RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 PAFAH1B3Q15102 231 aaKnown RBP5.24□□□□□ -1.57
SCN1A-209ENST00000635750 IL17AQ16552 155 aa5.24□□□□□ -1.57
SCN1A-209ENST00000635750 DUSP7Q16829 419 aa5.24□□□□□ -1.57
SCN1A-209ENST00000635750 SLC39A5Q6ZMH5 540 aa5.24□□□□□ -1.57
SCN1A-209ENST00000635750 SLC16A14Q7RTX9 510 aa5.24□□□□□ -1.57
SCN1A-209ENST00000635750 ZNF417Q8TAU3 575 aa5.24□□□□□ -1.57
SCN1A-209ENST00000635750 APH1AQ96BI3 265 aa5.24□□□□□ -1.57
SCN1A-209ENST00000635750 PRRC1Q96M27 445 aa5.24□□□□□ -1.57
SCN1A-209ENST00000635750 FAM234AQ9H0X4 552 aa5.24□□□□□ -1.57
SCN1A-209ENST00000635750 ARMC1Q9NVT9 282 aa5.24□□□□□ -1.57
SCN1A-209ENST00000635750 ANKMY1Q9P2S6 941 aa5.24□□□□□ -1.57
SCN1A-209ENST00000635750 NOTOA8MTQ0 251 aa5.24□□□□□ -1.57
SCN1A-209ENST00000635750 BEST1O76090 585 aa5.24□□□□□ -1.57
SCN1A-209ENST00000635750 NDUFB2O95178 105 aa5.24□□□□□ -1.57
SCN1A-209ENST00000635750 PPP1R3DO95685 299 aa5.24□□□□□ -1.57
SCN1A-209ENST00000635750 TPT1P13693 172 aaKnown RBP5.24□□□□□ -1.57
SCN1A-209ENST00000635750 IL1RNP18510 177 aa5.24□□□□□ -1.57
SCN1A-209ENST00000635750 MTNR1AP48039 350 aa5.24□□□□□ -1.57
SCN1A-209ENST00000635750 AADACL3Q5VUY0 350 aa5.24□□□□□ -1.57
SCN1A-209ENST00000635750 ZFAND4Q86XD8 727 aa5.24□□□□□ -1.57
SCN1A-209ENST00000635750 CHCHD4Q8N4Q1 142 aa5.24□□□□□ -1.57
SCN1A-209ENST00000635750 GPR148Q8TDV2 347 aa5.24□□□□□ -1.57
SCN1A-209ENST00000635750 DDX1Q92499 740 aaKnown RBP5.24□□□□□ -1.57
SCN1A-209ENST00000635750 F2RL3Q96RI0 385 aa5.24□□□□□ -1.57
SCN1A-209ENST00000635750 CCDC106Q9BWC9 280 aa5.24□□□□□ -1.57
SCN1A-209ENST00000635750 ULBP2Q9BZM5 246 aa5.24□□□□□ -1.57
SCN1A-209ENST00000635750 SLC6A17Q9H1V8 727 aa5.24□□□□□ -1.57
SCN1A-209ENST00000635750 KCNK12Q9HB15 430 aa5.24□□□□□ -1.57
SCN1A-209ENST00000635750 ASF1BQ9NVP2 202 aa5.24□□□□□ -1.57
SCN1A-209ENST00000635750 GOLT1BQ9Y3E0 138 aa5.24□□□□□ -1.57
SCN1A-209ENST00000635750 DPM1O60762 260 aa5.24□□□□□ -1.57
SCN1A-209ENST00000635750 FGF4P08620 206 aa5.24□□□□□ -1.57
SCN1A-209ENST00000635750 AKAIN1P0CW23 69 aa5.24□□□□□ -1.57
SCN1A-209ENST00000635750 RPL7P18124 248 aaKnown RBP5.24□□□□□ -1.57
SCN1A-209ENST00000635750 SERPINA2P20848 420 aa5.24□□□□□ -1.57
SCN1A-209ENST00000635750 XCR1P46094 333 aa5.24□□□□□ -1.57
SCN1A-209ENST00000635750 HTR5AP47898 357 aa5.24□□□□□ -1.57
SCN1A-209ENST00000635750 SLC35A2P78381 396 aa5.24□□□□□ -1.57
SCN1A-209ENST00000635750 SPOCK1Q08629 439 aa5.24□□□□□ -1.57
SCN1A-209ENST00000635750 GK2Q14410 553 aaPredicted RBP5.24□□□□□ -1.57
SCN1A-209ENST00000635750 KIR2DS3Q14952 304 aa5.24□□□□□ -1.57
SCN1A-209ENST00000635750 CDKN3Q16667 212 aa5.24□□□□□ -1.57
SCN1A-209ENST00000635750 COQ5Q5HYK3 327 aa5.24□□□□□ -1.57
SCN1A-209ENST00000635750 FAM122CQ6P4D5 195 aa5.24□□□□□ -1.57
SCN1A-209ENST00000635750 GDPD3Q7L5L3 318 aa5.24□□□□□ -1.57
SCN1A-209ENST00000635750 ABHD11Q8NFV4 315 aa5.24□□□□□ -1.57
SCN1A-209ENST00000635750 HUS1BQ8NHY5 278 aa5.24□□□□□ -1.57
SCN1A-209ENST00000635750 ZNF296Q8WUU4 475 aaPredicted RBP5.24□□□□□ -1.57
SCN1A-209ENST00000635750 CHFRQ96EP1 664 aa5.24□□□□□ -1.57
SCN1A-209ENST00000635750 INTS14Q96SY0 518 aa5.24□□□□□ -1.57
SCN1A-209ENST00000635750 SLC22A7Q9Y694 548 aa5.24□□□□□ -1.57
SCN1A-209ENST00000635750 PRAMEF27A3QJZ7 478 aa5.23□□□□□ -1.57
SCN1A-209ENST00000635750 ANHXE9PGG2 379 aa5.23□□□□□ -1.57
SCN1A-209ENST00000635750 SCAMP2O15127 329 aaKnown RBP5.23□□□□□ -1.57
SCN1A-209ENST00000635750 TOXO94900 526 aa5.23□□□□□ -1.57
SCN1A-209ENST00000635750 AHSGP02765 367 aa5.23□□□□□ -1.57
SCN1A-209ENST00000635750 CSF1P09603 554 aa5.23□□□□□ -1.57
SCN1A-209ENST00000635750 HNRNPH3P31942 346 aaKnown RBP5.23□□□□□ -1.57
SCN1A-209ENST00000635750 MAP2K4P45985 399 aa5.23□□□□□ -1.57
SCN1A-209ENST00000635750 GNB1P62873 340 aa5.23□□□□□ -1.57
SCN1A-209ENST00000635750 CNPY1Q3B7I2 92 aa5.23□□□□□ -1.57
SCN1A-209ENST00000635750 ZMAT1Q5H9K5 638 aa5.23□□□□□ -1.57
SCN1A-209ENST00000635750 ZNF678Q5SXM1 525 aa5.23□□□□□ -1.57
SCN1A-209ENST00000635750 NDUFAF5Q5TEU4 345 aa5.23□□□□□ -1.57
SCN1A-209ENST00000635750 TMEM244Q5VVB8 128 aa5.23□□□□□ -1.57
SCN1A-209ENST00000635750 PRAMEF9Q5VWM5 478 aa5.23□□□□□ -1.57
SCN1A-209ENST00000635750 NANOGP8Q6NSW7 305 aa5.23□□□□□ -1.57
SCN1A-209ENST00000635750 PLBD1Q6P4A8 553 aa5.23□□□□□ -1.57
SCN1A-209ENST00000635750 TRMT10BQ6PF06 316 aaKnown RBP5.23□□□□□ -1.57
SCN1A-209ENST00000635750 KLHDC10Q6PID8 442 aa5.23□□□□□ -1.57
SCN1A-209ENST00000635750 DBX2Q6ZNG2 339 aa5.23□□□□□ -1.57
SCN1A-209ENST00000635750 OVCH1Q7RTY7 1134 aa5.23□□□□□ -1.57
SCN1A-209ENST00000635750 CCDC28AQ8IWP9 274 aa5.23□□□□□ -1.57
SCN1A-209ENST00000635750 C12orf76Q8N812 135 aaPredicted RBP5.23□□□□□ -1.57
SCN1A-209ENST00000635750 ZNRF4Q8WWF5 429 aa5.23□□□□□ -1.57
SCN1A-209ENST00000635750 ACOT13Q9NPJ3 140 aa5.23□□□□□ -1.57
SCN1A-209ENST00000635750 XPNPEP1Q9NQW7 623 aa5.23□□□□□ -1.57
SCN1A-209ENST00000635750 MRPL15Q9P015 296 aaKnown RBP5.23□□□□□ -1.57
SCN1A-209ENST00000635750 H0Y8G0 127 aa5.23□□□□□ -1.57
SCN1A-209ENST00000635750 SGCEO43556 437 aa5.23□□□□□ -1.57
SCN1A-209ENST00000635750 CDK1P06493 297 aa5.23□□□□□ -1.57
SCN1A-209ENST00000635750 CDK4P11802 303 aa5.23□□□□□ -1.57
SCN1A-209ENST00000635750 HADHBP55084 474 aaKnown RBP5.23□□□□□ -1.57
SCN1A-209ENST00000635750 RPS23P62266 143 aaKnown RBP5.23□□□□□ -1.57
SCN1A-209ENST00000635750 SLC14A1Q13336 389 aa5.23□□□□□ -1.57
SCN1A-209ENST00000635750 HNF4GQ14541 408 aa5.23□□□□□ -1.57
SCN1A-209ENST00000635750 QPCTQ16769 361 aa5.23□□□□□ -1.57
SCN1A-209ENST00000635750 VWA5B2Q8N398 1253 aa5.23□□□□□ -1.57
SCN1A-209ENST00000635750 FAM160A2Q8N612 972 aaPredicted RBP5.23□□□□□ -1.57
SCN1A-209ENST00000635750 OR1E3Q8WZA6 343 aa5.23□□□□□ -1.57
SCN1A-209ENST00000635750 UHRF1Q96T88 793 aaPredicted RBP5.23□□□□□ -1.57
SCN1A-209ENST00000635750 BOCQ9BWV1 1114 aa5.23□□□□□ -1.57
SCN1A-209ENST00000635750 PELI2Q9HAT8 420 aa5.23□□□□□ -1.57
SCN1A-209ENST00000635750 TRAV18A0A075B6X5 111 aa5.23□□□□□ -1.57
SCN1A-209ENST00000635750 F5H5P2 479 aa5.23□□□□□ -1.57
SCN1A-209ENST00000635750 SPINT2O43291 252 aa5.23□□□□□ -1.57
SCN1A-209ENST00000635750 LGI1O95970 557 aa5.23□□□□□ -1.57
SCN1A-209ENST00000635750 RAB6AP20340 208 aa5.23□□□□□ -1.57
SCN1A-209ENST00000635750 CD38P28907 300 aa5.23□□□□□ -1.57
SCN1A-209ENST00000635750 MMP12P39900 470 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms