RNA–Protein interactions for RNA: ENST00000613099.4

VPS13D-213, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13D, Length 16,245 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-213ENST00000613099 SLC25A52Q3SY17 297 aa4.67□□□□□ -1.66
VPS13D-213ENST00000613099 C12orf40Q86WS4 652 aa4.67□□□□□ -1.66
VPS13D-213ENST00000613099 FAM58AQ8N1B3 248 aa4.67□□□□□ -1.66
VPS13D-213ENST00000613099 OR4F15Q8NGB8 312 aa4.67□□□□□ -1.66
VPS13D-213ENST00000613099 OR13D1Q8NGV5 346 aa4.67□□□□□ -1.66
VPS13D-213ENST00000613099 TOE1Q96GM8 510 aaKnown RBP4.67□□□□□ -1.66
VPS13D-213ENST00000613099 C3orf30Q96M34 536 aa4.67□□□□□ -1.66
VPS13D-213ENST00000613099 SNRNP25Q9BV90 132 aaKnown RBP4.67□□□□□ -1.66
VPS13D-213ENST00000613099 SEMA4GQ9NTN9 838 aa4.67□□□□□ -1.66
VPS13D-213ENST00000613099 ASB6Q9NWX5 421 aa4.67□□□□□ -1.66
VPS13D-213ENST00000613099 OR12D3Q9UGF7 316 aa4.67□□□□□ -1.66
VPS13D-213ENST00000613099 SLC6A14Q9UN76 642 aa4.67□□□□□ -1.66
VPS13D-213ENST00000613099 PCDHA9Q9Y5H5 950 aa4.67□□□□□ -1.66
VPS13D-213ENST00000613099 NHSQ6T4R5 1651 aa4.67□□□□□ -1.66
VPS13D-213ENST00000613099 TSPAN11A1L157 253 aa4.67□□□□□ -1.66
VPS13D-213ENST00000613099 BCL2L11O43521 198 aa4.67□□□□□ -1.66
VPS13D-213ENST00000613099 MTX2O75431 263 aa4.67□□□□□ -1.66
VPS13D-213ENST00000613099 OSMP13725 252 aa4.67□□□□□ -1.66
VPS13D-213ENST00000613099 DHCR24Q15392 516 aa4.67□□□□□ -1.66
VPS13D-213ENST00000613099 TAF1CQ15572 869 aaPredicted RBP4.67□□□□□ -1.66
VPS13D-213ENST00000613099 PHYHD1Q5SRE7 291 aa4.67□□□□□ -1.66
VPS13D-213ENST00000613099 C18orf63Q68DL7 685 aa4.67□□□□□ -1.66
VPS13D-213ENST00000613099 TTLL10Q6ZVT0 673 aa4.67□□□□□ -1.66
VPS13D-213ENST00000613099 BTLAQ7Z6A9 289 aa4.67□□□□□ -1.66
VPS13D-213ENST00000613099 MRPL10Q7Z7H8 261 aaKnown RBP4.67□□□□□ -1.66
VPS13D-213ENST00000613099 ZNF676Q8N7Q3 588 aa4.67□□□□□ -1.66
VPS13D-213ENST00000613099 STEAP2Q8NFT2 490 aa4.67□□□□□ -1.66
VPS13D-213ENST00000613099 ARNTL2Q8WYA1 636 aa4.67□□□□□ -1.66
VPS13D-213ENST00000613099 LENG9Q96B70 501 aa4.67□□□□□ -1.66
VPS13D-213ENST00000613099 CLSTN3Q9BQT9 956 aa4.67□□□□□ -1.66
VPS13D-213ENST00000613099 SLC25A31Q9H0C2 315 aa4.67□□□□□ -1.66
VPS13D-213ENST00000613099 GLTPD2A6NH11 291 aa4.67□□□□□ -1.66
VPS13D-213ENST00000613099 CD3GP09693 182 aa4.67□□□□□ -1.66
VPS13D-213ENST00000613099 CDC34P49427 236 aaPredicted RBP4.67□□□□□ -1.66
VPS13D-213ENST00000613099 SLC35A2P78381 396 aa4.67□□□□□ -1.66
VPS13D-213ENST00000613099 ODF4Q2M2E3 257 aa4.67□□□□□ -1.66
VPS13D-213ENST00000613099 FAM162BQ5T6X4 162 aa4.67□□□□□ -1.66
VPS13D-213ENST00000613099 TMPRSS11FQ6ZWK6 438 aa4.67□□□□□ -1.66
VPS13D-213ENST00000613099 EIF4E3Q8N5X7 224 aaKnown RBP4.67□□□□□ -1.66
VPS13D-213ENST00000613099 OR2T33Q8NG76 320 aa4.67□□□□□ -1.66
VPS13D-213ENST00000613099 NSUN4Q96CB9 384 aaKnown RBP4.67□□□□□ -1.66
VPS13D-213ENST00000613099 CELF6Q96J87 481 aaKnown RBP4.67□□□□□ -1.66
VPS13D-213ENST00000613099 LRIG1Q96JA1 1093 aa4.67□□□□□ -1.66
VPS13D-213ENST00000613099 GPR173Q9NS66 373 aa4.67□□□□□ -1.66
VPS13D-213ENST00000613099 MEIKINA0A087WXM9 373 aa4.67□□□□□ -1.66
VPS13D-213ENST00000613099 CLDN4O14493 209 aa4.67□□□□□ -1.66
VPS13D-213ENST00000613099 ZNF207O43670 478 aaKnown RBP4.67□□□□□ -1.66
VPS13D-213ENST00000613099 ERCC1P07992 297 aaPredicted RBP4.67□□□□□ -1.66
VPS13D-213ENST00000613099 KDELR2P33947 212 aa4.67□□□□□ -1.66
VPS13D-213ENST00000613099 SLC11A2P49281 568 aa4.67□□□□□ -1.66
VPS13D-213ENST00000613099 RPS14P62263 151 aaKnown RBP4.67□□□□□ -1.66
VPS13D-213ENST00000613099 SLAMF1Q13291 335 aa4.67□□□□□ -1.66
VPS13D-213ENST00000613099 ADIRFQ15847 76 aa4.67□□□□□ -1.66
VPS13D-213ENST00000613099 PDZD11Q5EBL8 140 aa4.67□□□□□ -1.66
VPS13D-213ENST00000613099 FAHD2BQ6P2I3 314 aaPredicted RBP4.67□□□□□ -1.66
VPS13D-213ENST00000613099 LARP4Q71RC2 724 aaKnown RBP eCLIP4.67□□□□□ -1.66
VPS13D-213ENST00000613099 HGDQ93099 445 aa4.67□□□□□ -1.66
VPS13D-213ENST00000613099 FAHD2AQ96GK7 314 aa4.67□□□□□ -1.66
VPS13D-213ENST00000613099 PCDHB1Q9Y5F3 818 aa4.67□□□□□ -1.66
VPS13D-213ENST00000613099 TNS2Q63HR2 1409 aa4.67□□□□□ -1.66
VPS13D-213ENST00000613099 A0A1B0GTW7 788 aa4.67□□□□□ -1.66
VPS13D-213ENST00000613099 TCRBV5S4A2TA0A5A2 114 aa4.67□□□□□ -1.66
VPS13D-213ENST00000613099 LRP5LA4QPB2 252 aa4.67□□□□□ -1.66
VPS13D-213ENST00000613099 ANHXE9PGG2 379 aa4.67□□□□□ -1.66
VPS13D-213ENST00000613099 NPIPA5E9PKD4 350 aa4.67□□□□□ -1.66
VPS13D-213ENST00000613099 NPIPA3F8WFD2 350 aa4.67□□□□□ -1.66
VPS13D-213ENST00000613099 GALTP07902 379 aa4.67□□□□□ -1.66
VPS13D-213ENST00000613099 MMP11P24347 488 aa4.67□□□□□ -1.66
VPS13D-213ENST00000613099 CD86P42081 329 aa4.67□□□□□ -1.66
VPS13D-213ENST00000613099 F2RL1P55085 397 aa4.67□□□□□ -1.66
VPS13D-213ENST00000613099 TBX4P57082 545 aa4.67□□□□□ -1.66
VPS13D-213ENST00000613099 MBTPS1Q14703 1052 aa4.67□□□□□ -1.66
VPS13D-213ENST00000613099 APOBEC3HQ6NTF7 200 aaKnown RBP4.67□□□□□ -1.66
VPS13D-213ENST00000613099 RHEBL1Q8TAI7 183 aa4.67□□□□□ -1.66
VPS13D-213ENST00000613099 ZNF514Q96K75 400 aaPredicted RBP4.67□□□□□ -1.66
VPS13D-213ENST00000613099 SLC35B3Q9H1N7 401 aa4.67□□□□□ -1.66
VPS13D-213ENST00000613099 RHOFQ9HBH0 211 aa4.67□□□□□ -1.66
VPS13D-213ENST00000613099 NPIPA1Q9UND3 350 aa4.67□□□□□ -1.66
VPS13D-213ENST00000613099 ECI2O75521 394 aa4.67□□□□□ -1.66
VPS13D-213ENST00000613099 RPP40O75818 363 aaKnown RBP4.67□□□□□ -1.66
VPS13D-213ENST00000613099 CCNOP22674 350 aa4.67□□□□□ -1.66
VPS13D-213ENST00000613099 CSF2RBP32927 897 aa4.67□□□□□ -1.66
VPS13D-213ENST00000613099 OR4K17Q8NGC6 315 aa4.67□□□□□ -1.66
VPS13D-213ENST00000613099 MUC3BQ9H195 1237 aa4.67□□□□□ -1.66
VPS13D-213ENST00000613099 ACTL8Q9H568 366 aa4.67□□□□□ -1.66
VPS13D-213ENST00000613099 NENFQ9UMX5 172 aa4.67□□□□□ -1.66
VPS13D-213ENST00000613099 MOXD2PA6NHM9 499 aa4.67□□□□□ -1.66
VPS13D-213ENST00000613099 MANBAO00462 879 aa4.67□□□□□ -1.66
VPS13D-213ENST00000613099 IL1RNP18510 177 aa4.67□□□□□ -1.66
VPS13D-213ENST00000613099 ABCD3P28288 659 aa4.67□□□□□ -1.66
VPS13D-213ENST00000613099 NMBRP28336 390 aa4.67□□□□□ -1.66
VPS13D-213ENST00000613099 TPPP2P59282 170 aa4.67□□□□□ -1.66
VPS13D-213ENST00000613099 GRM7Q14831 915 aa4.67□□□□□ -1.66
VPS13D-213ENST00000613099 SV2CQ496J9 727 aa4.67□□□□□ -1.66
VPS13D-213ENST00000613099 PDZD3Q86UT5 571 aa4.67□□□□□ -1.66
VPS13D-213ENST00000613099 ARRDC4Q8NCT1 418 aa4.67□□□□□ -1.66
VPS13D-213ENST00000613099 HHIPL1Q96JK4 782 aa4.67□□□□□ -1.66
VPS13D-213ENST00000613099 WDFY2Q96P53 400 aa4.67□□□□□ -1.66
VPS13D-213ENST00000613099 TGM7Q96PF1 710 aa4.67□□□□□ -1.66
VPS13D-213ENST00000613099 ZNF385DQ9H6B1 395 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms