RNA–Protein interactions for RNA: ENST00000608461.1

HDDC2-206, Transcript of HD domain containing 2, humanhuman

TSL 2

Gene HDDC2, Length 587 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-206ENST00000608461 HNRNPCL2B2RXH8 293 aa12.89□□□□□ -0.35
HDDC2-206ENST00000608461 HNRNPCL3B7ZW38 293 aa12.89□□□□□ -0.35
HDDC2-206ENST00000608461 PRSS44E7EML9 344 aa12.89□□□□□ -0.35
HDDC2-206ENST00000608461 NPIPA7E9PJI5 369 aa12.89□□□□□ -0.35
HDDC2-206ENST00000608461 SLC22A2O15244 555 aa12.89□□□□□ -0.35
HDDC2-206ENST00000608461 HNRNPCL1O60812 293 aaKnown RBP12.89□□□□□ -0.35
HDDC2-206ENST00000608461 NUDT14O95848 222 aa12.89□□□□□ -0.35
HDDC2-206ENST00000608461 IL18BPO95998 194 aa12.89□□□□□ -0.35
HDDC2-206ENST00000608461 DBIP07108 87 aaKnown RBP12.89□□□□□ -0.35
HDDC2-206ENST00000608461 SNRPB2P08579 225 aaKnown RBP12.89□□□□□ -0.35
HDDC2-206ENST00000608461 NPIPA8P0DM63 369 aa12.89□□□□□ -0.35
HDDC2-206ENST00000608461 HNRNPCL4P0DMR1 293 aa12.89□□□□□ -0.35
HDDC2-206ENST00000608461 GPX2P18283 190 aa12.89□□□□□ -0.35
HDDC2-206ENST00000608461 PGCP20142 388 aa12.89□□□□□ -0.35
HDDC2-206ENST00000608461 RPS4Y1P22090 263 aaKnown RBP12.89□□□□□ -0.35
HDDC2-206ENST00000608461 PSMA4P25789 261 aaKnown RBP12.89□□□□□ -0.35
HDDC2-206ENST00000608461 PGM1P36871 562 aa12.89□□□□□ -0.35
HDDC2-206ENST00000608461 STARP49675 285 aa12.89□□□□□ -0.35
HDDC2-206ENST00000608461 CHRNEQ04844 493 aa12.89□□□□□ -0.35
HDDC2-206ENST00000608461 SRYQ05066 204 aa12.89□□□□□ -0.35
HDDC2-206ENST00000608461 SKP2Q13309 424 aa12.89□□□□□ -0.35
HDDC2-206ENST00000608461 SLC25A53Q5H9E4 307 aa12.89□□□□□ -0.35
HDDC2-206ENST00000608461 COQ5Q5HYK3 327 aa12.89□□□□□ -0.35
HDDC2-206ENST00000608461 PAGE3Q5JUK9 113 aa12.89□□□□□ -0.35
HDDC2-206ENST00000608461 OR2A2Q6IF42 318 aa12.89□□□□□ -0.35
HDDC2-206ENST00000608461 SEM1Q6ZVN7 128 aa12.89□□□□□ -0.35
HDDC2-206ENST00000608461 NCCRP1Q6ZVX7 275 aaPredicted RBP12.89□□□□□ -0.35
HDDC2-206ENST00000608461 PEX5LQ8IYB4 626 aa12.89□□□□□ -0.35
HDDC2-206ENST00000608461 PNPT1Q8TCS8 783 aaKnown RBP12.89□□□□□ -0.35
HDDC2-206ENST00000608461 TMEM234Q8WY98 164 aa12.89□□□□□ -0.35
HDDC2-206ENST00000608461 ST8SIA1Q92185 356 aa12.89□□□□□ -0.35
HDDC2-206ENST00000608461 TRIB1Q96RU8 372 aa12.89□□□□□ -0.35
HDDC2-206ENST00000608461 TUBA1CQ9BQE3 449 aa12.89□□□□□ -0.35
HDDC2-206ENST00000608461 RUBCNLQ9H714 662 aa12.89□□□□□ -0.35
HDDC2-206ENST00000608461 Q9UFV3 132 aa12.89□□□□□ -0.35
HDDC2-206ENST00000608461 DSPPQ9NZW4 1301 aa12.88□□□□□ -0.35
HDDC2-206ENST00000608461 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.88□□□□□ -0.35
HDDC2-206ENST00000608461 GJE1A6NN92 205 aa12.88□□□□□ -0.35
HDDC2-206ENST00000608461 CLCA1A8K7I4 914 aa12.88□□□□□ -0.35
HDDC2-206ENST00000608461 H3BML4 177 aa12.88□□□□□ -0.35
HDDC2-206ENST00000608461 DVL2O14641 736 aa12.88□□□□□ -0.35
HDDC2-206ENST00000608461 TOXO94900 526 aa12.88□□□□□ -0.35
HDDC2-206ENST00000608461 RCBTB2O95199 551 aa12.88□□□□□ -0.35
HDDC2-206ENST00000608461 NPPAP01160 153 aa12.88□□□□□ -0.35
HDDC2-206ENST00000608461 CRHP06850 196 aa12.88□□□□□ -0.35
HDDC2-206ENST00000608461 CHRM4P08173 479 aa12.88□□□□□ -0.35
HDDC2-206ENST00000608461 ETFAP13804 333 aa12.88□□□□□ -0.35
HDDC2-206ENST00000608461 NID1P14543 1247 aa12.88□□□□□ -0.35
HDDC2-206ENST00000608461 IL7RP16871 459 aa12.88□□□□□ -0.35
HDDC2-206ENST00000608461 FKBP2P26885 142 aaKnown RBP12.88□□□□□ -0.35
HDDC2-206ENST00000608461 OPRM1P35372 400 aa12.88□□□□□ -0.35
HDDC2-206ENST00000608461 SLC6A8P48029 635 aa12.88□□□□□ -0.35
HDDC2-206ENST00000608461 DLX5P56178 289 aa12.88□□□□□ -0.35
HDDC2-206ENST00000608461 MAPRE2Q15555 327 aa12.88□□□□□ -0.35
HDDC2-206ENST00000608461 MAPK14Q16539 360 aa12.88□□□□□ -0.35
HDDC2-206ENST00000608461 GTDC1Q4AE62 458 aa12.88□□□□□ -0.35
HDDC2-206ENST00000608461 PDSS1Q5T2R2 415 aa12.88□□□□□ -0.35
HDDC2-206ENST00000608461 SP5Q6BEB4 398 aaPredicted RBP12.88□□□□□ -0.35
HDDC2-206ENST00000608461 CGB2Q6NT52 195 aa12.88□□□□□ -0.35
HDDC2-206ENST00000608461 DLEU7Q6UYE1 221 aa12.88□□□□□ -0.35
HDDC2-206ENST00000608461 ESPNLQ6ZVH7 1005 aa12.88□□□□□ -0.35
HDDC2-206ENST00000608461 ANKFN1Q8N957 763 aa12.88□□□□□ -0.35
HDDC2-206ENST00000608461 SLC38A5Q8WUX1 472 aa12.88□□□□□ -0.35
HDDC2-206ENST00000608461 ZG16BQ96DA0 208 aa12.88□□□□□ -0.35
HDDC2-206ENST00000608461 LRRC46Q96FV0 321 aa12.88□□□□□ -0.35
HDDC2-206ENST00000608461 AURKBQ96GD4 344 aaPredicted RBP12.88□□□□□ -0.35
HDDC2-206ENST00000608461 ARMC7Q9H6L4 198 aa12.88□□□□□ -0.35
HDDC2-206ENST00000608461 CACYBPQ9HB71 228 aaKnown RBP12.88□□□□□ -0.35
HDDC2-206ENST00000608461 SLC24A3Q9HC58 644 aa12.88□□□□□ -0.35
HDDC2-206ENST00000608461 BCL2L10Q9HD36 194 aa12.88□□□□□ -0.35
HDDC2-206ENST00000608461 A4GALTQ9NPC4 353 aa12.88□□□□□ -0.35
HDDC2-206ENST00000608461 SLC25A37Q9NYZ2 338 aa12.88□□□□□ -0.35
HDDC2-206ENST00000608461 VAPAQ9P0L0 249 aa12.88□□□□□ -0.35
HDDC2-206ENST00000608461 CLCF1Q9UBD9 225 aa12.88□□□□□ -0.35
HDDC2-206ENST00000608461 ZNF232Q9UNY5 417 aa12.88□□□□□ -0.35
HDDC2-206ENST00000608461 ZNF175Q9Y473 711 aa12.88□□□□□ -0.35
HDDC2-206ENST00000608461 BBIP1A8MTZ0 92 aa12.87□□□□□ -0.35
HDDC2-206ENST00000608461 FAAHO00519 579 aa12.87□□□□□ -0.35
HDDC2-206ENST00000608461 ADAMDEC1O15204 470 aa12.87□□□□□ -0.35
HDDC2-206ENST00000608461 GMFGO60234 142 aa12.87□□□□□ -0.35
HDDC2-206ENST00000608461 NTN1O95631 604 aa12.87□□□□□ -0.35
HDDC2-206ENST00000608461 C1QCP02747 245 aa12.87□□□□□ -0.35
HDDC2-206ENST00000608461 THBS1P07996 1170 aa12.87□□□□□ -0.35
HDDC2-206ENST00000608461 FCGR2AP12318 317 aa12.87□□□□□ -0.35
HDDC2-206ENST00000608461 UQCRBP14927 111 aa12.87□□□□□ -0.35
HDDC2-206ENST00000608461 PRKCAP17252 672 aa12.87□□□□□ -0.35
HDDC2-206ENST00000608461 CTSSP25774 331 aa12.87□□□□□ -0.35
HDDC2-206ENST00000608461 PEX19P40855 299 aa12.87□□□□□ -0.35
HDDC2-206ENST00000608461 GRAMD2AQ8IUY3 354 aa12.87□□□□□ -0.35
HDDC2-206ENST00000608461 CCDC71Q8IV32 467 aaPredicted RBP12.87□□□□□ -0.35
HDDC2-206ENST00000608461 MSRB3Q8IXL7 192 aa12.87□□□□□ -0.35
HDDC2-206ENST00000608461 ZNF440Q8IYI8 595 aa12.87□□□□□ -0.35
HDDC2-206ENST00000608461 TMCO5AQ8N6Q1 288 aa12.87□□□□□ -0.35
HDDC2-206ENST00000608461 TNIP2Q8NFZ5 429 aa12.87□□□□□ -0.35
HDDC2-206ENST00000608461 WDR60Q8WVS4 1066 aa12.87□□□□□ -0.35
HDDC2-206ENST00000608461 RNF145Q96MT1 663 aa12.87□□□□□ -0.35
HDDC2-206ENST00000608461 TREX2Q9BQ50 279 aaPredicted RBP12.87□□□□□ -0.35
HDDC2-206ENST00000608461 TMEM38AQ9H6F2 299 aa12.87□□□□□ -0.35
HDDC2-206ENST00000608461 SLAMF8Q9P0V8 285 aa12.87□□□□□ -0.35
HDDC2-206ENST00000608461 IFT52Q9Y366 437 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms