RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 ING5Q8WYH8 240 aa12.27□□□□□ -0.44
MSH6-214ENST00000616033 ZNF559Q9BR84 538 aa12.27□□□□□ -0.44
MSH6-214ENST00000616033 IFT27Q9BW83 186 aa12.27□□□□□ -0.44
MSH6-214ENST00000616033 GLIPR2Q9H4G4 154 aa12.27□□□□□ -0.44
MSH6-214ENST00000616033 WDR26Q9H7D7 661 aa12.27□□□□□ -0.44
MSH6-214ENST00000616033 RPS6KB2Q9UBS0 482 aa12.27□□□□□ -0.44
MSH6-214ENST00000616033 ATG2BQ96BY7 2078 aa12.27□□□□□ -0.44
MSH6-214ENST00000616033 LRRN3E7EW58 273 aa12.27□□□□□ -0.45
MSH6-214ENST00000616033 ATF1P18846 271 aa12.27□□□□□ -0.45
MSH6-214ENST00000616033 HK1P19367 917 aa12.27□□□□□ -0.45
MSH6-214ENST00000616033 CXCL2P19875 107 aa12.27□□□□□ -0.45
MSH6-214ENST00000616033 ACADLP28330 430 aa12.27□□□□□ -0.45
MSH6-214ENST00000616033 SCRN3Q0VDG4 424 aa12.27□□□□□ -0.45
MSH6-214ENST00000616033 ATXN7L3Q14CW9 347 aaPredicted RBP12.27□□□□□ -0.45
MSH6-214ENST00000616033 C17orf64Q86WR6 236 aa12.27□□□□□ -0.45
MSH6-214ENST00000616033 PCSK9Q8NBP7 692 aaKnown RBP12.27□□□□□ -0.45
MSH6-214ENST00000616033 GHSRQ92847 366 aa12.27□□□□□ -0.45
MSH6-214ENST00000616033 ZNF707Q96C28 371 aaPredicted RBP12.27□□□□□ -0.45
MSH6-214ENST00000616033 LRRN3Q9H3W5 708 aa12.27□□□□□ -0.45
MSH6-214ENST00000616033 SIRT3Q9NTG7 399 aaPredicted RBP12.27□□□□□ -0.45
MSH6-214ENST00000616033 ANXA2P2A6NMY6 339 aa12.27□□□□□ -0.45
MSH6-214ENST00000616033 ATP5A1P25705 553 aaKnown RBP12.27□□□□□ -0.45
MSH6-214ENST00000616033 PNLIPRP1P54315 467 aa12.27□□□□□ -0.45
MSH6-214ENST00000616033 PDE7AQ13946 482 aa12.27□□□□□ -0.45
MSH6-214ENST00000616033 KCNC3Q14003 757 aa12.27□□□□□ -0.45
MSH6-214ENST00000616033 SWI5Q1ZZU3 235 aa12.27□□□□□ -0.45
MSH6-214ENST00000616033 LRRC37A5PQ49AS3 106 aa12.27□□□□□ -0.45
MSH6-214ENST00000616033 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.27□□□□□ -0.45
MSH6-214ENST00000616033 PLA2G15Q8NCC3 412 aa12.27□□□□□ -0.45
MSH6-214ENST00000616033 ABHD4Q8TB40 342 aa12.27□□□□□ -0.45
MSH6-214ENST00000616033 LGALS14Q8TCE9 139 aa12.27□□□□□ -0.45
MSH6-214ENST00000616033 GNPDA2Q8TDQ7 276 aa12.27□□□□□ -0.45
MSH6-214ENST00000616033 OTUB2Q96DC9 234 aa12.27□□□□□ -0.45
MSH6-214ENST00000616033 CXorf40BQ96DE9 158 aa12.27□□□□□ -0.45
MSH6-214ENST00000616033 CHFRQ96EP1 664 aa12.27□□□□□ -0.45
MSH6-214ENST00000616033 PRRC1Q96M27 445 aa12.27□□□□□ -0.45
MSH6-214ENST00000616033 PDCD1LG2Q9BQ51 273 aa12.27□□□□□ -0.45
MSH6-214ENST00000616033 DPH7Q9BTV6 452 aa12.27□□□□□ -0.45
MSH6-214ENST00000616033 TRIM36Q9NQ86 728 aa12.27□□□□□ -0.45
MSH6-214ENST00000616033 CREBZFQ9NS37 354 aa12.27□□□□□ -0.45
MSH6-214ENST00000616033 IGLV3-16A0A075B6K0 115 aa12.26□□□□□ -0.45
MSH6-214ENST00000616033 A0A0G2JPF8 293 aa12.26□□□□□ -0.45
MSH6-214ENST00000616033 ARRDC5A6NEK1 342 aa12.26□□□□□ -0.45
MSH6-214ENST00000616033 OR5K4A6NMS3 321 aa12.26□□□□□ -0.45
MSH6-214ENST00000616033 HNRNPCL3B7ZW38 293 aa12.26□□□□□ -0.45
MSH6-214ENST00000616033 POP7O75817 140 aaKnown RBP12.26□□□□□ -0.45
MSH6-214ENST00000616033 LY86O95711 162 aa12.26□□□□□ -0.45
MSH6-214ENST00000616033 HNRNPCL4P0DMR1 293 aa12.26□□□□□ -0.45
MSH6-214ENST00000616033 TM4SF4P48230 202 aa12.26□□□□□ -0.45
MSH6-214ENST00000616033 POLR2LP62875 67 aaKnown RBP12.26□□□□□ -0.45
MSH6-214ENST00000616033 AGERQ15109 404 aa12.26□□□□□ -0.45
MSH6-214ENST00000616033 ENTPD8Q5MY95 495 aa12.26□□□□□ -0.45
MSH6-214ENST00000616033 PRPF38BQ5VTL8 546 aaKnown RBP12.26□□□□□ -0.45
MSH6-214ENST00000616033 ASTLQ6HA08 431 aaPredicted RBP12.26□□□□□ -0.45
MSH6-214ENST00000616033 RFLNBQ8N5W9 214 aa12.26□□□□□ -0.45
MSH6-214ENST00000616033 FBXO17Q96EF6 278 aa12.26□□□□□ -0.45
MSH6-214ENST00000616033 LRIG1Q96JA1 1093 aa12.26□□□□□ -0.45
MSH6-214ENST00000616033 OR1F2PQ96R84 312 aa12.26□□□□□ -0.45
MSH6-214ENST00000616033 FKRPQ9H9S5 495 aa12.26□□□□□ -0.45
MSH6-214ENST00000616033 SPG21Q9NZD8 308 aa12.26□□□□□ -0.45
MSH6-214ENST00000616033 PHF11Q9UIL8 331 aa12.26□□□□□ -0.45
MSH6-214ENST00000616033 CBLCQ9ULV8 474 aa12.26□□□□□ -0.45
MSH6-214ENST00000616033 SLC7A7Q9UM01 511 aa12.26□□□□□ -0.45
MSH6-214ENST00000616033 SLC22A23A1A5C7 686 aa12.26□□□□□ -0.45
MSH6-214ENST00000616033 FAM171A2A8MVW0 826 aa12.26□□□□□ -0.45
MSH6-214ENST00000616033 SURF4O15260 269 aa12.26□□□□□ -0.45
MSH6-214ENST00000616033 GSTM3P21266 225 aa12.26□□□□□ -0.45
MSH6-214ENST00000616033 IFNGR2P38484 337 aa12.26□□□□□ -0.45
MSH6-214ENST00000616033 DUSP6Q16828 381 aa12.26□□□□□ -0.45
MSH6-214ENST00000616033 ZCCHC12Q6PEW1 402 aa12.26□□□□□ -0.45
MSH6-214ENST00000616033 GPAT4Q86UL3 456 aa12.26□□□□□ -0.45
MSH6-214ENST00000616033 SAMD14Q8IZD0 417 aaPredicted RBP12.26□□□□□ -0.45
MSH6-214ENST00000616033 OR2T33Q8NG76 320 aa12.26□□□□□ -0.45
MSH6-214ENST00000616033 OR5J2Q8NH18 312 aa12.26□□□□□ -0.45
MSH6-214ENST00000616033 ADAMTS14Q8WXS8 1223 aa12.26□□□□□ -0.45
MSH6-214ENST00000616033 A4GALTQ9NPC4 353 aa12.26□□□□□ -0.45
MSH6-214ENST00000616033 TM7SF3Q9NS93 570 aa12.26□□□□□ -0.45
MSH6-214ENST00000616033 USP36Q9P275 1121 aaKnown RBP12.26□□□□□ -0.45
MSH6-214ENST00000616033 PCOLCE2Q9UKZ9 415 aa12.26□□□□□ -0.45
MSH6-214ENST00000616033 CCL26Q9Y258 94 aa12.26□□□□□ -0.45
MSH6-214ENST00000616033 KCNMB2Q9Y691 235 aa12.26□□□□□ -0.45
MSH6-214ENST00000616033 TRAV27A0A087WT01 109 aa12.25□□□□□ -0.45
MSH6-214ENST00000616033 MEIKINA0A087WXM9 373 aa12.25□□□□□ -0.45
MSH6-214ENST00000616033 C7orf66A4D0T2 115 aa12.25□□□□□ -0.45
MSH6-214ENST00000616033 LRRC72A6NJI9 287 aa12.25□□□□□ -0.45
MSH6-214ENST00000616033 RNF224P0DH78 156 aa12.25□□□□□ -0.45
MSH6-214ENST00000616033 BMP7P18075 431 aa12.25□□□□□ -0.45
MSH6-214ENST00000616033 RBMS1P29558 406 aaKnown RBP12.25□□□□□ -0.45
MSH6-214ENST00000616033 GPR1P46091 355 aa12.25□□□□□ -0.45
MSH6-214ENST00000616033 CCR8P51685 355 aa12.25□□□□□ -0.45
MSH6-214ENST00000616033 TGM3Q08188 693 aa12.25□□□□□ -0.45
MSH6-214ENST00000616033 TRAM2Q15035 370 aa12.25□□□□□ -0.45
MSH6-214ENST00000616033 PGGHGQ32M88 737 aa12.25□□□□□ -0.45
MSH6-214ENST00000616033 KHDRBS2Q5VWX1 349 aaKnown RBP12.25□□□□□ -0.45
MSH6-214ENST00000616033 KIAA1211LQ6NV74 962 aa12.25□□□□□ -0.45
MSH6-214ENST00000616033 ADGRG3Q86Y34 549 aa12.25□□□□□ -0.45
MSH6-214ENST00000616033 OR4N5Q8IXE1 308 aa12.25□□□□□ -0.45
MSH6-214ENST00000616033 CNOT9Q92600 299 aaKnown RBP12.25□□□□□ -0.45
MSH6-214ENST00000616033 PPP1R16AQ96I34 528 aa12.25□□□□□ -0.45
MSH6-214ENST00000616033 OR14A2Q96R54 314 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms