□□□ 0.27
PHGDH-209ENST00000641074 RPS18P62269 152 aaKnown RBP16.71■□□□□ 0.27
PHGDH-209ENST00000641074 SMN1Q16637 294 aaKnown RBP16.71■□□□□ 0.27
PHGDH-209ENST00000641074 SLX4IPQ5VYV7 408 aa16.71■□□□□ 0.27
PHGDH-209ENST00000641074 ULK3Q6PHR2 472 aa16.71■□□□□ 0.27
PHGDH-209ENST00000641074 SGCDQ92629 289 aa16.71■□□□□ 0.27
PHGDH-209ENST00000641074 ZNF566Q969W8 418 aa16.71■□□□□ 0.27
PHGDH-209ENST00000641074 TBL1XR1Q9BZK7 514 aa16.71■□□□□ 0.27
PHGDH-209ENST00000641074 EGLN3Q9H6Z9 239 aa16.71■□□□□ 0.27
PHGDH-209ENST00000641074 IMPAD1Q9NX62 359 aa16.71■□□□□ 0.27
PHGDH-209ENST00000641074 TUBA8Q9NY65 449 aaPredicted RBP16.71■□□□□ 0.27
PHGDH-209ENST00000641074 MYOTQ9UBF9 498 aa16.71■□□□□ 0.27
PHGDH-209ENST00000641074 RPS6KB2Q9UBS0 482 aa16.71■□□□□ 0.27
PHGDH-209ENST00000641074 TCFL5Q9UL49 500 aa16.71■□□□□ 0.27
PHGDH-209ENST00000641074 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.7■□□□□ 0.26
PHGDH-209ENST00000641074 SPAARA0A1B0GVQ0 90 aa16.7■□□□□ 0.26
PHGDH-209ENST00000641074 KPNA4O00629 521 aaPredicted RBP16.7■□□□□ 0.26
PHGDH-209ENST00000641074 NDUFB5O43674 189 aa16.7■□□□□ 0.26
PHGDH-209ENST00000641074 FADS1O60427 444 aa16.7■□□□□ 0.26
PHGDH-209ENST00000641074 FOXD2O60548 495 aaPredicted RBP16.7■□□□□ 0.26
PHGDH-209ENST00000641074 DKK1O94907 266 aa16.7■□□□□ 0.26
PHGDH-209ENST00000641074 OR6B1O95007 311 aa16.7■□□□□ 0.26
PHGDH-209ENST00000641074 CCDC159P0C7I6 412 aa16.7■□□□□ 0.26
PHGDH-209ENST00000641074 GABRB1P18505 474 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms