RNA–Protein interactions for RNA: ENST00000596332.1

LIG1-210, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-210ENST00000596332 UBL4AP11441 157 aa9.57□□□□□ -0.88
LIG1-210ENST00000596332 EDN3P14138 238 aa9.57□□□□□ -0.88
LIG1-210ENST00000596332 BMP7P18075 431 aa9.57□□□□□ -0.88
LIG1-210ENST00000596332 GGT1P19440 569 aa9.57□□□□□ -0.88
LIG1-210ENST00000596332 FUT4P22083 530 aa9.57□□□□□ -0.88
LIG1-210ENST00000596332 GDF1P27539 372 aa9.57□□□□□ -0.88
LIG1-210ENST00000596332 HTR1EP28566 365 aa9.57□□□□□ -0.88
LIG1-210ENST00000596332 PRKAR1BP31321 381 aa9.57□□□□□ -0.88
LIG1-210ENST00000596332 KDELR2P33947 212 aa9.57□□□□□ -0.88
LIG1-210ENST00000596332 UQCRFS1P47985 274 aa9.57□□□□□ -0.88
LIG1-210ENST00000596332 MASP1P48740 699 aa9.57□□□□□ -0.88
LIG1-210ENST00000596332 MS4A2Q01362 244 aa9.57□□□□□ -0.88
LIG1-210ENST00000596332 PLGLB1Q02325 96 aa9.57□□□□□ -0.88
LIG1-210ENST00000596332 CRYZQ08257 329 aaKnown RBP9.57□□□□□ -0.88
LIG1-210ENST00000596332 EPS8Q12929 822 aa9.57□□□□□ -0.88
LIG1-210ENST00000596332 MRPL49Q13405 166 aaKnown RBP9.57□□□□□ -0.88
LIG1-210ENST00000596332 CYP51A1Q16850 503 aa9.57□□□□□ -0.88
LIG1-210ENST00000596332 PLPPR5Q32ZL2 321 aa9.57□□□□□ -0.88
LIG1-210ENST00000596332 GLYR1Q49A26 553 aaPredicted RBP9.57□□□□□ -0.88
LIG1-210ENST00000596332 IQCCQ4KMZ1 466 aa9.57□□□□□ -0.88
LIG1-210ENST00000596332 KRTCAP3Q53RY4 240 aa9.57□□□□□ -0.88
LIG1-210ENST00000596332 ZNF311Q5JNZ3 666 aa9.57□□□□□ -0.88
LIG1-210ENST00000596332 Q6ZPB1 254 aaPredicted RBP9.57□□□□□ -0.88
LIG1-210ENST00000596332 EIF3MQ7L2H7 374 aaKnown RBP9.57□□□□□ -0.88
LIG1-210ENST00000596332 ARPINQ7Z6K5 226 aa9.57□□□□□ -0.88
LIG1-210ENST00000596332 IFNEQ86WN2 208 aa9.57□□□□□ -0.88
LIG1-210ENST00000596332 RBM45Q8IUH3 476 aaKnown RBP9.57□□□□□ -0.88
LIG1-210ENST00000596332 MISPQ8IVT2 679 aa9.57□□□□□ -0.88
LIG1-210ENST00000596332 CMIPQ8IY22 773 aa9.57□□□□□ -0.88
LIG1-210ENST00000596332 SMYD1Q8NB12 490 aa9.57□□□□□ -0.88
LIG1-210ENST00000596332 ZNF527Q8NB42 609 aa9.57□□□□□ -0.88
LIG1-210ENST00000596332 FAM98AQ8NCA5 519 aaKnown RBP9.57□□□□□ -0.88
LIG1-210ENST00000596332 ST6GALNAC3Q8NDV1 305 aa9.57□□□□□ -0.88
LIG1-210ENST00000596332 OR2T12Q8NG77 320 aa9.57□□□□□ -0.88
LIG1-210ENST00000596332 OR5M1Q8NGP8 315 aa9.57□□□□□ -0.88
LIG1-210ENST00000596332 OR5W2Q8NH69 310 aa9.57□□□□□ -0.88
LIG1-210ENST00000596332 NEIL3Q8TAT5 605 aa9.57□□□□□ -0.88
LIG1-210ENST00000596332 WDR60Q8WVS4 1066 aa9.57□□□□□ -0.88
LIG1-210ENST00000596332 ALG2Q9H553 416 aa9.57□□□□□ -0.88
LIG1-210ENST00000596332 SPAG4Q9NPE6 437 aa9.57□□□□□ -0.88
LIG1-210ENST00000596332 EXOSC3Q9NQT5 275 aaKnown RBP9.57□□□□□ -0.88
LIG1-210ENST00000596332 MED17Q9NVC6 651 aa9.57□□□□□ -0.88
LIG1-210ENST00000596332 IFT52Q9Y366 437 aa9.57□□□□□ -0.88
LIG1-210ENST00000596332 ZNF337Q9Y3M9 751 aa9.57□□□□□ -0.88
LIG1-210ENST00000596332 MED12Q93074 2177 aa9.57□□□□□ -0.88
LIG1-210ENST00000596332 HEATR5AQ86XA9 2040 aa9.56□□□□□ -0.88
LIG1-210ENST00000596332 FLNCQ14315 2725 aa9.56□□□□□ -0.88
LIG1-210ENST00000596332 NBASA2RRP1 2371 aa9.56□□□□□ -0.88
LIG1-210ENST00000596332 POLEQ07864 2286 aa9.56□□□□□ -0.88
LIG1-210ENST00000596332 OR2M5A3KFT3 312 aa9.56□□□□□ -0.88
LIG1-210ENST00000596332 C7orf72A4D263 438 aa9.56□□□□□ -0.88
LIG1-210ENST00000596332 FAAHO00519 579 aa9.56□□□□□ -0.88
LIG1-210ENST00000596332 AQP7O14520 342 aa9.56□□□□□ -0.88
LIG1-210ENST00000596332 TFECO14948 347 aaPredicted RBP9.56□□□□□ -0.88
LIG1-210ENST00000596332 HCN1O60741 890 aa9.56□□□□□ -0.88
LIG1-210ENST00000596332 LYPD3O95274 346 aa9.56□□□□□ -0.88
LIG1-210ENST00000596332 THY1P04216 161 aa9.56□□□□□ -0.88
LIG1-210ENST00000596332 GKN3PP0CG01 181 aa9.56□□□□□ -0.88
LIG1-210ENST00000596332 NCK1P16333 377 aa9.56□□□□□ -0.88
LIG1-210ENST00000596332 IL7RP16871 459 aa9.56□□□□□ -0.88
LIG1-210ENST00000596332 PRKCAP17252 672 aa9.56□□□□□ -0.88
LIG1-210ENST00000596332 HTR2AP28223 471 aa9.56□□□□□ -0.88
LIG1-210ENST00000596332 STARP49675 285 aa9.56□□□□□ -0.88
LIG1-210ENST00000596332 CLK3P49761 638 aaKnown RBP9.56□□□□□ -0.88
LIG1-210ENST00000596332 LHX2P50458 406 aa9.56□□□□□ -0.88
LIG1-210ENST00000596332 HOXC5Q00444 222 aa9.56□□□□□ -0.88
LIG1-210ENST00000596332 SRSF1Q07955 248 aaKnown RBP eCLIP9.56□□□□□ -0.881e-5■■■□□ 17.8
LIG1-210ENST00000596332 C19orf57Q0VDD7 668 aa9.56□□□□□ -0.88
LIG1-210ENST00000596332 GNA13Q14344 377 aa9.56□□□□□ -0.88
LIG1-210ENST00000596332 NRF1Q16656 503 aa9.56□□□□□ -0.88
LIG1-210ENST00000596332 RTL6Q6ICC9 239 aa9.56□□□□□ -0.88
LIG1-210ENST00000596332 ERICH5Q6P6B1 374 aa9.56□□□□□ -0.88
LIG1-210ENST00000596332 PEX5LQ8IYB4 626 aa9.56□□□□□ -0.88
LIG1-210ENST00000596332 GTPBP8Q8N3Z3 284 aaPredicted RBP9.56□□□□□ -0.88
LIG1-210ENST00000596332 ZNF614Q8N883 585 aa9.56□□□□□ -0.88
LIG1-210ENST00000596332 TOR1AIP2Q8NFQ8 470 aa9.56□□□□□ -0.88
LIG1-210ENST00000596332 OR10Q1Q8NGQ4 319 aa9.56□□□□□ -0.88
LIG1-210ENST00000596332 PHF10Q8WUB8 498 aaKnown RBP9.56□□□□□ -0.88
LIG1-210ENST00000596332 CLPTM1LQ96KA5 538 aa9.56□□□□□ -0.88
LIG1-210ENST00000596332 TIMP4Q99727 224 aa9.56□□□□□ -0.88
LIG1-210ENST00000596332 ARHGDIGQ99819 225 aa9.56□□□□□ -0.88
LIG1-210ENST00000596332 UGT2B28Q9BY64 529 aa9.56□□□□□ -0.88
LIG1-210ENST00000596332 CADM1Q9BY67 442 aaKnown RBP9.56□□□□□ -0.88
LIG1-210ENST00000596332 ADAM19Q9H013 955 aa9.56□□□□□ -0.88
LIG1-210ENST00000596332 PCDHAC1Q9H158 963 aa9.56□□□□□ -0.88
LIG1-210ENST00000596332 AGPAT4Q9NRZ5 378 aa9.56□□□□□ -0.88
LIG1-210ENST00000596332 TAS2R10Q9NYW0 307 aa9.56□□□□□ -0.88
LIG1-210ENST00000596332 SEC14L3Q9UDX4 400 aa9.56□□□□□ -0.88
LIG1-210ENST00000596332 SLC35A3Q9Y2D2 325 aa9.56□□□□□ -0.88
LIG1-210ENST00000596332 AP3M1Q9Y2T2 418 aa9.56□□□□□ -0.88
LIG1-210ENST00000596332 ZNF407Q9C0G0 2248 aa9.56□□□□□ -0.88
LIG1-210ENST00000596332 TENM4Q6N022 2769 aa9.55□□□□□ -0.88
LIG1-210ENST00000596332 FREM3P0C091 2139 aa9.55□□□□□ -0.88
LIG1-210ENST00000596332 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.55□□□□□ -0.88
LIG1-210ENST00000596332 TRGV5A0A0B4J1U4 118 aa9.55□□□□□ -0.88
LIG1-210ENST00000596332 C5orf58C9J3I9 102 aa9.55□□□□□ -0.88
LIG1-210ENST00000596332 H0YC42 278 aa9.55□□□□□ -0.88
LIG1-210ENST00000596332 GTPBP1O00178 669 aaKnown RBP9.55□□□□□ -0.88
LIG1-210ENST00000596332 CXCR6O00574 342 aa9.55□□□□□ -0.88
LIG1-210ENST00000596332 GSC2O15499 205 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms