RNA–Protein interactions for RNA: ENST00000605847.5

NEDD8-MDP1-204, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 758 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-204ENST00000605847 NAB1Q13506 487 aa13.52□□□□□ -0.25
NEDD8-MDP1-204ENST00000605847 MLC1Q15049 377 aa13.52□□□□□ -0.25
NEDD8-MDP1-204ENST00000605847 TECRLQ5HYJ1 363 aa13.52□□□□□ -0.25
NEDD8-MDP1-204ENST00000605847 RINLQ6ZS11 566 aa13.52□□□□□ -0.25
NEDD8-MDP1-204ENST00000605847 RPS27LQ71UM5 84 aaKnown RBP13.52□□□□□ -0.25
NEDD8-MDP1-204ENST00000605847 VRK1Q99986 396 aaPredicted RBP13.52□□□□□ -0.25
NEDD8-MDP1-204ENST00000605847 SOX7Q9BT81 388 aa13.52□□□□□ -0.25
NEDD8-MDP1-204ENST00000605847 C1QTNF6Q9BXI9 259 aa13.52□□□□□ -0.25
NEDD8-MDP1-204ENST00000605847 NTMQ9P121 344 aa13.52□□□□□ -0.25
NEDD8-MDP1-204ENST00000605847 RNF14Q9UBS8 474 aa13.52□□□□□ -0.25
NEDD8-MDP1-204ENST00000605847 GRID1Q9ULK0 1009 aa13.52□□□□□ -0.25
NEDD8-MDP1-204ENST00000605847 SLC25A15Q9Y619 301 aa13.52□□□□□ -0.25
NEDD8-MDP1-204ENST00000605847 DYSFO75923 2080 aa13.51□□□□□ -0.25
NEDD8-MDP1-204ENST00000605847 NPIPA5A0A0B4J1W7 369 aa13.51□□□□□ -0.25
NEDD8-MDP1-204ENST00000605847 LRP5LA4QPB2 252 aa13.51□□□□□ -0.25
NEDD8-MDP1-204ENST00000605847 NPIPA7E9PJI5 369 aa13.51□□□□□ -0.25
NEDD8-MDP1-204ENST00000605847 OR4F21O95013 312 aa13.51□□□□□ -0.25
NEDD8-MDP1-204ENST00000605847 ANXA4P09525 319 aaPredicted RBP13.51□□□□□ -0.25
NEDD8-MDP1-204ENST00000605847 NPIPA8P0DM63 369 aa13.51□□□□□ -0.25
NEDD8-MDP1-204ENST00000605847 TSPAN8P19075 237 aa13.51□□□□□ -0.25
NEDD8-MDP1-204ENST00000605847 TIA1P31483 386 aaKnown RBP eCLIP13.51□□□□□ -0.25
NEDD8-MDP1-204ENST00000605847 GSTM5P46439 218 aa13.51□□□□□ -0.25
NEDD8-MDP1-204ENST00000605847 PRIM2P49643 509 aa13.51□□□□□ -0.25
NEDD8-MDP1-204ENST00000605847 CHN2P52757 468 aa13.51□□□□□ -0.25
NEDD8-MDP1-204ENST00000605847 RAC3P60763 192 aa13.51□□□□□ -0.25
NEDD8-MDP1-204ENST00000605847 RAE1P78406 368 aaKnown RBP13.51□□□□□ -0.25
NEDD8-MDP1-204ENST00000605847 C2orf80Q0P641 193 aa13.51□□□□□ -0.25
NEDD8-MDP1-204ENST00000605847 FBXW9Q5XUX1 488 aa13.51□□□□□ -0.25
NEDD8-MDP1-204ENST00000605847 SLC46A3Q7Z3Q1 461 aa13.51□□□□□ -0.25
NEDD8-MDP1-204ENST00000605847 LINC01356Q8N9X3 169 aa13.51□□□□□ -0.25
NEDD8-MDP1-204ENST00000605847 TOR1AIP2Q8NFQ8 470 aa13.51□□□□□ -0.25
NEDD8-MDP1-204ENST00000605847 FBXO27Q8NI29 283 aa13.51□□□□□ -0.25
NEDD8-MDP1-204ENST00000605847 FBF1Q8TES7 1133 aa13.51□□□□□ -0.25
NEDD8-MDP1-204ENST00000605847 MRRFQ96E11 262 aaKnown RBP13.51□□□□□ -0.25
NEDD8-MDP1-204ENST00000605847 ELP4Q96EB1 424 aa13.51□□□□□ -0.25
NEDD8-MDP1-204ENST00000605847 GPR78Q96P69 363 aa13.51□□□□□ -0.25
NEDD8-MDP1-204ENST00000605847 ZNF300Q96RE9 604 aaPredicted RBP13.51□□□□□ -0.25
NEDD8-MDP1-204ENST00000605847 EBPLQ9BY08 206 aa13.51□□□□□ -0.25
NEDD8-MDP1-204ENST00000605847 VPS11Q9H270 941 aa13.51□□□□□ -0.25
NEDD8-MDP1-204ENST00000605847 GLIPR2Q9H4G4 154 aa13.51□□□□□ -0.25
NEDD8-MDP1-204ENST00000605847 METTL17Q9H7H0 456 aaPredicted RBP13.51□□□□□ -0.25
NEDD8-MDP1-204ENST00000605847 COQ10BQ9H8M1 238 aa13.51□□□□□ -0.25
NEDD8-MDP1-204ENST00000605847 UBQLN4Q9NRR5 601 aa13.51□□□□□ -0.25
NEDD8-MDP1-204ENST00000605847 TRAF6Q9Y4K3 522 aa13.51□□□□□ -0.25
NEDD8-MDP1-204ENST00000605847 CADP27708 2225 aa13.5□□□□□ -0.25
NEDD8-MDP1-204ENST00000605847 ZNF724A8MTY0 619 aa13.5□□□□□ -0.25
NEDD8-MDP1-204ENST00000605847 MANBAO00462 879 aa13.5□□□□□ -0.25
NEDD8-MDP1-204ENST00000605847 PPP6CO00743 305 aa13.5□□□□□ -0.25
NEDD8-MDP1-204ENST00000605847 ULK1O75385 1050 aa13.5□□□□□ -0.25
NEDD8-MDP1-204ENST00000605847 SNUPNO95149 360 aaKnown RBP13.5□□□□□ -0.25
NEDD8-MDP1-204ENST00000605847 IGHV3-9P01782 118 aa13.5□□□□□ -0.25
NEDD8-MDP1-204ENST00000605847 EDNRAP25101 427 aa13.5□□□□□ -0.25
NEDD8-MDP1-204ENST00000605847 CDH13P55290 713 aa13.5□□□□□ -0.25
NEDD8-MDP1-204ENST00000605847 OR7E24Q6IFN5 339 aa13.5□□□□□ -0.25
NEDD8-MDP1-204ENST00000605847 SEMA6DQ8NFY4 1073 aa13.5□□□□□ -0.25
NEDD8-MDP1-204ENST00000605847 ZNF418Q8TF45 676 aaPredicted RBP13.5□□□□□ -0.25
NEDD8-MDP1-204ENST00000605847 EMC3Q9P0I2 261 aa13.5□□□□□ -0.25
NEDD8-MDP1-204ENST00000605847 ING1Q9UK53 422 aaPredicted RBP13.5□□□□□ -0.25
NEDD8-MDP1-204ENST00000605847 GPC6Q9Y625 555 aaPredicted RBP13.5□□□□□ -0.25
NEDD8-MDP1-204ENST00000605847 A0A1W2PNR3 127 aa13.49□□□□□ -0.25
NEDD8-MDP1-204ENST00000605847 TMEM89A2RUT3 159 aa13.49□□□□□ -0.25
NEDD8-MDP1-204ENST00000605847 FAM157AC9JC47 383 aa13.49□□□□□ -0.25
NEDD8-MDP1-204ENST00000605847 EFNA2O43921 213 aa13.49□□□□□ -0.25
NEDD8-MDP1-204ENST00000605847 CYTIPO60759 359 aa13.49□□□□□ -0.25
NEDD8-MDP1-204ENST00000605847 PRPS2P11908 318 aa13.49□□□□□ -0.25
NEDD8-MDP1-204ENST00000605847 CHN1P15882 459 aa13.49□□□□□ -0.25
NEDD8-MDP1-204ENST00000605847 TCP1P17987 556 aaKnown RBP13.49□□□□□ -0.25
NEDD8-MDP1-204ENST00000605847 APEX1P27695 318 aaKnown RBP13.49□□□□□ -0.25
NEDD8-MDP1-204ENST00000605847 HMOX2P30519 316 aa13.49□□□□□ -0.25
NEDD8-MDP1-204ENST00000605847 SERPINB8P50452 374 aa13.49□□□□□ -0.25
NEDD8-MDP1-204ENST00000605847 BTKQ06187 659 aa13.49□□□□□ -0.25
NEDD8-MDP1-204ENST00000605847 UAP1Q16222 522 aaPredicted RBP13.49□□□□□ -0.25
NEDD8-MDP1-204ENST00000605847 SWI5Q1ZZU3 235 aa13.49□□□□□ -0.25
NEDD8-MDP1-204ENST00000605847 UGT2A3Q6UWM9 527 aa13.49□□□□□ -0.25
NEDD8-MDP1-204ENST00000605847 SZRD1Q7Z422 152 aa13.49□□□□□ -0.25
NEDD8-MDP1-204ENST00000605847 LRRC8AQ8IWT6 810 aa13.49□□□□□ -0.25
NEDD8-MDP1-204ENST00000605847 ANKS4BQ8N8V4 417 aa13.49□□□□□ -0.25
NEDD8-MDP1-204ENST00000605847 OR6Y1Q8NGX8 325 aa13.49□□□□□ -0.25
NEDD8-MDP1-204ENST00000605847 PHOSPHO1Q8TCT1 267 aa13.49□□□□□ -0.25
NEDD8-MDP1-204ENST00000605847 HPS1Q92902 700 aa13.49□□□□□ -0.25
NEDD8-MDP1-204ENST00000605847 APIPQ96GX9 242 aa13.49□□□□□ -0.25
NEDD8-MDP1-204ENST00000605847 AMDHD1Q96NU7 426 aa13.49□□□□□ -0.25
NEDD8-MDP1-204ENST00000605847 KLHDC3Q9BQ90 382 aa13.49□□□□□ -0.25
NEDD8-MDP1-204ENST00000605847 ASB6Q9NWX5 421 aa13.49□□□□□ -0.25
NEDD8-MDP1-204ENST00000605847 TAS2R16Q9NYV7 291 aa13.49□□□□□ -0.25
NEDD8-MDP1-204ENST00000605847 A0A1W2PQD3 144 aa13.48□□□□□ -0.25
NEDD8-MDP1-204ENST00000605847 TRIM77I1YAP6 450 aa13.48□□□□□ -0.25
NEDD8-MDP1-204ENST00000605847 NKX2-2O95096 273 aa13.48□□□□□ -0.25
NEDD8-MDP1-204ENST00000605847 RPS17P08708 135 aaKnown RBP13.48□□□□□ -0.25
NEDD8-MDP1-204ENST00000605847 LCN1P31025 176 aa13.48□□□□□ -0.25
NEDD8-MDP1-204ENST00000605847 GPC1P35052 558 aa13.48□□□□□ -0.25
NEDD8-MDP1-204ENST00000605847 PRKAG1P54619 331 aa13.48□□□□□ -0.25
NEDD8-MDP1-204ENST00000605847 DEFA6Q01524 100 aa13.48□□□□□ -0.25
NEDD8-MDP1-204ENST00000605847 ZNF117Q03924 483 aa13.48□□□□□ -0.25
NEDD8-MDP1-204ENST00000605847 ZNF763Q0D2J5 394 aa13.48□□□□□ -0.25
NEDD8-MDP1-204ENST00000605847 SELENBP1Q13228 472 aa13.48□□□□□ -0.25
NEDD8-MDP1-204ENST00000605847 RASA2Q15283 850 aa13.48□□□□□ -0.25
NEDD8-MDP1-204ENST00000605847 CD226Q15762 336 aa13.48□□□□□ -0.25
NEDD8-MDP1-204ENST00000605847 FAM219BQ5XKK7 198 aa13.48□□□□□ -0.25
NEDD8-MDP1-204ENST00000605847 CDRT4Q8N9R6 151 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms