RNA–Protein interactions for RNA: ENST00000626236.2

SGMS1-211, Transcript of sphingomyelin synthase 1, humanhuman

TSL 1 (best)

Gene SGMS1, Length 1,013 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-211ENST00000626236 SKP2Q13309 424 aa7.76□□□□□ -1.17
SGMS1-211ENST00000626236 ELOAQ14241 798 aaKnown RBP7.76□□□□□ -1.17
SGMS1-211ENST00000626236 TOMM20Q15388 145 aa7.76□□□□□ -1.17
SGMS1-211ENST00000626236 ZSWIM7Q19AV6 140 aa7.76□□□□□ -1.17
SGMS1-211ENST00000626236 PLEKHN1Q494U1 663 aaPredicted RBP7.76□□□□□ -1.17
SGMS1-211ENST00000626236 MTX3Q5HYI7 312 aa7.76□□□□□ -1.17
SGMS1-211ENST00000626236 COLEC12Q5KU26 742 aa7.76□□□□□ -1.17
SGMS1-211ENST00000626236 SLC6A19Q695T7 634 aa7.76□□□□□ -1.17
SGMS1-211ENST00000626236 CBLN3Q6UW01 205 aa7.76□□□□□ -1.17
SGMS1-211ENST00000626236 ENPP6Q6UWR7 440 aa7.76□□□□□ -1.17
SGMS1-211ENST00000626236 FKBP9P1Q75LS8 142 aa7.76□□□□□ -1.17
SGMS1-211ENST00000626236 COMTD1Q86VU5 262 aa7.76□□□□□ -1.17
SGMS1-211ENST00000626236 SPATA24Q86W54 205 aa7.76□□□□□ -1.17
SGMS1-211ENST00000626236 PLCZ1Q86YW0 608 aa7.76□□□□□ -1.17
SGMS1-211ENST00000626236 EID3Q8N140 333 aa7.76□□□□□ -1.17
SGMS1-211ENST00000626236 FAM86B1Q8N7N1 296 aa7.76□□□□□ -1.17
SGMS1-211ENST00000626236 WDSUB1Q8N9V3 476 aa7.76□□□□□ -1.17
SGMS1-211ENST00000626236 FAM71CQ8NEG0 241 aa7.76□□□□□ -1.17
SGMS1-211ENST00000626236 TOR1AIP2Q8NFQ8 470 aa7.76□□□□□ -1.17
SGMS1-211ENST00000626236 OR4K17Q8NGC6 315 aa7.76□□□□□ -1.17
SGMS1-211ENST00000626236 OR52E4Q8NGH9 312 aa7.76□□□□□ -1.17
SGMS1-211ENST00000626236 VANGL1Q8TAA9 524 aaPredicted RBP7.76□□□□□ -1.17
SGMS1-211ENST00000626236 CNOT9Q92600 299 aaKnown RBP7.76□□□□□ -1.17
SGMS1-211ENST00000626236 PROX1Q92786 737 aa7.76□□□□□ -1.17
SGMS1-211ENST00000626236 FRMD6Q96NE9 622 aa7.76□□□□□ -1.17
SGMS1-211ENST00000626236 TTTY12Q9BZ98 90 aa7.76□□□□□ -1.17
SGMS1-211ENST00000626236 LAT2Q9GZY6 243 aa7.76□□□□□ -1.17
SGMS1-211ENST00000626236 SLC25A18Q9H1K4 315 aa7.76□□□□□ -1.17
SGMS1-211ENST00000626236 DSN1Q9H410 356 aa7.76□□□□□ -1.17
SGMS1-211ENST00000626236 HHATLQ9HCP6 504 aa7.76□□□□□ -1.17
SGMS1-211ENST00000626236 ZFP64Q9NPA5 681 aa7.76□□□□□ -1.17
SGMS1-211ENST00000626236 OLAHQ9NV23 265 aa7.76□□□□□ -1.17
SGMS1-211ENST00000626236 DNAJB12Q9NXW2 375 aaKnown RBP7.76□□□□□ -1.17
SGMS1-211ENST00000626236 FBXL2Q9UKC9 423 aa7.76□□□□□ -1.17
SGMS1-211ENST00000626236 BAG5Q9UL15 447 aa7.76□□□□□ -1.17
SGMS1-211ENST00000626236 BOKQ9UMX3 212 aaPredicted RBP7.76□□□□□ -1.17
SGMS1-211ENST00000626236 SH3GLB1Q9Y371 365 aa7.76□□□□□ -1.17
SGMS1-211ENST00000626236 PCDHGB6Q9Y5F9 930 aa7.76□□□□□ -1.17
SGMS1-211ENST00000626236 PCNX3Q9H6A9 2034 aa7.76□□□□□ -1.17
SGMS1-211ENST00000626236 HEATR5AQ86XA9 2040 aa7.75□□□□□ -1.17
SGMS1-211ENST00000626236 IGLV3-32A0A0A0MS00 114 aa7.75□□□□□ -1.17
SGMS1-211ENST00000626236 TCRBV5S2A0A599 114 aa7.75□□□□□ -1.17
SGMS1-211ENST00000626236 ANKUB1A6NFN9 424 aa7.75□□□□□ -1.17
SGMS1-211ENST00000626236 LRRC3CA6NJW4 275 aa7.75□□□□□ -1.17
SGMS1-211ENST00000626236 FAM166BA8MTA8 275 aa7.75□□□□□ -1.17
SGMS1-211ENST00000626236 TMEM229AB2RXF0 380 aa7.75□□□□□ -1.17
SGMS1-211ENST00000626236 B4DXG7 233 aa7.75□□□□□ -1.17
SGMS1-211ENST00000626236 SYT5O00445 386 aa7.75□□□□□ -1.17
SGMS1-211ENST00000626236 AP3D1O14617 1153 aa7.75□□□□□ -1.17
SGMS1-211ENST00000626236 CDC40O60508 579 aaKnown RBP eCLIP7.75□□□□□ -1.17
SGMS1-211ENST00000626236 RASAL1O95294 804 aa7.75□□□□□ -1.17
SGMS1-211ENST00000626236 LGI1O95970 557 aa7.75□□□□□ -1.17
SGMS1-211ENST00000626236 C8BP07358 591 aa7.75□□□□□ -1.17
SGMS1-211ENST00000626236 GKN3PP0CG01 181 aa7.75□□□□□ -1.17
SGMS1-211ENST00000626236 ELAVL4P26378 380 aaKnown RBP7.75□□□□□ -1.17
SGMS1-211ENST00000626236 GDF1P27539 372 aa7.75□□□□□ -1.17
SGMS1-211ENST00000626236 MSX1P28360 303 aa7.75□□□□□ -1.17
SGMS1-211ENST00000626236 RYKP34925 604 aa7.75□□□□□ -1.17
SGMS1-211ENST00000626236 OR1E2P47887 323 aa7.75□□□□□ -1.17
SGMS1-211ENST00000626236 P2RX1P51575 399 aa7.75□□□□□ -1.17
SGMS1-211ENST00000626236 RGS8P57771 180 aaPredicted RBP7.75□□□□□ -1.17
SGMS1-211ENST00000626236 HOXC5Q00444 222 aa7.75□□□□□ -1.17
SGMS1-211ENST00000626236 FOXO1Q12778 655 aa7.75□□□□□ -1.17
SGMS1-211ENST00000626236 CBFBQ13951 182 aa7.75□□□□□ -1.17
SGMS1-211ENST00000626236 NRF1Q16656 503 aa7.75□□□□□ -1.17
SGMS1-211ENST00000626236 IFI44LQ53G44 452 aa7.75□□□□□ -1.17
SGMS1-211ENST00000626236 TIGD3Q6B0B8 471 aa7.75□□□□□ -1.17
SGMS1-211ENST00000626236 PCSK4Q6UW60 755 aa7.75□□□□□ -1.17
SGMS1-211ENST00000626236 ZNF550Q7Z398 422 aa7.75□□□□□ -1.17
SGMS1-211ENST00000626236 CARM1Q86X55 608 aa7.75□□□□□ -1.17
SGMS1-211ENST00000626236 GRAMD2AQ8IUY3 354 aa7.75□□□□□ -1.17
SGMS1-211ENST00000626236 LACC1Q8IV20 430 aa7.75□□□□□ -1.17
SGMS1-211ENST00000626236 ZNF440Q8IYI8 595 aa7.75□□□□□ -1.17
SGMS1-211ENST00000626236 FADS6Q8N9I5 356 aa7.75□□□□□ -1.17
SGMS1-211ENST00000626236 TEX19Q8NA77 164 aa7.75□□□□□ -1.17
SGMS1-211ENST00000626236 ZFP62Q8NB50 900 aaPredicted RBP7.75□□□□□ -1.17
SGMS1-211ENST00000626236 OR2M3Q8NG83 312 aa7.75□□□□□ -1.17
SGMS1-211ENST00000626236 OR5W2Q8NH69 310 aa7.75□□□□□ -1.17
SGMS1-211ENST00000626236 GEMIN6Q8WXD5 167 aaKnown RBP7.75□□□□□ -1.17
SGMS1-211ENST00000626236 PNPLA2Q96AD5 504 aa7.75□□□□□ -1.17
SGMS1-211ENST00000626236 NTNG2Q96CW9 530 aa7.75□□□□□ -1.17
SGMS1-211ENST00000626236 SLC47A1Q96FL8 570 aa7.75□□□□□ -1.17
SGMS1-211ENST00000626236 PYURFQ96I23 114 aa7.75□□□□□ -1.17
SGMS1-211ENST00000626236 RSRC1Q96IZ7 334 aaKnown RBP7.75□□□□□ -1.17
SGMS1-211ENST00000626236 GNRHR2Q96P88 292 aa7.75□□□□□ -1.17
SGMS1-211ENST00000626236 SEPHS2Q99611 448 aa7.75□□□□□ -1.17
SGMS1-211ENST00000626236 ARHGDIGQ99819 225 aa7.75□□□□□ -1.17
SGMS1-211ENST00000626236 KLHDC3Q9BQ90 382 aa7.75□□□□□ -1.17
SGMS1-211ENST00000626236 WFDC6Q9BQY6 131 aa7.75□□□□□ -1.17
SGMS1-211ENST00000626236 PTGES2Q9H7Z7 377 aa7.75□□□□□ -1.17
SGMS1-211ENST00000626236 EXOSC3Q9NQT5 275 aaKnown RBP7.75□□□□□ -1.17
SGMS1-211ENST00000626236 B4GALT7Q9UBV7 327 aa7.75□□□□□ -1.17
SGMS1-211ENST00000626236 DKKL1Q9UK85 242 aa7.75□□□□□ -1.17
SGMS1-211ENST00000626236 ICAM5Q9UMF0 924 aa7.75□□□□□ -1.17
SGMS1-211ENST00000626236 SLC9A8Q9Y2E8 581 aa7.75□□□□□ -1.17
SGMS1-211ENST00000626236 C15orf41Q9Y2V0 281 aa7.75□□□□□ -1.17
SGMS1-211ENST00000626236 PIEZO2Q9H5I5 2752 aa7.74□□□□□ -1.17
SGMS1-211ENST00000626236 AQP12BA6NM10 295 aa7.74□□□□□ -1.17
SGMS1-211ENST00000626236 FAM47E-STBD1D6RA91 191 aa7.74□□□□□ -1.17
SGMS1-211ENST00000626236 ACOT7O00154 380 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms