RNA–Protein interactions for RNA: ENST00000626028.1

SF1-220, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-220ENST00000626028 INTS9Q9NV88 658 aaKnown RBP20.11■□□□□ 0.81
SF1-220ENST00000626028 TMEM45AQ9NWC5 275 aa20.11■□□□□ 0.81
SF1-220ENST00000626028 SLC35A3Q9Y2D2 325 aa20.11■□□□□ 0.81
SF1-220ENST00000626028 CARD8Q9Y2G2 431 aa20.11■□□□□ 0.81
SF1-220ENST00000626028 WDR45Q9Y484 360 aa20.11■□□□□ 0.81
SF1-220ENST00000626028 TNFSF12-TNFSF13A0A0A6YY99 330 aa20.1■□□□□ 0.81
SF1-220ENST00000626028 A0A1W2PNV4 684 aa20.1■□□□□ 0.81
SF1-220ENST00000626028 MSTNO14793 375 aa20.1■□□□□ 0.81
SF1-220ENST00000626028 POLR3GO15318 223 aaPredicted RBP20.1■□□□□ 0.81
SF1-220ENST00000626028 UGT2B17O75795 530 aa20.1■□□□□ 0.81
SF1-220ENST00000626028 TNFSF13O75888 250 aa20.1■□□□□ 0.81
SF1-220ENST00000626028 GOSR1O95249 250 aa20.1■□□□□ 0.81
SF1-220ENST00000626028 NUDT14O95848 222 aa20.1■□□□□ 0.81
SF1-220ENST00000626028 CBFBQ13951 182 aa20.1■□□□□ 0.81
SF1-220ENST00000626028 SGCBQ16585 318 aa20.1■□□□□ 0.81
SF1-220ENST00000626028 SLC25A53Q5H9E4 307 aa20.1■□□□□ 0.81
SF1-220ENST00000626028 TNFAIP8L2Q6P589 184 aaPredicted RBP20.1■□□□□ 0.81
SF1-220ENST00000626028 ZNF621Q6ZSS3 439 aa20.1■□□□□ 0.81
SF1-220ENST00000626028 EIF3MQ7L2H7 374 aaKnown RBP20.1■□□□□ 0.81
SF1-220ENST00000626028 GPR119Q8TDV5 335 aa20.1■□□□□ 0.81
SF1-220ENST00000626028 ADGRG7Q96K78 797 aa20.1■□□□□ 0.81
SF1-220ENST00000626028 TRNT1Q96Q11 434 aaKnown RBP20.1■□□□□ 0.81
SF1-220ENST00000626028 CCDC28BQ9BUN5 200 aa20.1■□□□□ 0.81
SF1-220ENST00000626028 GLRX2Q9NS18 164 aa20.1■□□□□ 0.81
SF1-220ENST00000626028 PRDM4Q9UKN5 801 aa20.1■□□□□ 0.81
SF1-220ENST00000626028 NPIPA5A0A0B4J1W7 369 aa20.09■□□□□ 0.81
SF1-220ENST00000626028 FAM234BA2RU67 622 aa20.09■□□□□ 0.81
SF1-220ENST00000626028 ENO4A6NNW6 628 aa20.09■□□□□ 0.81
SF1-220ENST00000626028 NPIPA7E9PJI5 369 aa20.09■□□□□ 0.81
SF1-220ENST00000626028 HMGN4O00479 90 aa20.09■□□□□ 0.81
SF1-220ENST00000626028 NPIPA8P0DM63 369 aa20.09■□□□□ 0.81
SF1-220ENST00000626028 POLR2JP52435 117 aaKnown RBP20.09■□□□□ 0.81
SF1-220ENST00000626028 STX1BP61266 288 aa20.09■□□□□ 0.81
SF1-220ENST00000626028 HPCAP84074 193 aa20.09■□□□□ 0.81
SF1-220ENST00000626028 PON3Q15166 354 aa20.09■□□□□ 0.81
SF1-220ENST00000626028 TYW3Q6IPR3 259 aaKnown RBP20.09■□□□□ 0.81
SF1-220ENST00000626028 GCNT2Q8N0V5 402 aa20.09■□□□□ 0.81
SF1-220ENST00000626028 ZNF619Q8N2I2 560 aa20.09■□□□□ 0.81
SF1-220ENST00000626028 ZNF614Q8N883 585 aa20.09■□□□□ 0.81
SF1-220ENST00000626028 FNDC9Q8TBE3 224 aa20.09■□□□□ 0.81
SF1-220ENST00000626028 POC1BQ8TC44 478 aa20.09■□□□□ 0.81
SF1-220ENST00000626028 SMPDL3BQ92485 455 aa20.09■□□□□ 0.81
SF1-220ENST00000626028 RAB8BQ92930 207 aa20.09■□□□□ 0.81
SF1-220ENST00000626028 ITCHQ96J02 903 aa20.09■□□□□ 0.81
SF1-220ENST00000626028 INPP5KQ9BT40 448 aa20.09■□□□□ 0.81
SF1-220ENST00000626028 SLCO1B3Q9NPD5 702 aa20.09■□□□□ 0.81
SF1-220ENST00000626028 TIGARQ9NQ88 270 aa20.09■□□□□ 0.81
SF1-220ENST00000626028 MKLN1Q9UL63 735 aa20.09■□□□□ 0.81
SF1-220ENST00000626028 MCTS1Q9ULC4 181 aaKnown RBP20.09■□□□□ 0.81
SF1-220ENST00000626028 POLQO75417 2590 aa20.08■□□□□ 0.81
SF1-220ENST00000626028 A8MXE2 369 aa20.08■□□□□ 0.81
SF1-220ENST00000626028 H0YC42 278 aa20.08■□□□□ 0.81
SF1-220ENST00000626028 EIF1AYO14602 144 aaKnown RBP20.08■□□□□ 0.81
SF1-220ENST00000626028 NTN1O95631 604 aa20.08■□□□□ 0.81
SF1-220ENST00000626028 CSTAP01040 98 aa20.08■□□□□ 0.81
SF1-220ENST00000626028 PRKCAP17252 672 aa20.08■□□□□ 0.81
SF1-220ENST00000626028 TPD52P55327 224 aaPredicted RBP20.08■□□□□ 0.81
SF1-220ENST00000626028 SKP2Q13309 424 aa20.08■□□□□ 0.81
SF1-220ENST00000626028 CTU2Q2VPK5 515 aaKnown RBP20.08■□□□□ 0.81
SF1-220ENST00000626028 RNF130Q86XS8 419 aa20.08■□□□□ 0.81
SF1-220ENST00000626028 LILRA2Q8N149 483 aa20.08■□□□□ 0.81
SF1-220ENST00000626028 FAM71CQ8NEG0 241 aa20.08■□□□□ 0.81
SF1-220ENST00000626028 OR10D3Q8NH80 312 aa20.08■□□□□ 0.81
SF1-220ENST00000626028 TMEM234Q8WY98 164 aa20.08■□□□□ 0.81
SF1-220ENST00000626028 ST8SIA1Q92185 356 aa20.08■□□□□ 0.81
SF1-220ENST00000626028 FIG4Q92562 907 aa20.08■□□□□ 0.81
SF1-220ENST00000626028 MAGEB18Q96M61 343 aa20.08■□□□□ 0.81
SF1-220ENST00000626028 RBM24Q9BX46 236 aaKnown RBP20.08■□□□□ 0.81
SF1-220ENST00000626028 THUMPD1Q9NXG2 353 aaKnown RBP20.08■□□□□ 0.81
SF1-220ENST00000626028 KCNE5Q9UJ90 142 aa20.08■□□□□ 0.81
SF1-220ENST00000626028 CSMD2Q7Z408 3487 aa20.08■□□□□ 0.8
SF1-220ENST00000626028 SPG11Q96JI7 2443 aa20.07■□□□□ 0.8
SF1-220ENST00000626028 SHISA8B8ZZ34 492 aa20.07■□□□□ 0.8
SF1-220ENST00000626028 C9JVG2 144 aa20.07■□□□□ 0.8
SF1-220ENST00000626028 CDKN2CP42773 168 aa20.07■□□□□ 0.8
SF1-220ENST00000626028 EIF1AXP47813 144 aaKnown RBP20.07■□□□□ 0.8
SF1-220ENST00000626028 AGFG1P52594 562 aaKnown RBP20.07■□□□□ 0.8
SF1-220ENST00000626028 FUT5Q11128 374 aa20.07■□□□□ 0.8
SF1-220ENST00000626028 DAZAP2Q15038 168 aaPredicted RBP20.07■□□□□ 0.8
SF1-220ENST00000626028 GUSBP1Q15486 140 aa20.07■□□□□ 0.8
SF1-220ENST00000626028 GPAT3Q53EU6 434 aa20.07■□□□□ 0.8
SF1-220ENST00000626028 GTF2IRD2BQ6EKJ0 949 aa20.07■□□□□ 0.8
SF1-220ENST00000626028 FRRS1Q6ZNA5 592 aa20.07■□□□□ 0.8
SF1-220ENST00000626028 GTF2IRD2Q86UP8 949 aa20.07■□□□□ 0.8
SF1-220ENST00000626028 CMIPQ8IY22 773 aa20.07■□□□□ 0.8
SF1-220ENST00000626028 OR2V1Q8NHB1 315 aa20.07■□□□□ 0.8
SF1-220ENST00000626028 ZFP90Q8TF47 636 aa20.07■□□□□ 0.8
SF1-220ENST00000626028 CKAP2Q8WWK9 683 aa20.07■□□□□ 0.8
SF1-220ENST00000626028 ZNF845Q96IR2 970 aaPredicted RBP20.07■□□□□ 0.8
SF1-220ENST00000626028 KLHL15Q96M94 604 aa20.07■□□□□ 0.8
SF1-220ENST00000626028 EXOSC3Q9NQT5 275 aaKnown RBP20.07■□□□□ 0.8
SF1-220ENST00000626028 TUBAL3A6NHL2 446 aa20.06■□□□□ 0.8
SF1-220ENST00000626028 OIP5O43482 229 aa20.06■□□□□ 0.8
SF1-220ENST00000626028 SYNGR4O95473 234 aa20.06■□□□□ 0.8
SF1-220ENST00000626028 PABPC4LP0CB38 370 aaKnown RBP20.06■□□□□ 0.8
SF1-220ENST00000626028 CD8BP10966 210 aa20.06■□□□□ 0.8
SF1-220ENST00000626028 PGCP20142 388 aa20.06■□□□□ 0.8
SF1-220ENST00000626028 PGM1P36871 562 aa20.06■□□□□ 0.8
SF1-220ENST00000626028 KIR2DL2P43627 348 aaPredicted RBP20.06■□□□□ 0.8
SF1-220ENST00000626028 CPA2P48052 419 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms