RNA–Protein interactions for RNA: ENST00000638009.1

CACNA1A-257, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,665 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-257ENST00000638009 SLC35F3Q8IY50 421 aa18.3■□□□□ 0.52
CACNA1A-257ENST00000638009 OR4E2Q8NGC2 313 aa18.3■□□□□ 0.52
CACNA1A-257ENST00000638009 DTLQ9NZJ0 730 aa18.3■□□□□ 0.52
CACNA1A-257ENST00000638009 NUP98P52948 1817 aa18.3■□□□□ 0.52
CACNA1A-257ENST00000638009 SPO11Q9Y5K1 396 aa18.3■□□□□ 0.52
CACNA1A-257ENST00000638009 KIF13BQ9NQT8 1826 aa18.3■□□□□ 0.52
CACNA1A-257ENST00000638009 TTC24A2A3L6 582 aaPredicted RBP18.3■□□□□ 0.52
CACNA1A-257ENST00000638009 FAM159BA6NKW6 160 aa18.3■□□□□ 0.52
CACNA1A-257ENST00000638009 ZNF28P17035 718 aa18.3■□□□□ 0.52
CACNA1A-257ENST00000638009 AMTP48728 403 aa18.3■□□□□ 0.52
CACNA1A-257ENST00000638009 HSF1Q00613 529 aa18.3■□□□□ 0.52
CACNA1A-257ENST00000638009 PKDREJQ9NTG1 2253 aa18.3■□□□□ 0.52
CACNA1A-257ENST00000638009 NPIPA5A0A0B4J1W7 369 aa18.3■□□□□ 0.52
CACNA1A-257ENST00000638009 TIA1P31483 386 aaKnown RBP eCLIP18.3■□□□□ 0.52
CACNA1A-257ENST00000638009 RPS18P62269 152 aaKnown RBP18.3■□□□□ 0.52
CACNA1A-257ENST00000638009 CHRNEQ04844 493 aa18.3■□□□□ 0.52
CACNA1A-257ENST00000638009 Q1RN00 199 aa18.3■□□□□ 0.52
CACNA1A-257ENST00000638009 KLHDC8BQ8IXV7 354 aa18.3■□□□□ 0.52
CACNA1A-257ENST00000638009 LINC01599Q8WXQ3 324 aa18.3■□□□□ 0.52
CACNA1A-257ENST00000638009 IL17RBQ9NRM6 502 aa18.3■□□□□ 0.52
CACNA1A-257ENST00000638009 GABRA2P47869 451 aa18.3■□□□□ 0.52
CACNA1A-257ENST00000638009 WDR5BQ86VZ2 330 aa18.3■□□□□ 0.52
CACNA1A-257ENST00000638009 TTTY10Q9BZA0 68 aa18.3■□□□□ 0.52
CACNA1A-257ENST00000638009 PURGQ9UJV8 347 aaKnown RBP18.3■□□□□ 0.52
CACNA1A-257ENST00000638009 METTL15A6NJ78 407 aa18.3■□□□□ 0.52
CACNA1A-257ENST00000638009 UGDHO60701 494 aa18.3■□□□□ 0.52
CACNA1A-257ENST00000638009 LCATP04180 440 aa18.3■□□□□ 0.52
CACNA1A-257ENST00000638009 RPS5P46782 204 aaKnown RBP18.3■□□□□ 0.52
CACNA1A-257ENST00000638009 DGKEP52429 567 aa18.3■□□□□ 0.52
CACNA1A-257ENST00000638009 C9orf131Q5VYM1 1079 aa18.3■□□□□ 0.52
CACNA1A-257ENST00000638009 LMF1Q96S06 567 aa18.3■□□□□ 0.52
CACNA1A-257ENST00000638009 MYOFQ9NZM1 2061 aa18.29■□□□□ 0.52
CACNA1A-257ENST00000638009 ARHGEF15O94989 841 aa18.29■□□□□ 0.52
CACNA1A-257ENST00000638009 AADACP22760 399 aa18.29■□□□□ 0.52
CACNA1A-257ENST00000638009 CALCRP30988 508 aa18.29■□□□□ 0.52
CACNA1A-257ENST00000638009 OR51A7Q8NH64 312 aa18.29■□□□□ 0.52
CACNA1A-257ENST00000638009 PRAP1Q96NZ9 151 aa18.29■□□□□ 0.52
CACNA1A-257ENST00000638009 MCTS1Q9ULC4 181 aaKnown RBP18.29■□□□□ 0.52
CACNA1A-257ENST00000638009 BLACEA4D250 179 aa18.29■□□□□ 0.52
CACNA1A-257ENST00000638009 TRAPPC2P0DI81 140 aa18.29■□□□□ 0.52
CACNA1A-257ENST00000638009 TRAPPC2BP0DI82 140 aa18.29■□□□□ 0.52
CACNA1A-257ENST00000638009 MANEALQ5VSG8 457 aa18.29■□□□□ 0.52
CACNA1A-257ENST00000638009 DMBX1Q8NFW5 382 aa18.29■□□□□ 0.52
CACNA1A-257ENST00000638009 OR10Q1Q8NGQ4 319 aa18.29■□□□□ 0.52
CACNA1A-257ENST00000638009 TTYH3Q9C0H2 523 aa18.29■□□□□ 0.52
CACNA1A-257ENST00000638009 MEIOCA2RUB1 952 aa18.29■□□□□ 0.52
CACNA1A-257ENST00000638009 ITGB8P26012 769 aa18.29■□□□□ 0.52
CACNA1A-257ENST00000638009 CLCNKBP51801 687 aa18.29■□□□□ 0.52
CACNA1A-257ENST00000638009 ZNF33BQ06732 778 aa18.29■□□□□ 0.52
CACNA1A-257ENST00000638009 CMPK2Q5EBM0 449 aa18.29■□□□□ 0.52
CACNA1A-257ENST00000638009 FBXW12Q6X9E4 464 aa18.29■□□□□ 0.52
CACNA1A-257ENST00000638009 ASPGQ86U10 573 aa18.29■□□□□ 0.52
CACNA1A-257ENST00000638009 SLC23A2Q9UGH3 650 aa18.29■□□□□ 0.52
CACNA1A-257ENST00000638009 SUSD5O60279 629 aa18.29■□□□□ 0.52
CACNA1A-257ENST00000638009 CPNE6O95741 557 aa18.29■□□□□ 0.52
CACNA1A-257ENST00000638009 RNLSQ5VYX0 342 aa18.29■□□□□ 0.52
CACNA1A-257ENST00000638009 ARHGAP23Q9P227 1491 aa18.29■□□□□ 0.52
CACNA1A-257ENST00000638009 TRAPPC2LH3BP13 241 aa18.29■□□□□ 0.52
CACNA1A-257ENST00000638009 ITGB2P05107 769 aa18.29■□□□□ 0.52
CACNA1A-257ENST00000638009 THBS1P07996 1170 aa18.29■□□□□ 0.52
CACNA1A-257ENST00000638009 FOLR1P15328 257 aa18.29■□□□□ 0.52
CACNA1A-257ENST00000638009 PCBP2Q15366 365 aaKnown RBP eCLIP18.29■□□□□ 0.52
CACNA1A-257ENST00000638009 OR52H1Q8NGJ2 320 aa18.29■□□□□ 0.52
CACNA1A-257ENST00000638009 TMEM59Q9BXS4 323 aa18.29■□□□□ 0.52
CACNA1A-257ENST00000638009 CA5AP35218 305 aa18.29■□□□□ 0.52
CACNA1A-257ENST00000638009 STC1P52823 247 aa18.29■□□□□ 0.52
CACNA1A-257ENST00000638009 ZNF836Q6ZNA1 936 aa18.29■□□□□ 0.52
CACNA1A-257ENST00000638009 SLAIN1Q8ND83 568 aa18.29■□□□□ 0.52
CACNA1A-257ENST00000638009 ADAMTS14Q8WXS8 1223 aa18.29■□□□□ 0.52
CACNA1A-257ENST00000638009 CLSTN3Q9BQT9 956 aa18.29■□□□□ 0.52
CACNA1A-257ENST00000638009 NDRG2Q9UN36 371 aaKnown RBP18.29■□□□□ 0.52
CACNA1A-257ENST00000638009 SLC38A8A6NNN8 435 aa18.29■□□□□ 0.52
CACNA1A-257ENST00000638009 FOXE1O00358 373 aaPredicted RBP18.29■□□□□ 0.52
CACNA1A-257ENST00000638009 HLA-DQB2P05538 268 aa18.29■□□□□ 0.52
CACNA1A-257ENST00000638009 DHRS4L1P0CG22 281 aa18.29■□□□□ 0.52
CACNA1A-257ENST00000638009 CKMT1AP12532 417 aa18.29■□□□□ 0.52
CACNA1A-257ENST00000638009 LCN6P62502 163 aa18.29■□□□□ 0.52
CACNA1A-257ENST00000638009 FAM122BQ7Z309 247 aa18.29■□□□□ 0.52
CACNA1A-257ENST00000638009 TMEM151BQ8IW70 566 aa18.29■□□□□ 0.52
CACNA1A-257ENST00000638009 NAT8LQ8N9F0 302 aa18.29■□□□□ 0.52
CACNA1A-257ENST00000638009 P2RX7Q99572 595 aaKnown RBP18.29■□□□□ 0.52
CACNA1A-257ENST00000638009 ZBTB20Q9HC78 741 aaPredicted RBP18.29■□□□□ 0.52
CACNA1A-257ENST00000638009 RAB18Q9NP72 206 aa18.29■□□□□ 0.52
CACNA1A-257ENST00000638009 SLC35A3Q9Y2D2 325 aa18.29■□□□□ 0.52
CACNA1A-257ENST00000638009 TSPAN6O43657 245 aa18.28■□□□□ 0.52
CACNA1A-257ENST00000638009 PTBP3O95758 552 aaKnown RBP18.28■□□□□ 0.52
CACNA1A-257ENST00000638009 SERTAD2Q14140 314 aa18.28■□□□□ 0.52
CACNA1A-257ENST00000638009 FAM213BQ8TBF2 198 aa18.28■□□□□ 0.52
CACNA1A-257ENST00000638009 TPPP3Q9BW30 176 aa18.28■□□□□ 0.52
CACNA1A-257ENST00000638009 TGIF2Q9GZN2 237 aa18.28■□□□□ 0.52
CACNA1A-257ENST00000638009 MTHFD2LQ9H903 347 aaPredicted RBP18.28■□□□□ 0.52
CACNA1A-257ENST00000638009 DEPDC5O75140 1603 aa18.28■□□□□ 0.52
CACNA1A-257ENST00000638009 RAB40BQ12829 278 aa18.28■□□□□ 0.52
CACNA1A-257ENST00000638009 PLXDC1Q8IUK5 500 aa18.28■□□□□ 0.52
CACNA1A-257ENST00000638009 PIGVQ9NUD9 493 aa18.28■□□□□ 0.52
CACNA1A-257ENST00000638009 SMOXQ9NWM0 555 aa18.28■□□□□ 0.52
CACNA1A-257ENST00000638009 EHFQ9NZC4 300 aa18.28■□□□□ 0.52
CACNA1A-257ENST00000638009 PTPRMP28827 1452 aa18.28■□□□□ 0.52
CACNA1A-257ENST00000638009 HPNP05981 417 aa18.28■□□□□ 0.52
CACNA1A-257ENST00000638009 HNRNPA3P51991 378 aaKnown RBP18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms