RNA–Protein interactions for RNA: ENST00000620507.4

RBFOX1-223, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 5 BASIC

Gene RBFOX1, Length 4,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-223ENST00000620507 NID1P14543 1247 aa8.57□□□□□ -1.04
RBFOX1-223ENST00000620507 HTR1FP30939 366 aa8.57□□□□□ -1.04
RBFOX1-223ENST00000620507 GRK5P34947 590 aa8.57□□□□□ -1.04
RBFOX1-223ENST00000620507 ATP12AP54707 1039 aa8.57□□□□□ -1.04
RBFOX1-223ENST00000620507 POU4F2Q12837 409 aa8.57□□□□□ -1.04
RBFOX1-223ENST00000620507 ALG11Q2TAA5 492 aa8.57□□□□□ -1.04
RBFOX1-223ENST00000620507 ARHGAP11BQ3KRB8 267 aa8.57□□□□□ -1.04
RBFOX1-223ENST00000620507 USP53Q70EK8 1073 aa8.57□□□□□ -1.04
RBFOX1-223ENST00000620507 MS4A15Q8N5U1 240 aa8.57□□□□□ -1.04
RBFOX1-223ENST00000620507 SYT14Q8NB59 555 aa8.57□□□□□ -1.04
RBFOX1-223ENST00000620507 TCF7L1Q9HCS4 588 aa8.57□□□□□ -1.04
RBFOX1-223ENST00000620507 ATP13A2Q9NQ11 1180 aa8.57□□□□□ -1.04
RBFOX1-223ENST00000620507 AKAP7Q9P0M2 348 aaPredicted RBP8.57□□□□□ -1.04
RBFOX1-223ENST00000620507 SLC35A3Q9Y2D2 325 aa8.57□□□□□ -1.04
RBFOX1-223ENST00000620507 MRPS17Q9Y2R5 130 aaKnown RBP8.57□□□□□ -1.04
RBFOX1-223ENST00000620507 SLC22A7Q9Y694 548 aa8.57□□□□□ -1.04
RBFOX1-223ENST00000620507 A0A1W2PS29 197 aa8.57□□□□□ -1.04
RBFOX1-223ENST00000620507 HTR3EA5X5Y0 456 aa8.57□□□□□ -1.04
RBFOX1-223ENST00000620507 ZNF879B4DU55 563 aa8.57□□□□□ -1.04
RBFOX1-223ENST00000620507 MCIDASD6RGH6 385 aa8.57□□□□□ -1.04
RBFOX1-223ENST00000620507 HPGDSO60760 199 aa8.57□□□□□ -1.04
RBFOX1-223ENST00000620507 KHDRBS3O75525 346 aaKnown RBP8.57□□□□□ -1.04
RBFOX1-223ENST00000620507 PROS1P07225 676 aa8.57□□□□□ -1.04
RBFOX1-223ENST00000620507 TACSTD2P09758 323 aa8.57□□□□□ -1.04
RBFOX1-223ENST00000620507 TGM1P22735 817 aa8.57□□□□□ -1.04
RBFOX1-223ENST00000620507 CXCR1P25024 350 aa8.57□□□□□ -1.04
RBFOX1-223ENST00000620507 CAPZA2P47755 286 aa8.57□□□□□ -1.04
RBFOX1-223ENST00000620507 PITPNAQ00169 270 aa8.57□□□□□ -1.04
RBFOX1-223ENST00000620507 ERV3-1Q14264 604 aa8.57□□□□□ -1.04
RBFOX1-223ENST00000620507 SSX1Q16384 188 aa8.57□□□□□ -1.04
RBFOX1-223ENST00000620507 FBXO42Q6P3S6 717 aa8.57□□□□□ -1.04
RBFOX1-223ENST00000620507 ZCCHC12Q6PEW1 402 aa8.57□□□□□ -1.04
RBFOX1-223ENST00000620507 ZNF620Q6ZNG0 422 aa8.57□□□□□ -1.04
RBFOX1-223ENST00000620507 TSEN54Q7Z6J9 526 aaKnown RBP8.57□□□□□ -1.04
RBFOX1-223ENST00000620507 TOMM5Q8N4H5 51 aa8.57□□□□□ -1.04
RBFOX1-223ENST00000620507 ASB15Q8WXK1 588 aa8.57□□□□□ -1.04
RBFOX1-223ENST00000620507 SLC25A36Q96CQ1 311 aa8.57□□□□□ -1.04
RBFOX1-223ENST00000620507 ZMYND19Q96E35 227 aaPredicted RBP8.57□□□□□ -1.04
RBFOX1-223ENST00000620507 SLC25A19Q9HC21 320 aa8.57□□□□□ -1.04
RBFOX1-223ENST00000620507 LYRM4Q9HD34 91 aa8.57□□□□□ -1.04
RBFOX1-223ENST00000620507 NLKQ9UBE8 527 aa8.57□□□□□ -1.04
RBFOX1-223ENST00000620507 TRBV2A0A0J9YWF9 115 aa8.56□□□□□ -1.04
RBFOX1-223ENST00000620507 DSCR3O14972 297 aa8.56□□□□□ -1.04
RBFOX1-223ENST00000620507 SEC16AO15027 2179 aa8.56□□□□□ -1.04
RBFOX1-223ENST00000620507 YES1P07947 543 aa8.56□□□□□ -1.04
RBFOX1-223ENST00000620507 CPEP16870 476 aa8.56□□□□□ -1.04
RBFOX1-223ENST00000620507 DUSP8Q13202 625 aa8.56□□□□□ -1.04
RBFOX1-223ENST00000620507 CELF2-AS1Q8N7Q2 184 aa8.56□□□□□ -1.04
RBFOX1-223ENST00000620507 SLC25A46Q96AG3 418 aa8.56□□□□□ -1.04
RBFOX1-223ENST00000620507 ADAD1Q96M93 576 aaKnown RBP8.56□□□□□ -1.04
RBFOX1-223ENST00000620507 LHX9Q9NQ69 397 aa8.56□□□□□ -1.04
RBFOX1-223ENST00000620507 KCMF1Q9P0J7 381 aa8.56□□□□□ -1.04
RBFOX1-223ENST00000620507 ERVK-19Q9WJR5 959 aa8.56□□□□□ -1.04
RBFOX1-223ENST00000620507 GPR55Q9Y2T6 319 aaPredicted RBP8.56□□□□□ -1.04
RBFOX1-223ENST00000620507 YBX2Q9Y2T7 364 aaKnown RBP8.56□□□□□ -1.04
RBFOX1-223ENST00000620507 IGKV1-8A0A0C4DH67 115 aa8.56□□□□□ -1.04
RBFOX1-223ENST00000620507 A8MU76 341 aa8.56□□□□□ -1.04
RBFOX1-223ENST00000620507 SLC2A10O95528 541 aa8.56□□□□□ -1.04
RBFOX1-223ENST00000620507 RENP00797 406 aa8.56□□□□□ -1.04
RBFOX1-223ENST00000620507 THBS1P07996 1170 aa8.56□□□□□ -1.04
RBFOX1-223ENST00000620507 HBQ1P09105 142 aa8.56□□□□□ -1.04
RBFOX1-223ENST00000620507 PXNP49023 591 aaPredicted RBP8.56□□□□□ -1.04
RBFOX1-223ENST00000620507 RAB38P57729 211 aa8.56□□□□□ -1.04
RBFOX1-223ENST00000620507 PSPHP78330 225 aa8.56□□□□□ -1.04
RBFOX1-223ENST00000620507 ZNF425Q6IV72 752 aa8.56□□□□□ -1.04
RBFOX1-223ENST00000620507 ULK3Q6PHR2 472 aa8.56□□□□□ -1.04
RBFOX1-223ENST00000620507 SYCE2Q6PIF2 218 aa8.56□□□□□ -1.04
RBFOX1-223ENST00000620507 VN1R4Q7Z5H5 301 aa8.56□□□□□ -1.04
RBFOX1-223ENST00000620507 UXS1Q8NBZ7 420 aa8.56□□□□□ -1.04
RBFOX1-223ENST00000620507 SDR9C7Q8NEX9 313 aa8.56□□□□□ -1.04
RBFOX1-223ENST00000620507 SMPDL3BQ92485 455 aa8.56□□□□□ -1.04
RBFOX1-223ENST00000620507 RFT1Q96AA3 541 aa8.56□□□□□ -1.04
RBFOX1-223ENST00000620507 CNN2Q99439 309 aaKnown RBP8.56□□□□□ -1.04
RBFOX1-223ENST00000620507 HINT3Q9NQE9 182 aaKnown RBP8.56□□□□□ -1.04
RBFOX1-223ENST00000620507 NANSQ9NR45 359 aa8.56□□□□□ -1.04
RBFOX1-223ENST00000620507 IER3IP1Q9Y5U9 82 aa8.56□□□□□ -1.04
RBFOX1-223ENST00000620507 ARPC4-TTLL3A0A0A6YYG9 625 aa8.56□□□□□ -1.04
RBFOX1-223ENST00000620507 INMT-MINDY4F8WBC2 141 aa8.56□□□□□ -1.04
RBFOX1-223ENST00000620507 NCR1O76036 304 aa8.56□□□□□ -1.04
RBFOX1-223ENST00000620507 FUT1P19526 365 aa8.56□□□□□ -1.04
RBFOX1-223ENST00000620507 NR4A2P43354 598 aa8.56□□□□□ -1.04
RBFOX1-223ENST00000620507 TGM4P49221 684 aa8.56□□□□□ -1.04
RBFOX1-223ENST00000620507 CDK5Q00535 292 aa8.56□□□□□ -1.04
RBFOX1-223ENST00000620507 TMEM201Q5SNT2 666 aa8.56□□□□□ -1.04
RBFOX1-223ENST00000620507 MRM1Q6IN84 353 aaKnown RBP8.56□□□□□ -1.04
RBFOX1-223ENST00000620507 TTLL10Q6ZVT0 673 aa8.56□□□□□ -1.04
RBFOX1-223ENST00000620507 GDPD3Q7L5L3 318 aa8.56□□□□□ -1.04
RBFOX1-223ENST00000620507 LINGO2Q7L985 606 aa8.56□□□□□ -1.04
RBFOX1-223ENST00000620507 GPR155Q7Z3F1 870 aa8.56□□□□□ -1.04
RBFOX1-223ENST00000620507 C7orf57Q8NEG2 295 aa8.56□□□□□ -1.04
RBFOX1-223ENST00000620507 ARSGQ96EG1 525 aa8.56□□□□□ -1.04
RBFOX1-223ENST00000620507 ZDHHC12Q96GR4 267 aa8.56□□□□□ -1.04
RBFOX1-223ENST00000620507 C4orf36Q96KX1 117 aa8.56□□□□□ -1.04
RBFOX1-223ENST00000620507 ABCG5Q9H222 651 aa8.56□□□□□ -1.04
RBFOX1-223ENST00000620507 C6orf106Q9H6K1 298 aaPredicted RBP8.56□□□□□ -1.04
RBFOX1-223ENST00000620507 PCDHGB2Q9Y5G2 931 aa8.56□□□□□ -1.04
RBFOX1-223ENST00000620507 MAU2Q9Y6X3 613 aa8.56□□□□□ -1.04
RBFOX1-223ENST00000620507 PMF1-BGLAPU3KQ54 211 aa8.56□□□□□ -1.04
RBFOX1-223ENST00000620507 ARID1BQ8NFD5 2236 aaPredicted RBP8.56□□□□□ -1.04
RBFOX1-223ENST00000620507 CACNA1CQ13936 2221 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms