RNA–Protein interactions for RNA: ENST00000622183.1

CPNE3-213, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 156 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-213ENST00000622183 OR1F12Q8NHA8 337 aa3.74□□□□□ -1.81
CPNE3-213ENST00000622183 GTSF1Q8WW33 167 aa3.74□□□□□ -1.81
CPNE3-213ENST00000622183 BADQ92934 168 aa3.74□□□□□ -1.81
CPNE3-213ENST00000622183 FOXN4Q96NZ1 517 aa3.74□□□□□ -1.81
CPNE3-213ENST00000622183 CCT8L2Q96SF2 557 aa3.74□□□□□ -1.81
CPNE3-213ENST00000622183 MYCBPQ99417 103 aaPredicted RBP3.74□□□□□ -1.81
CPNE3-213ENST00000622183 TUBGCP2Q9BSJ2 902 aa3.74□□□□□ -1.81
CPNE3-213ENST00000622183 EDEM2Q9BV94 578 aa3.74□□□□□ -1.81
CPNE3-213ENST00000622183 NXF5Q9H1B4 397 aaKnown RBP3.74□□□□□ -1.81
CPNE3-213ENST00000622183 IKZF5Q9H5V7 419 aa3.74□□□□□ -1.81
CPNE3-213ENST00000622183 MIEF1Q9NQG6 463 aa3.74□□□□□ -1.81
CPNE3-213ENST00000622183 SPRR3Q9UBC9 169 aa3.74□□□□□ -1.81
CPNE3-213ENST00000622183 RSPH14Q9UHP6 348 aa3.74□□□□□ -1.81
CPNE3-213ENST00000622183 RIMS3Q9UJD0 308 aa3.74□□□□□ -1.81
CPNE3-213ENST00000622183 CACNA1FO60840 1977 aa3.73□□□□□ -1.81
CPNE3-213ENST00000622183 IGHV2-70DA0A0C4DH43 119 aa3.73□□□□□ -1.81
CPNE3-213ENST00000622183 TAPBPO15533 448 aa3.73□□□□□ -1.81
CPNE3-213ENST00000622183 NUDT21O43809 227 aaKnown RBP3.73□□□□□ -1.81
CPNE3-213ENST00000622183 TSC22D2O75157 780 aa3.73□□□□□ -1.81
CPNE3-213ENST00000622183 CABYRO75952 493 aa3.73□□□□□ -1.81
CPNE3-213ENST00000622183 CAPN1P07384 714 aa3.73□□□□□ -1.81
CPNE3-213ENST00000622183 GCFC2P16383 781 aaKnown RBP3.73□□□□□ -1.81
CPNE3-213ENST00000622183 CYP2B6P20813 491 aa3.73□□□□□ -1.81
CPNE3-213ENST00000622183 NMT1P30419 496 aaKnown RBP3.73□□□□□ -1.81
CPNE3-213ENST00000622183 GRIA1P42261 906 aa3.73□□□□□ -1.81
CPNE3-213ENST00000622183 P2RY1P47900 373 aa3.73□□□□□ -1.81
CPNE3-213ENST00000622183 DHPSP49366 369 aaPredicted RBP3.73□□□□□ -1.81
CPNE3-213ENST00000622183 ASAH1Q13510 395 aa3.73□□□□□ -1.81
CPNE3-213ENST00000622183 TGIF1Q15583 401 aa3.73□□□□□ -1.81
CPNE3-213ENST00000622183 METTL11BQ5VVY1 283 aa3.73□□□□□ -1.81
CPNE3-213ENST00000622183 FAM199XQ6PEV8 388 aaPredicted RBP3.73□□□□□ -1.81
CPNE3-213ENST00000622183 CCDC80Q76M96 950 aa3.73□□□□□ -1.81
CPNE3-213ENST00000622183 NLRP9Q7RTR0 991 aa3.73□□□□□ -1.81
CPNE3-213ENST00000622183 MYPOPQ86VE0 399 aaPredicted RBP3.73□□□□□ -1.81
CPNE3-213ENST00000622183 MARCH9Q86YJ5 346 aa3.73□□□□□ -1.81
CPNE3-213ENST00000622183 GPR65Q8IYL9 337 aa3.73□□□□□ -1.81
CPNE3-213ENST00000622183 PSMG2Q969U7 264 aa3.73□□□□□ -1.81
CPNE3-213ENST00000622183 CELF6Q96J87 481 aaKnown RBP3.73□□□□□ -1.81
CPNE3-213ENST00000622183 TMEM43Q9BTV4 400 aa3.73□□□□□ -1.81
CPNE3-213ENST00000622183 TSSK1BQ9BXA7 367 aa3.73□□□□□ -1.81
CPNE3-213ENST00000622183 GLIPR2Q9H4G4 154 aa3.73□□□□□ -1.81
CPNE3-213ENST00000622183 CAB39LQ9H9S4 337 aa3.73□□□□□ -1.81
CPNE3-213ENST00000622183 SLC17A5Q9NRA2 495 aa3.73□□□□□ -1.81
CPNE3-213ENST00000622183 SMOXQ9NWM0 555 aa3.73□□□□□ -1.81
CPNE3-213ENST00000622183 SIGLEC8Q9NYZ4 499 aa3.73□□□□□ -1.81
CPNE3-213ENST00000622183 LCMT1Q9UIC8 334 aa3.73□□□□□ -1.81
CPNE3-213ENST00000622183 PTBP2Q9UKA9 531 aaKnown RBP3.73□□□□□ -1.81
CPNE3-213ENST00000622183 CLEC4AQ9UMR7 237 aa3.73□□□□□ -1.81
CPNE3-213ENST00000622183 SCML2Q9UQR0 700 aa3.73□□□□□ -1.81
CPNE3-213ENST00000622183 ASB3Q9Y575 518 aa3.73□□□□□ -1.81
CPNE3-213ENST00000622183 TRAV26-1A0A087WT03 109 aa3.72□□□□□ -1.81
CPNE3-213ENST00000622183 LOC100131303A0A0U1RQF7 123 aa3.72□□□□□ -1.81
CPNE3-213ENST00000622183 A0A1W2PQ72 361 aa3.72□□□□□ -1.81
CPNE3-213ENST00000622183 FCN1O00602 326 aa3.72□□□□□ -1.81
CPNE3-213ENST00000622183 ZNF208O43345 1280 aa3.72□□□□□ -1.81
CPNE3-213ENST00000622183 BCL2L11O43521 198 aa3.72□□□□□ -1.81
CPNE3-213ENST00000622183 N4BP1O75113 896 aaKnown RBP3.72□□□□□ -1.81
CPNE3-213ENST00000622183 GPX5O75715 221 aa3.72□□□□□ -1.81
CPNE3-213ENST00000622183 UGT2B17O75795 530 aa3.72□□□□□ -1.81
CPNE3-213ENST00000622183 SCGNO76038 276 aa3.72□□□□□ -1.81
CPNE3-213ENST00000622183 IL1BP01584 269 aa3.72□□□□□ -1.81
CPNE3-213ENST00000622183 CALB2P22676 271 aa3.72□□□□□ -1.81
CPNE3-213ENST00000622183 MMP11P24347 488 aa3.72□□□□□ -1.81
CPNE3-213ENST00000622183 STARP49675 285 aa3.72□□□□□ -1.81
CPNE3-213ENST00000622183 RPL32P62910 135 aaKnown RBP3.72□□□□□ -1.81
CPNE3-213ENST00000622183 CD47Q08722 323 aa3.72□□□□□ -1.81
CPNE3-213ENST00000622183 ELAVL3Q14576 367 aaKnown RBP3.72□□□□□ -1.81
CPNE3-213ENST00000622183 PAN3Q58A45 887 aaKnown RBP3.72□□□□□ -1.81
CPNE3-213ENST00000622183 ATAD3CQ5T2N8 411 aa3.72□□□□□ -1.81
CPNE3-213ENST00000622183 CGB2Q6NT52 195 aa3.72□□□□□ -1.81
CPNE3-213ENST00000622183 Q6ZPB1 254 aaPredicted RBP3.72□□□□□ -1.81
CPNE3-213ENST00000622183 TPRA1Q86W33 373 aa3.72□□□□□ -1.81
CPNE3-213ENST00000622183 UBQLNLQ8IYU4 475 aa3.72□□□□□ -1.81
CPNE3-213ENST00000622183 CLEC4FQ8N1N0 589 aa3.72□□□□□ -1.81
CPNE3-213ENST00000622183 SLC39A11Q8N1S5 342 aa3.72□□□□□ -1.81
CPNE3-213ENST00000622183 KIR3DL3Q8N743 410 aa3.72□□□□□ -1.81
CPNE3-213ENST00000622183 KLHL30-AS1Q8NEE0 82 aa3.72□□□□□ -1.81
CPNE3-213ENST00000622183 OR51G2Q8NGK0 314 aa3.72□□□□□ -1.81
CPNE3-213ENST00000622183 N4BP2L2Q92802 583 aaPredicted RBP3.72□□□□□ -1.81
CPNE3-213ENST00000622183 SIGLEC12Q96PQ1 595 aa3.72□□□□□ -1.81
CPNE3-213ENST00000622183 ZBTB18Q99592 522 aa3.72□□□□□ -1.81
CPNE3-213ENST00000622183 LRRN3Q9H3W5 708 aa3.72□□□□□ -1.81
CPNE3-213ENST00000622183 PAK1IP1Q9NWT1 392 aaPredicted RBP3.72□□□□□ -1.81
CPNE3-213ENST00000622183 IL36GQ9NZH8 169 aa3.72□□□□□ -1.81
CPNE3-213ENST00000622183 LRP5LA4QPB2 252 aa3.71□□□□□ -1.82
CPNE3-213ENST00000622183 RS1O15537 224 aa3.71□□□□□ -1.82
CPNE3-213ENST00000622183 DBTP11182 482 aaKnown RBP3.71□□□□□ -1.82
CPNE3-213ENST00000622183 GDF1P27539 372 aa3.71□□□□□ -1.82
CPNE3-213ENST00000622183 ADORA2BP29275 332 aa3.71□□□□□ -1.82
CPNE3-213ENST00000622183 RPL29P47914 159 aaKnown RBP3.71□□□□□ -1.82
CPNE3-213ENST00000622183 AIF1P55008 147 aa3.71□□□□□ -1.82
CPNE3-213ENST00000622183 MRPS11P82912 194 aaKnown RBP3.71□□□□□ -1.82
CPNE3-213ENST00000622183 HMGN5P82970 282 aaKnown RBP3.71□□□□□ -1.82
CPNE3-213ENST00000622183 KRTAP1-1Q07627 177 aa3.71□□□□□ -1.82
CPNE3-213ENST00000622183 FGL1Q08830 312 aa3.71□□□□□ -1.82
CPNE3-213ENST00000622183 C1orf61Q13536 156 aa3.71□□□□□ -1.82
CPNE3-213ENST00000622183 LRRC75A-AS1Q8N1F1 130 aa3.71□□□□□ -1.82
CPNE3-213ENST00000622183 GPR137CQ8N3F9 429 aa3.71□□□□□ -1.82
CPNE3-213ENST00000622183 RHOXF1Q8NHV9 184 aa3.71□□□□□ -1.82
CPNE3-213ENST00000622183 TYMSOSQ8TAI1 123 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms