RNA–Protein interactions for RNA: ENST00000618395.4

COL5A1-208, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL5A1, Length 8,437 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-208ENST00000618395 OR13C4Q8NGS5 318 aa14.2□□□□□ -0.14
COL5A1-208ENST00000618395 MAGEH1Q9H213 219 aa14.2□□□□□ -0.14
COL5A1-208ENST00000618395 ZNF623O75123 536 aa14.2□□□□□ -0.14
COL5A1-208ENST00000618395 JTBO76095 146 aa14.2□□□□□ -0.14
COL5A1-208ENST00000618395 SPATA31C1P0DKV0 1188 aa14.2□□□□□ -0.14
COL5A1-208ENST00000618395 OMGP23515 440 aa14.2□□□□□ -0.14
COL5A1-208ENST00000618395 ZBTB37Q5TC79 503 aa14.2□□□□□ -0.14
COL5A1-208ENST00000618395 C9orf57Q5W0N0 161 aa14.2□□□□□ -0.14
COL5A1-208ENST00000618395 CD300LGQ6UXG3 332 aa14.2□□□□□ -0.14
COL5A1-208ENST00000618395 IL31RAQ8NI17 732 aa14.2□□□□□ -0.14
COL5A1-208ENST00000618395 TULP4Q9NRJ4 1543 aa14.2□□□□□ -0.14
COL5A1-208ENST00000618395 VSTM5A8MXK1 200 aa14.2□□□□□ -0.14
COL5A1-208ENST00000618395 C11orf98E9PRG8 122 aa14.2□□□□□ -0.14
COL5A1-208ENST00000618395 EGFP01133 1207 aa14.2□□□□□ -0.14
COL5A1-208ENST00000618395 SERPINA5P05154 406 aa14.2□□□□□ -0.14
COL5A1-208ENST00000618395 CTRB1P17538 263 aa14.2□□□□□ -0.14
COL5A1-208ENST00000618395 MRPL49Q13405 166 aaKnown RBP14.2□□□□□ -0.14
COL5A1-208ENST00000618395 CTRB2Q6GPI1 263 aa14.2□□□□□ -0.14
COL5A1-208ENST00000618395 ARV1Q9H2C2 271 aa14.2□□□□□ -0.14
COL5A1-208ENST00000618395 CHRDQ9H2X0 955 aa14.2□□□□□ -0.14
COL5A1-208ENST00000618395 C1orf198Q9H425 327 aa14.2□□□□□ -0.14
COL5A1-208ENST00000618395 DERAQ9Y315 318 aa14.2□□□□□ -0.14
COL5A1-208ENST00000618395 FAM221BA6H8Z2 402 aa14.2□□□□□ -0.14
COL5A1-208ENST00000618395 MMP3P08254 477 aa14.2□□□□□ -0.14
COL5A1-208ENST00000618395 SIM1P81133 766 aaPredicted RBP14.2□□□□□ -0.14
COL5A1-208ENST00000618395 BRAT1Q6PJG6 821 aa14.2□□□□□ -0.14
COL5A1-208ENST00000618395 SYT13Q7L8C5 426 aa14.2□□□□□ -0.14
COL5A1-208ENST00000618395 B3GNT8Q7Z7M8 397 aa14.2□□□□□ -0.14
COL5A1-208ENST00000618395 WRAP53Q9BUR4 548 aaKnown RBP14.2□□□□□ -0.14
COL5A1-208ENST00000618395 RAB9BQ9NP90 201 aa14.2□□□□□ -0.14
COL5A1-208ENST00000618395 RNF11Q9Y3C5 154 aa14.2□□□□□ -0.14
COL5A1-208ENST00000618395 ALKQ9UM73 1620 aa14.2□□□□□ -0.14
COL5A1-208ENST00000618395 SPATA31A3Q5VYP0 1347 aa14.2□□□□□ -0.14
COL5A1-208ENST00000618395 TP53I11O14683 189 aa14.2□□□□□ -0.14
COL5A1-208ENST00000618395 CELF2O95319 508 aaKnown RBP14.2□□□□□ -0.14
COL5A1-208ENST00000618395 FASLGP48023 281 aa14.2□□□□□ -0.14
COL5A1-208ENST00000618395 RPL24P83731 157 aaKnown RBP14.2□□□□□ -0.14
COL5A1-208ENST00000618395 MSMO1Q15800 293 aa14.2□□□□□ -0.14
COL5A1-208ENST00000618395 THOC6Q86W42 341 aaKnown RBP14.2□□□□□ -0.14
COL5A1-208ENST00000618395 FCRL5Q96RD9 977 aa14.2□□□□□ -0.14
COL5A1-208ENST00000618395 SLC12A9Q9BXP2 914 aa14.2□□□□□ -0.14
COL5A1-208ENST00000618395 DNAJC5Q9H3Z4 198 aa14.2□□□□□ -0.14
COL5A1-208ENST00000618395 POFUT1Q9H488 388 aa14.2□□□□□ -0.14
COL5A1-208ENST00000618395 KCNG2Q9UJ96 466 aa14.2□□□□□ -0.14
COL5A1-208ENST00000618395 SDHDO14521 159 aa14.2□□□□□ -0.14
COL5A1-208ENST00000618395 ERI3O43414 337 aaKnown RBP14.2□□□□□ -0.14
COL5A1-208ENST00000618395 TFAP2AP05549 437 aa14.2□□□□□ -0.14
COL5A1-208ENST00000618395 CHRNB4P30926 498 aa14.2□□□□□ -0.14
COL5A1-208ENST00000618395 LRIT3Q3SXY7 679 aa14.2□□□□□ -0.14
COL5A1-208ENST00000618395 MSS51Q4VC12 460 aa14.2□□□□□ -0.14
COL5A1-208ENST00000618395 AMZ2Q86W34 360 aa14.2□□□□□ -0.14
COL5A1-208ENST00000618395 CD84Q9UIB8 345 aa14.2□□□□□ -0.14
COL5A1-208ENST00000618395 HOXC11O43248 304 aaPredicted RBP14.19□□□□□ -0.14
COL5A1-208ENST00000618395 B4GALT4O60513 344 aa14.19□□□□□ -0.14
COL5A1-208ENST00000618395 GIPP09681 153 aaPredicted RBP14.19□□□□□ -0.14
COL5A1-208ENST00000618395 CD1EP15812 388 aa14.19□□□□□ -0.14
COL5A1-208ENST00000618395 SERPINA11Q86U17 422 aa14.19□□□□□ -0.14
COL5A1-208ENST00000618395 CLDN22Q8N7P3 220 aa14.19□□□□□ -0.14
COL5A1-208ENST00000618395 OR13F1Q8NGS4 319 aa14.19□□□□□ -0.14
COL5A1-208ENST00000618395 SRMSQ9H3Y6 488 aa14.19□□□□□ -0.14
COL5A1-208ENST00000618395 PPP1R14DQ9NXH3 145 aa14.19□□□□□ -0.14
COL5A1-208ENST00000618395 ALKBH4Q9NXW9 302 aa14.19□□□□□ -0.14
COL5A1-208ENST00000618395 NOCTQ9UK39 431 aaKnown RBP14.19□□□□□ -0.14
COL5A1-208ENST00000618395 C2orf72A6NCS6 295 aa14.19□□□□□ -0.14
COL5A1-208ENST00000618395 TMEM200CA6NKL6 621 aa14.19□□□□□ -0.14
COL5A1-208ENST00000618395 LGI1O95970 557 aa14.19□□□□□ -0.14
COL5A1-208ENST00000618395 PRR27Q6MZM9 219 aa14.19□□□□□ -0.14
COL5A1-208ENST00000618395 OR2T4Q8NH00 348 aa14.19□□□□□ -0.14
COL5A1-208ENST00000618395 ASAH2Q9NR71 780 aa14.19□□□□□ -0.14
COL5A1-208ENST00000618395 LAMA4Q16363 1823 aa14.19□□□□□ -0.14
COL5A1-208ENST00000618395 BTG3Q14201 252 aaPredicted RBP14.19□□□□□ -0.14
COL5A1-208ENST00000618395 HNF4GQ14541 408 aa14.19□□□□□ -0.14
COL5A1-208ENST00000618395 DEFB128Q7Z7B8 93 aa14.19□□□□□ -0.14
COL5A1-208ENST00000618395 GALNT9Q9HCQ5 603 aa14.19□□□□□ -0.14
COL5A1-208ENST00000618395 TMX2Q9Y320 296 aa14.19□□□□□ -0.14
COL5A1-208ENST00000618395 ADH5P11766 374 aa14.19□□□□□ -0.14
COL5A1-208ENST00000618395 IL1R2P27930 398 aa14.19□□□□□ -0.14
COL5A1-208ENST00000618395 CHRNEQ04844 493 aa14.19□□□□□ -0.14
COL5A1-208ENST00000618395 LTBQ06643 244 aa14.19□□□□□ -0.14
COL5A1-208ENST00000618395 PDGFRLQ15198 375 aa14.19□□□□□ -0.14
COL5A1-208ENST00000618395 ARSJQ5FYB0 599 aaPredicted RBP14.19□□□□□ -0.14
COL5A1-208ENST00000618395 ADGRF3Q8IZF5 1079 aa14.19□□□□□ -0.14
COL5A1-208ENST00000618395 SUMF1Q8NBK3 374 aa14.19□□□□□ -0.14
COL5A1-208ENST00000618395 PITX2Q99697 317 aa14.19□□□□□ -0.14
COL5A1-208ENST00000618395 G6PC3Q9BUM1 346 aa14.19□□□□□ -0.14
COL5A1-208ENST00000618395 WWTR1Q9GZV5 400 aa14.19□□□□□ -0.14
COL5A1-208ENST00000618395 ADAMTS13Q76LX8 1427 aa14.19□□□□□ -0.14
COL5A1-208ENST00000618395 A6NIN4 97 aa14.19□□□□□ -0.14
COL5A1-208ENST00000618395 PMS2P2O95744 297 aa14.19□□□□□ -0.14
COL5A1-208ENST00000618395 GJB1P08034 283 aa14.19□□□□□ -0.14
COL5A1-208ENST00000618395 SHMT1P34896 483 aa14.19□□□□□ -0.14
COL5A1-208ENST00000618395 OXA1LQ15070 435 aa14.19□□□□□ -0.14
COL5A1-208ENST00000618395 GPR33Q49SQ1 333 aa14.19□□□□□ -0.14
COL5A1-208ENST00000618395 TOMM20LQ6UXN7 152 aa14.19□□□□□ -0.14
COL5A1-208ENST00000618395 OR56B1Q8NGI3 324 aa14.19□□□□□ -0.14
COL5A1-208ENST00000618395 GRIN3BO60391 1043 aa14.19□□□□□ -0.14
COL5A1-208ENST00000618395 NRLP54845 237 aa14.19□□□□□ -0.14
COL5A1-208ENST00000618395 SLC9A3R2Q15599 337 aa14.19□□□□□ -0.14
COL5A1-208ENST00000618395 EHFQ9NZC4 300 aa14.19□□□□□ -0.14
COL5A1-208ENST00000618395 RFPL4AA6NLU0 287 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms