RNA–Protein interactions for RNA: ENST00000633552.1

GPCPD1-207, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

TSL 5

Gene GPCPD1, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-207ENST00000633552 EFNA3P52797 238 aa3.19□□□□□ -1.9
GPCPD1-207ENST00000633552 PLA2G16P53816 162 aa3.19□□□□□ -1.9
GPCPD1-207ENST00000633552 DPYSL3Q14195 570 aa3.19□□□□□ -1.9
GPCPD1-207ENST00000633552 DNAJC21Q5F1R6 531 aaKnown RBP3.19□□□□□ -1.9
GPCPD1-207ENST00000633552 C9orf129Q5T035 196 aaKnown RBP3.19□□□□□ -1.9
GPCPD1-207ENST00000633552 LIPNQ5VXI9 398 aa3.19□□□□□ -1.9
GPCPD1-207ENST00000633552 ZNF544Q6NX49 715 aa3.19□□□□□ -1.9
GPCPD1-207ENST00000633552 FAHD2BQ6P2I3 314 aaPredicted RBP3.19□□□□□ -1.9
GPCPD1-207ENST00000633552 CXCL17Q6UXB2 119 aa3.19□□□□□ -1.9
GPCPD1-207ENST00000633552 DNM1P46Q6ZS02 220 aa3.19□□□□□ -1.9
GPCPD1-207ENST00000633552 SH2D6Q7Z4S9 175 aa3.19□□□□□ -1.9
GPCPD1-207ENST00000633552 ZNF589Q86UQ0 364 aaPredicted RBP3.19□□□□□ -1.9
GPCPD1-207ENST00000633552 OR5L2Q8NGL0 311 aa3.19□□□□□ -1.9
GPCPD1-207ENST00000633552 OR2A12Q8NGT7 310 aa3.19□□□□□ -1.9
GPCPD1-207ENST00000633552 RAET1EQ8TD07 263 aa3.19□□□□□ -1.9
GPCPD1-207ENST00000633552 HAVCR1Q96D42 359 aa3.19□□□□□ -1.9
GPCPD1-207ENST00000633552 FAM122AQ96E09 287 aa3.19□□□□□ -1.9
GPCPD1-207ENST00000633552 FAHD2AQ96GK7 314 aa3.19□□□□□ -1.9
GPCPD1-207ENST00000633552 C16orf74Q96GX8 76 aa3.19□□□□□ -1.9
GPCPD1-207ENST00000633552 IL4I1Q96RQ9 567 aa3.19□□□□□ -1.9
GPCPD1-207ENST00000633552 SPATA16Q9BXB7 569 aa3.19□□□□□ -1.9
GPCPD1-207ENST00000633552 EHD1Q9H4M9 534 aa3.19□□□□□ -1.9
GPCPD1-207ENST00000633552 RIMS3Q9UJD0 308 aa3.19□□□□□ -1.9
GPCPD1-207ENST00000633552 GSTK1Q9Y2Q3 226 aa3.19□□□□□ -1.9
GPCPD1-207ENST00000633552 WDR45Q9Y484 360 aa3.19□□□□□ -1.9
GPCPD1-207ENST00000633552 USP16Q9Y5T5 823 aa3.19□□□□□ -1.9
GPCPD1-207ENST00000633552 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.18□□□□□ -1.9
GPCPD1-207ENST00000633552 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.18□□□□□ -1.9
GPCPD1-207ENST00000633552 ESYT2A0FGR8 921 aa3.18□□□□□ -1.9
GPCPD1-207ENST00000633552 KRTAP9-6A8MVA2 160 aa3.18□□□□□ -1.9
GPCPD1-207ENST00000633552 G3V4G9 280 aa3.18□□□□□ -1.9
GPCPD1-207ENST00000633552 ZSCAN12O43309 604 aa3.18□□□□□ -1.9
GPCPD1-207ENST00000633552 OR1F1O43749 312 aa3.18□□□□□ -1.9
GPCPD1-207ENST00000633552 N4BP1O75113 896 aaKnown RBP3.18□□□□□ -1.9
GPCPD1-207ENST00000633552 LYPLA1O75608 230 aaPredicted RBP3.18□□□□□ -1.9
GPCPD1-207ENST00000633552 NEBLO76041 1014 aa3.18□□□□□ -1.9
GPCPD1-207ENST00000633552 B3GAT3O94766 335 aa3.18□□□□□ -1.9
GPCPD1-207ENST00000633552 ACTL6AO96019 429 aa3.18□□□□□ -1.9
GPCPD1-207ENST00000633552 ALOX5P09917 674 aa3.18□□□□□ -1.9
GPCPD1-207ENST00000633552 HSPA5P11021 654 aaKnown RBP3.18□□□□□ -1.9
GPCPD1-207ENST00000633552 RPA2P15927 270 aa3.18□□□□□ -1.9
GPCPD1-207ENST00000633552 ZNF19P17023 458 aa3.18□□□□□ -1.9
GPCPD1-207ENST00000633552 PSMA5P28066 241 aa3.18□□□□□ -1.9
GPCPD1-207ENST00000633552 STARP49675 285 aa3.18□□□□□ -1.9
GPCPD1-207ENST00000633552 CNTN2Q02246 1040 aa3.18□□□□□ -1.9
GPCPD1-207ENST00000633552 RIPPLY1Q0D2K3 151 aa3.18□□□□□ -1.9
GPCPD1-207ENST00000633552 ELP6Q0PNE2 266 aa3.18□□□□□ -1.9
GPCPD1-207ENST00000633552 RAB40BQ12829 278 aa3.18□□□□□ -1.9
GPCPD1-207ENST00000633552 SNTB2Q13425 540 aaKnown RBP3.18□□□□□ -1.9
GPCPD1-207ENST00000633552 PRR4Q16378 134 aa3.18□□□□□ -1.9
GPCPD1-207ENST00000633552 AANATQ16613 207 aa3.18□□□□□ -1.9
GPCPD1-207ENST00000633552 TATDN3Q17R31 274 aa3.18□□□□□ -1.9
GPCPD1-207ENST00000633552 SLC5A12Q1EHB4 618 aa3.18□□□□□ -1.9
GPCPD1-207ENST00000633552 RABGAP1LQ5R372 815 aa3.18□□□□□ -1.9
GPCPD1-207ENST00000633552 ATF7IP2Q5U623 682 aa3.18□□□□□ -1.9
GPCPD1-207ENST00000633552 ATL3Q6DD88 541 aa3.18□□□□□ -1.9
GPCPD1-207ENST00000633552 ARCQ7LC44 396 aa3.18□□□□□ -1.9
GPCPD1-207ENST00000633552 SKA3Q8IX90 412 aa3.18□□□□□ -1.9
GPCPD1-207ENST00000633552 ALLCQ8N6M5 410 aa3.18□□□□□ -1.9
GPCPD1-207ENST00000633552 ATP6V0D2Q8N8Y2 350 aa3.18□□□□□ -1.9
GPCPD1-207ENST00000633552 OR9A1PQ8NGU1 263 aa3.18□□□□□ -1.9
GPCPD1-207ENST00000633552 ZNF564Q8TBZ8 553 aaPredicted RBP3.18□□□□□ -1.9
GPCPD1-207ENST00000633552 SPRYD4Q8WW59 207 aaPredicted RBP3.18□□□□□ -1.9
GPCPD1-207ENST00000633552 C12orf66Q96MD2 445 aa3.18□□□□□ -1.9
GPCPD1-207ENST00000633552 TTC25Q96NG3 672 aa3.18□□□□□ -1.9
GPCPD1-207ENST00000633552 SMIM14Q96QK8 99 aa3.18□□□□□ -1.9
GPCPD1-207ENST00000633552 SLC6A7Q99884 636 aa3.18□□□□□ -1.9
GPCPD1-207ENST00000633552 NICN1Q9BSH3 213 aa3.18□□□□□ -1.9
GPCPD1-207ENST00000633552 CHIAQ9BZP6 476 aa3.18□□□□□ -1.9
GPCPD1-207ENST00000633552 TMEM117Q9H0C3 514 aa3.18□□□□□ -1.9
GPCPD1-207ENST00000633552 PDFQ9HBH1 243 aa3.18□□□□□ -1.9
GPCPD1-207ENST00000633552 AATFQ9NY61 560 aaKnown RBP eCLIP3.18□□□□□ -1.9
GPCPD1-207ENST00000633552 CGNQ9P2M7 1197 aaKnown RBP3.18□□□□□ -1.9
GPCPD1-207ENST00000633552 UBQLN1Q9UMX0 589 aaKnown RBP3.18□□□□□ -1.9
GPCPD1-207ENST00000633552 CELA1Q9UNI1 258 aa3.18□□□□□ -1.9
GPCPD1-207ENST00000633552 CA5BQ9Y2D0 317 aa3.18□□□□□ -1.9
GPCPD1-207ENST00000633552 LOC100131303A0A0U1RQF7 123 aa3.17□□□□□ -1.9
GPCPD1-207ENST00000633552 TUBAL3A6NHL2 446 aa3.17□□□□□ -1.9
GPCPD1-207ENST00000633552 MSH4O15457 936 aa3.17□□□□□ -1.9
GPCPD1-207ENST00000633552 BCAS1O75363 584 aaPredicted RBP3.17□□□□□ -1.9
GPCPD1-207ENST00000633552 IGHV3-23P01764 117 aa3.17□□□□□ -1.9
GPCPD1-207ENST00000633552 DNAH10OSP0CZ25 163 aa3.17□□□□□ -1.9
GPCPD1-207ENST00000633552 PGCP20142 388 aa3.17□□□□□ -1.9
GPCPD1-207ENST00000633552 TBXA2RP21731 343 aa3.17□□□□□ -1.9
GPCPD1-207ENST00000633552 DRD5P21918 477 aa3.17□□□□□ -1.9
GPCPD1-207ENST00000633552 HNRNPA2B1P22626 353 aaKnown RBP3.17□□□□□ -1.9
GPCPD1-207ENST00000633552 ANXA13P27216 316 aa3.17□□□□□ -1.9
GPCPD1-207ENST00000633552 CA8P35219 290 aa3.17□□□□□ -1.9
GPCPD1-207ENST00000633552 RDXP35241 583 aaKnown RBP3.17□□□□□ -1.9
GPCPD1-207ENST00000633552 SOX6P35712 828 aa3.17□□□□□ -1.9
GPCPD1-207ENST00000633552 RBMXP38159 391 aaKnown RBP3.17□□□□□ -1.9
GPCPD1-207ENST00000633552 AP3M2P53677 418 aa3.17□□□□□ -1.9
GPCPD1-207ENST00000633552 PDK4Q16654 411 aa3.17□□□□□ -1.9
GPCPD1-207ENST00000633552 NADK2Q4G0N4 442 aa3.17□□□□□ -1.9
GPCPD1-207ENST00000633552 TPRA1Q86W33 373 aa3.17□□□□□ -1.9
GPCPD1-207ENST00000633552 TGIF2LYQ8IUE0 185 aa3.17□□□□□ -1.9
GPCPD1-207ENST00000633552 ZDHHC21Q8IVQ6 265 aa3.17□□□□□ -1.9
GPCPD1-207ENST00000633552 LRRC43Q8N309 656 aa3.17□□□□□ -1.9
GPCPD1-207ENST00000633552 DHRSXQ8N5I4 330 aa3.17□□□□□ -1.9
GPCPD1-207ENST00000633552 C15orf54Q8N8G6 183 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms