RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 GATSQ8NAP1 163 aa7.33□□□□□ -1.24
CPNE3-209ENST00000620393 TOR1AIP2Q8NFQ8 470 aa7.33□□□□□ -1.24
CPNE3-209ENST00000620393 OR2T29Q8NH02 315 aa7.33□□□□□ -1.24
CPNE3-209ENST00000620393 PHF10Q8WUB8 498 aaKnown RBP7.33□□□□□ -1.24
CPNE3-209ENST00000620393 SNRNP27Q8WVK2 155 aaKnown RBP7.33□□□□□ -1.24
CPNE3-209ENST00000620393 NR4A3Q92570 626 aa7.33□□□□□ -1.24
CPNE3-209ENST00000620393 CENPNQ96H22 339 aaPredicted RBP7.33□□□□□ -1.24
CPNE3-209ENST00000620393 FRMD6Q96NE9 622 aa7.33□□□□□ -1.24
CPNE3-209ENST00000620393 MCHR1Q99705 422 aa7.33□□□□□ -1.24
CPNE3-209ENST00000620393 PIP5K1AQ99755 562 aa7.33□□□□□ -1.24
CPNE3-209ENST00000620393 ZNF559Q9BR84 538 aa7.33□□□□□ -1.24
CPNE3-209ENST00000620393 BDH2Q9BUT1 245 aa7.33□□□□□ -1.24
CPNE3-209ENST00000620393 POLR2J2Q9GZM3 115 aaKnown RBP7.33□□□□□ -1.24
CPNE3-209ENST00000620393 POLR2J3Q9H1A7 115 aaKnown RBP7.33□□□□□ -1.24
CPNE3-209ENST00000620393 RASSF4Q9H2L5 321 aa7.33□□□□□ -1.24
CPNE3-209ENST00000620393 METTL7AQ9H8H3 244 aa7.33□□□□□ -1.24
CPNE3-209ENST00000620393 PROK2Q9HC23 129 aa7.33□□□□□ -1.24
CPNE3-209ENST00000620393 CPNE5Q9HCH3 593 aa7.33□□□□□ -1.24
CPNE3-209ENST00000620393 TIMMDC1Q9NPL8 285 aa7.33□□□□□ -1.24
CPNE3-209ENST00000620393 AGPAT4Q9NRZ5 378 aa7.33□□□□□ -1.24
CPNE3-209ENST00000620393 ANKRD10Q9NXR5 420 aa7.33□□□□□ -1.24
CPNE3-209ENST00000620393 KLRF1Q9NZS2 232 aa7.33□□□□□ -1.24
CPNE3-209ENST00000620393 ACAD8Q9UKU7 415 aa7.33□□□□□ -1.24
CPNE3-209ENST00000620393 ICAM5Q9UMF0 924 aa7.33□□□□□ -1.24
CPNE3-209ENST00000620393 A4GNTQ9UNA3 340 aa7.33□□□□□ -1.24
CPNE3-209ENST00000620393 SPTBN4Q9H254 2564 aa7.33□□□□□ -1.24
CPNE3-209ENST00000620393 URB1O60287 2271 aaKnown RBP7.32□□□□□ -1.24
CPNE3-209ENST00000620393 OR5H15A6NDH6 313 aa7.32□□□□□ -1.24
CPNE3-209ENST00000620393 J3KTA2 159 aa7.32□□□□□ -1.24
CPNE3-209ENST00000620393 FAAHO00519 579 aa7.32□□□□□ -1.24
CPNE3-209ENST00000620393 GNGT2O14610 69 aa7.32□□□□□ -1.24
CPNE3-209ENST00000620393 FFAR1O14842 300 aa7.32□□□□□ -1.24
CPNE3-209ENST00000620393 HCRTR2O43614 444 aa7.32□□□□□ -1.24
CPNE3-209ENST00000620393 ADAM11O75078 769 aa7.32□□□□□ -1.24
CPNE3-209ENST00000620393 CYP7B1O75881 506 aa7.32□□□□□ -1.24
CPNE3-209ENST00000620393 NEURL1O76050 574 aa7.32□□□□□ -1.24
CPNE3-209ENST00000620393 DIRAS1O95057 198 aa7.32□□□□□ -1.24
CPNE3-209ENST00000620393 P04436 131 aa7.32□□□□□ -1.24
CPNE3-209ENST00000620393 LINGO3P0C6S8 592 aa7.32□□□□□ -1.24
CPNE3-209ENST00000620393 CNR1P21554 472 aa7.32□□□□□ -1.24
CPNE3-209ENST00000620393 IFNA8P32881 189 aa7.32□□□□□ -1.24
CPNE3-209ENST00000620393 RYKP34925 604 aa7.32□□□□□ -1.24
CPNE3-209ENST00000620393 SLC6A8P48029 635 aa7.32□□□□□ -1.24
CPNE3-209ENST00000620393 P2RX1P51575 399 aa7.32□□□□□ -1.24
CPNE3-209ENST00000620393 TMPRSS3P57727 454 aa7.32□□□□□ -1.24
CPNE3-209ENST00000620393 SMIM11AP58511 58 aa7.32□□□□□ -1.24
CPNE3-209ENST00000620393 ZNF117Q03924 483 aa7.32□□□□□ -1.24
CPNE3-209ENST00000620393 SKP2Q13309 424 aa7.32□□□□□ -1.24
CPNE3-209ENST00000620393 OR1Q1Q15612 314 aa7.32□□□□□ -1.24
CPNE3-209ENST00000620393 OR1C1Q15619 314 aa7.32□□□□□ -1.24
CPNE3-209ENST00000620393 NDUFAF6Q330K2 333 aa7.32□□□□□ -1.24
CPNE3-209ENST00000620393 ENTPD8Q5MY95 495 aa7.32□□□□□ -1.24
CPNE3-209ENST00000620393 BICRALQ6AI39 1079 aa7.32□□□□□ -1.24
CPNE3-209ENST00000620393 SLC25A25Q6KCM7 469 aa7.32□□□□□ -1.24
CPNE3-209ENST00000620393 DEF8Q6ZN54 512 aa7.32□□□□□ -1.24
CPNE3-209ENST00000620393 ZNF605Q86T29 641 aa7.32□□□□□ -1.24
CPNE3-209ENST00000620393 RANBP3LQ86VV4 465 aaPredicted RBP7.32□□□□□ -1.24
CPNE3-209ENST00000620393 WDSUB1Q8N9V3 476 aa7.32□□□□□ -1.24
CPNE3-209ENST00000620393 PIK3C3Q8NEB9 887 aa7.32□□□□□ -1.24
CPNE3-209ENST00000620393 OR5W2Q8NH69 310 aa7.32□□□□□ -1.24
CPNE3-209ENST00000620393 B4GALNT2Q8NHY0 566 aa7.32□□□□□ -1.24
CPNE3-209ENST00000620393 GPR119Q8TDV5 335 aa7.32□□□□□ -1.24
CPNE3-209ENST00000620393 ARSGQ96EG1 525 aa7.32□□□□□ -1.24
CPNE3-209ENST00000620393 DHRS1Q96LJ7 313 aa7.32□□□□□ -1.24
CPNE3-209ENST00000620393 PRRC1Q96M27 445 aa7.32□□□□□ -1.24
CPNE3-209ENST00000620393 SIGLEC12Q96PQ1 595 aa7.32□□□□□ -1.24
CPNE3-209ENST00000620393 SMAD5Q99717 465 aaKnown RBP7.32□□□□□ -1.24
CPNE3-209ENST00000620393 FNDC11Q9BVV2 318 aa7.32□□□□□ -1.24
CPNE3-209ENST00000620393 OSBPL11Q9BXB4 747 aa7.32□□□□□ -1.24
CPNE3-209ENST00000620393 TRIM2Q9C040 744 aa7.32□□□□□ -1.24
CPNE3-209ENST00000620393 SEMA6AQ9H2E6 1030 aa7.32□□□□□ -1.24
CPNE3-209ENST00000620393 NMNAT1Q9HAN9 279 aaPredicted RBP7.32□□□□□ -1.24
CPNE3-209ENST00000620393 TMEM27Q9HBJ8 222 aa7.32□□□□□ -1.24
CPNE3-209ENST00000620393 GALNT9Q9HCQ5 603 aa7.32□□□□□ -1.24
CPNE3-209ENST00000620393 SACM1LQ9NTJ5 587 aa7.32□□□□□ -1.24
CPNE3-209ENST00000620393 ACER3Q9NUN7 267 aa7.32□□□□□ -1.24
CPNE3-209ENST00000620393 TESQ9UGI8 421 aaKnown RBP7.32□□□□□ -1.24
CPNE3-209ENST00000620393 RIMS3Q9UJD0 308 aa7.32□□□□□ -1.24
CPNE3-209ENST00000620393 NTNG1Q9Y2I2 539 aa7.32□□□□□ -1.24
CPNE3-209ENST00000620393 WIF1Q9Y5W5 379 aa7.32□□□□□ -1.24
CPNE3-209ENST00000620393 TRAPPC13A5PLN9 417 aa7.31□□□□□ -1.24
CPNE3-209ENST00000620393 TMEM8BA6NDV4 472 aa7.31□□□□□ -1.24
CPNE3-209ENST00000620393 C17orf51A8MQB3 221 aa7.31□□□□□ -1.24
CPNE3-209ENST00000620393 TNFRSF11BO00300 401 aa7.31□□□□□ -1.24
CPNE3-209ENST00000620393 ADAMDEC1O15204 470 aa7.31□□□□□ -1.24
CPNE3-209ENST00000620393 TRIM3O75382 744 aaPredicted RBP7.31□□□□□ -1.24
CPNE3-209ENST00000620393 OR5F1O95221 314 aa7.31□□□□□ -1.24
CPNE3-209ENST00000620393 APC2O95996 2303 aa7.31□□□□□ -1.24
CPNE3-209ENST00000620393 F10P00742 488 aa7.31□□□□□ -1.24
CPNE3-209ENST00000620393 H1F0P07305 194 aaKnown RBP7.31□□□□□ -1.24
CPNE3-209ENST00000620393 SP1P08047 785 aa7.31□□□□□ -1.24
CPNE3-209ENST00000620393 THRBP10828 461 aa7.31□□□□□ -1.24
CPNE3-209ENST00000620393 UQCRBP14927 111 aa7.31□□□□□ -1.24
CPNE3-209ENST00000620393 PGCP20142 388 aa7.31□□□□□ -1.24
CPNE3-209ENST00000620393 FUT4P22083 530 aa7.31□□□□□ -1.24
CPNE3-209ENST00000620393 HTR2AP28223 471 aa7.31□□□□□ -1.24
CPNE3-209ENST00000620393 RRM2P31350 389 aa7.31□□□□□ -1.24
CPNE3-209ENST00000620393 DNAJA1P31689 397 aaKnown RBP7.31□□□□□ -1.24
CPNE3-209ENST00000620393 GCKP35557 465 aa7.31□□□□□ -1.24
CPNE3-209ENST00000620393 IDH2P48735 452 aaKnown RBP7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms