RNA–Protein interactions for RNA: ENST00000600077.5

HOMER3-212, Transcript of homer scaffold protein 3, humanhuman

TSL 3

Gene HOMER3, Length 675 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-212ENST00000600077 SHISA9B4DS77 424 aa12.17□□□□□ -0.46
HOMER3-212ENST00000600077 NPIPB8E9PQR5 432 aa12.17□□□□□ -0.46
HOMER3-212ENST00000600077 RAMP1O60894 148 aa12.17□□□□□ -0.46
HOMER3-212ENST00000600077 REM1O75628 298 aa12.17□□□□□ -0.46
HOMER3-212ENST00000600077 CHRNGP07510 517 aa12.17□□□□□ -0.46
HOMER3-212ENST00000600077 LINC00032P0C843 101 aa12.17□□□□□ -0.46
HOMER3-212ENST00000600077 H2AFXP16104 143 aaPredicted RBP12.17□□□□□ -0.46
HOMER3-212ENST00000600077 PTNP21246 168 aa12.17□□□□□ -0.46
HOMER3-212ENST00000600077 GRK2P25098 689 aa12.17□□□□□ -0.46
HOMER3-212ENST00000600077 SERPINB5P36952 375 aa12.17□□□□□ -0.46
HOMER3-212ENST00000600077 NR4A2P43354 598 aa12.17□□□□□ -0.46
HOMER3-212ENST00000600077 PDLIM4P50479 330 aa12.17□□□□□ -0.46
HOMER3-212ENST00000600077 CORO7P57737 925 aa12.17□□□□□ -0.46
HOMER3-212ENST00000600077 MRPS22P82650 360 aaKnown RBP12.17□□□□□ -0.46
HOMER3-212ENST00000600077 EFR3AQ14156 821 aa12.17□□□□□ -0.46
HOMER3-212ENST00000600077 GANABQ14697 944 aaKnown RBP12.17□□□□□ -0.46
HOMER3-212ENST00000600077 CASP8Q14790 479 aa12.17□□□□□ -0.46
HOMER3-212ENST00000600077 ARL13AQ5H913 290 aaPredicted RBP12.17□□□□□ -0.46
HOMER3-212ENST00000600077 SH2D4BQ5SQS7 431 aa12.17□□□□□ -0.46
HOMER3-212ENST00000600077 SFRP5Q5T4F7 317 aa12.17□□□□□ -0.46
HOMER3-212ENST00000600077 OR5M10Q6IEU7 315 aa12.17□□□□□ -0.46
HOMER3-212ENST00000600077 TMEM107Q6UX40 140 aa12.17□□□□□ -0.46
HOMER3-212ENST00000600077 FBXL14Q8N1E6 418 aa12.17□□□□□ -0.46
HOMER3-212ENST00000600077 MUC15Q8N387 334 aa12.17□□□□□ -0.46
HOMER3-212ENST00000600077 OR7G2Q8NG99 324 aa12.17□□□□□ -0.46
HOMER3-212ENST00000600077 ZFP28Q8NHY6 868 aa12.17□□□□□ -0.46
HOMER3-212ENST00000600077 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.17□□□□□ -0.46
HOMER3-212ENST00000600077 AGR3Q8TD06 166 aa12.17□□□□□ -0.46
HOMER3-212ENST00000600077 TWIST2Q8WVJ9 160 aa12.17□□□□□ -0.46
HOMER3-212ENST00000600077 PPCDCQ96CD2 204 aa12.17□□□□□ -0.46
HOMER3-212ENST00000600077 VSTM2LQ96N03 204 aa12.17□□□□□ -0.46
HOMER3-212ENST00000600077 COL21A1Q96P44 957 aa12.17□□□□□ -0.46
HOMER3-212ENST00000600077 POTEKPQ9BYX7 375 aa12.17□□□□□ -0.46
HOMER3-212ENST00000600077 FBXO34Q9NWN3 711 aa12.17□□□□□ -0.46
HOMER3-212ENST00000600077 PAQR5Q9NXK6 330 aaPredicted RBP12.17□□□□□ -0.46
HOMER3-212ENST00000600077 TAS2R7Q9NYW3 318 aa12.17□□□□□ -0.46
HOMER3-212ENST00000600077 ARMCX1Q9P291 453 aa12.17□□□□□ -0.46
HOMER3-212ENST00000600077 TMED5Q9Y3A6 229 aa12.17□□□□□ -0.46
HOMER3-212ENST00000600077 CCL27Q9Y4X3 112 aa12.17□□□□□ -0.46
HOMER3-212ENST00000600077 DNAJC15Q9Y5T4 150 aa12.17□□□□□ -0.46
HOMER3-212ENST00000600077 AP4B1Q9Y6B7 739 aa12.17□□□□□ -0.46
HOMER3-212ENST00000600077 CADP27708 2225 aa12.17□□□□□ -0.46
HOMER3-212ENST00000600077 A0A087WV62 115 aa12.16□□□□□ -0.46
HOMER3-212ENST00000600077 TMEM233B4DJY2 109 aa12.16□□□□□ -0.46
HOMER3-212ENST00000600077 H3BML4 177 aa12.16□□□□□ -0.46
HOMER3-212ENST00000600077 TRIM77I1YAP6 450 aa12.16□□□□□ -0.46
HOMER3-212ENST00000600077 TMPRSS2O15393 492 aa12.16□□□□□ -0.46
HOMER3-212ENST00000600077 PDPK1O15530 556 aa12.16□□□□□ -0.46
HOMER3-212ENST00000600077 DDX5P17844 614 aaKnown RBP12.16□□□□□ -0.46
HOMER3-212ENST00000600077 HK1P19367 917 aa12.16□□□□□ -0.46
HOMER3-212ENST00000600077 PCMT1P22061 227 aa12.16□□□□□ -0.46
HOMER3-212ENST00000600077 MAPK1P28482 360 aa12.16□□□□□ -0.46
HOMER3-212ENST00000600077 GPC1P35052 558 aa12.16□□□□□ -0.46
HOMER3-212ENST00000600077 CLDN20P56880 219 aa12.16□□□□□ -0.46
HOMER3-212ENST00000600077 ZNHIT3Q15649 155 aaPredicted RBP12.16□□□□□ -0.46
HOMER3-212ENST00000600077 GALNTL6Q49A17 601 aa12.16□□□□□ -0.46
HOMER3-212ENST00000600077 GTF2IRD2BQ6EKJ0 949 aa12.16□□□□□ -0.46
HOMER3-212ENST00000600077 PPP4R4Q6NUP7 873 aa12.16□□□□□ -0.46
HOMER3-212ENST00000600077 SHISA2Q6UWI4 295 aa12.16□□□□□ -0.46
HOMER3-212ENST00000600077 ZCCHC23Q6ZST2 131 aa12.16□□□□□ -0.46
HOMER3-212ENST00000600077 GTF2IRD2Q86UP8 949 aa12.16□□□□□ -0.46
HOMER3-212ENST00000600077 SLC44A2Q8IWA5 706 aaPredicted RBP12.16□□□□□ -0.46
HOMER3-212ENST00000600077 OR2T11Q8NH01 316 aa12.16□□□□□ -0.46
HOMER3-212ENST00000600077 HTRA1Q92743 480 aa12.16□□□□□ -0.46
HOMER3-212ENST00000600077 KISS1RQ969F8 398 aaPredicted RBP12.16□□□□□ -0.46
HOMER3-212ENST00000600077 SLC35A4Q96G79 324 aa12.16□□□□□ -0.46
HOMER3-212ENST00000600077 PPP3R2Q96LZ3 170 aa12.16□□□□□ -0.46
HOMER3-212ENST00000600077 DHRS9Q9BPW9 319 aa12.16□□□□□ -0.46
HOMER3-212ENST00000600077 RBM4Q9BWF3 364 aaKnown RBP12.16□□□□□ -0.46
HOMER3-212ENST00000600077 MCTS1Q9ULC4 181 aaKnown RBP12.16□□□□□ -0.46
HOMER3-212ENST00000600077 CLEC4AQ9UMR7 237 aa12.16□□□□□ -0.46
HOMER3-212ENST00000600077 TRAF6Q9Y4K3 522 aa12.16□□□□□ -0.46
HOMER3-212ENST00000600077 TMEM114B3SHH9 223 aa12.15□□□□□ -0.46
HOMER3-212ENST00000600077 PIP5K1BO14986 540 aa12.15□□□□□ -0.46
HOMER3-212ENST00000600077 LSM1O15116 133 aaKnown RBP12.15□□□□□ -0.46
HOMER3-212ENST00000600077 NME6O75414 186 aaPredicted RBP12.15□□□□□ -0.46
HOMER3-212ENST00000600077 GCM2O75603 506 aaPredicted RBP12.15□□□□□ -0.46
HOMER3-212ENST00000600077 FGF4P08620 206 aa12.15□□□□□ -0.46
HOMER3-212ENST00000600077 CT45A8P0DMV1 189 aa12.15□□□□□ -0.46
HOMER3-212ENST00000600077 CT45A9P0DMV2 189 aa12.15□□□□□ -0.46
HOMER3-212ENST00000600077 SDC1P18827 310 aa12.15□□□□□ -0.46
HOMER3-212ENST00000600077 HPCAL1P37235 193 aa12.15□□□□□ -0.46
HOMER3-212ENST00000600077 ASMTP46597 345 aa12.15□□□□□ -0.46
HOMER3-212ENST00000600077 SLC18A1P54219 525 aa12.15□□□□□ -0.46
HOMER3-212ENST00000600077 HSPB3Q12988 150 aa12.15□□□□□ -0.46
HOMER3-212ENST00000600077 KIAA0040Q15053 153 aa12.15□□□□□ -0.46
HOMER3-212ENST00000600077 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.15□□□□□ -0.46
HOMER3-212ENST00000600077 CT45A2Q5DJT8 189 aa12.15□□□□□ -0.46
HOMER3-212ENST00000600077 TREML4Q6UXN2 200 aa12.15□□□□□ -0.46
HOMER3-212ENST00000600077 NPSR1Q6W5P4 371 aa12.15□□□□□ -0.46
HOMER3-212ENST00000600077 DEF8Q6ZN54 512 aa12.15□□□□□ -0.46
HOMER3-212ENST00000600077 Q6ZSR9 355 aa12.15□□□□□ -0.46
HOMER3-212ENST00000600077 LARP4Q71RC2 724 aaKnown RBP eCLIP12.15□□□□□ -0.46
HOMER3-212ENST00000600077 ATG4DQ86TL0 474 aaPredicted RBP12.15□□□□□ -0.46
HOMER3-212ENST00000600077 GABRG1Q8N1C3 465 aa12.15□□□□□ -0.46
HOMER3-212ENST00000600077 ZNF619Q8N2I2 560 aa12.15□□□□□ -0.46
HOMER3-212ENST00000600077 ZNF540Q8NDQ6 660 aa12.15□□□□□ -0.46
HOMER3-212ENST00000600077 CLHC1Q8NHS4 586 aa12.15□□□□□ -0.46
HOMER3-212ENST00000600077 ZNF418Q8TF45 676 aaPredicted RBP12.15□□□□□ -0.46
HOMER3-212ENST00000600077 C3orf49Q96BT1 292 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms