RNA–Protein interactions for RNA: ENST00000590630.5

LIG3-213, Transcript of DNA ligase 3, humanhuman

TSL 5

Gene LIG3, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-213ENST00000590630 ADGRE4PQ86SQ3 457 aa10.75□□□□□ -0.69
LIG3-213ENST00000590630 DHDDSQ86SQ9 333 aa10.75□□□□□ -0.69
LIG3-213ENST00000590630 CMIPQ8IY22 773 aa10.75□□□□□ -0.69
LIG3-213ENST00000590630 PEX5LQ8IYB4 626 aa10.75□□□□□ -0.69
LIG3-213ENST00000590630 MEIOBQ8N635 442 aa10.75□□□□□ -0.69
LIG3-213ENST00000590630 TMCO5AQ8N6Q1 288 aa10.75□□□□□ -0.69
LIG3-213ENST00000590630 FAM71CQ8NEG0 241 aa10.75□□□□□ -0.69
LIG3-213ENST00000590630 OR10Q1Q8NGQ4 319 aa10.75□□□□□ -0.69
LIG3-213ENST00000590630 SLC38A5Q8WUX1 472 aa10.75□□□□□ -0.69
LIG3-213ENST00000590630 C10orf82Q8WW14 230 aa10.75□□□□□ -0.69
LIG3-213ENST00000590630 ZG16BQ96DA0 208 aa10.75□□□□□ -0.69
LIG3-213ENST00000590630 ARSGQ96EG1 525 aa10.75□□□□□ -0.69
LIG3-213ENST00000590630 UCN2Q96RP3 112 aa10.75□□□□□ -0.69
LIG3-213ENST00000590630 TREX2Q9BQ50 279 aaPredicted RBP10.75□□□□□ -0.69
LIG3-213ENST00000590630 TUBA1CQ9BQE3 449 aa10.75□□□□□ -0.69
LIG3-213ENST00000590630 LAT2Q9GZY6 243 aa10.75□□□□□ -0.69
LIG3-213ENST00000590630 RUBCNLQ9H714 662 aa10.75□□□□□ -0.69
LIG3-213ENST00000590630 A4GALTQ9NPC4 353 aa10.75□□□□□ -0.69
LIG3-213ENST00000590630 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.75□□□□□ -0.69
LIG3-213ENST00000590630 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.75□□□□□ -0.69
LIG3-213ENST00000590630 RNF6Q9Y252 685 aa10.75□□□□□ -0.69
LIG3-213ENST00000590630 GPC6Q9Y625 555 aaPredicted RBP10.75□□□□□ -0.69
LIG3-213ENST00000590630 DSPPQ9NZW4 1301 aa10.75□□□□□ -0.69
LIG3-213ENST00000590630 HCFC1P51610 2035 aa10.75□□□□□ -0.69
LIG3-213ENST00000590630 A0A0G2JPF8 293 aa10.74□□□□□ -0.69
LIG3-213ENST00000590630 MBD3L4A6NDZ8 208 aaPredicted RBP10.74□□□□□ -0.69
LIG3-213ENST00000590630 MBD3L3A6NE82 208 aaPredicted RBP10.74□□□□□ -0.69
LIG3-213ENST00000590630 MBD3L5A6NJ08 208 aaPredicted RBP10.74□□□□□ -0.69
LIG3-213ENST00000590630 HSPB2A8KAH6 182 aa10.74□□□□□ -0.69
LIG3-213ENST00000590630 EVPLLA8MZ36 301 aa10.74□□□□□ -0.69
LIG3-213ENST00000590630 HNRNPCL2B2RXH8 293 aa10.74□□□□□ -0.69
LIG3-213ENST00000590630 HNRNPCL3B7ZW38 293 aa10.74□□□□□ -0.69
LIG3-213ENST00000590630 H3BML4 177 aa10.74□□□□□ -0.69
LIG3-213ENST00000590630 SLC22A2O15244 555 aa10.74□□□□□ -0.69
LIG3-213ENST00000590630 OIP5O43482 229 aa10.74□□□□□ -0.69
LIG3-213ENST00000590630 HNRNPCL1O60812 293 aaKnown RBP10.74□□□□□ -0.69
LIG3-213ENST00000590630 DNAJA2O60884 412 aa10.74□□□□□ -0.69
LIG3-213ENST00000590630 IL2RAP01589 272 aa10.74□□□□□ -0.69
LIG3-213ENST00000590630 BCHEP06276 602 aa10.74□□□□□ -0.69
LIG3-213ENST00000590630 DBIP07108 87 aaKnown RBP10.74□□□□□ -0.69
LIG3-213ENST00000590630 UBTFL6P0CB48 400 aaPredicted RBP10.74□□□□□ -0.69
LIG3-213ENST00000590630 HNRNPCL4P0DMR1 293 aa10.74□□□□□ -0.69
LIG3-213ENST00000590630 NID1P14543 1247 aa10.74□□□□□ -0.69
LIG3-213ENST00000590630 IL7RP16871 459 aa10.74□□□□□ -0.69
LIG3-213ENST00000590630 GPX2P18283 190 aa10.74□□□□□ -0.69
LIG3-213ENST00000590630 ME2P23368 584 aa10.74□□□□□ -0.69
LIG3-213ENST00000590630 PSMA4P25789 261 aaKnown RBP10.74□□□□□ -0.69
LIG3-213ENST00000590630 ELK4P28324 431 aa10.74□□□□□ -0.69
LIG3-213ENST00000590630 ADH6P28332 368 aa10.74□□□□□ -0.69
LIG3-213ENST00000590630 LSP1P33241 339 aa10.74□□□□□ -0.69
LIG3-213ENST00000590630 PGM1P36871 562 aa10.74□□□□□ -0.69
LIG3-213ENST00000590630 CCR4P51679 360 aa10.74□□□□□ -0.69
LIG3-213ENST00000590630 KCNJ10P78508 379 aa10.74□□□□□ -0.69
LIG3-213ENST00000590630 KLF10Q13118 480 aa10.74□□□□□ -0.69
LIG3-213ENST00000590630 MAPRE2Q15555 327 aa10.74□□□□□ -0.69
LIG3-213ENST00000590630 MAPK11Q15759 364 aa10.74□□□□□ -0.69
LIG3-213ENST00000590630 HSPB2Q16082 182 aa10.74□□□□□ -0.69
LIG3-213ENST00000590630 NDUFAF6Q330K2 333 aa10.74□□□□□ -0.69
LIG3-213ENST00000590630 COQ5Q5HYK3 327 aa10.74□□□□□ -0.69
LIG3-213ENST00000590630 SEM1Q6ZVN7 128 aa10.74□□□□□ -0.69
LIG3-213ENST00000590630 CHMP1BQ7LBR1 199 aa10.74□□□□□ -0.69
LIG3-213ENST00000590630 RETREG3Q86VR2 466 aa10.74□□□□□ -0.69
LIG3-213ENST00000590630 METTL25Q8N6Q8 603 aa10.74□□□□□ -0.69
LIG3-213ENST00000590630 OR5M1Q8NGP8 315 aa10.74□□□□□ -0.69
LIG3-213ENST00000590630 LILRB4Q8NHJ6 448 aa10.74□□□□□ -0.69
LIG3-213ENST00000590630 MBD3L2Q8NHZ7 208 aaPredicted RBP10.74□□□□□ -0.69
LIG3-213ENST00000590630 GPR119Q8TDV5 335 aa10.74□□□□□ -0.69
LIG3-213ENST00000590630 TMEM19Q96HH6 336 aa10.74□□□□□ -0.69
LIG3-213ENST00000590630 MRGPRX4Q96LA9 322 aa10.74□□□□□ -0.69
LIG3-213ENST00000590630 RNF145Q96MT1 663 aa10.74□□□□□ -0.69
LIG3-213ENST00000590630 TRIB1Q96RU8 372 aa10.74□□□□□ -0.69
LIG3-213ENST00000590630 KLHDC3Q9BQ90 382 aa10.74□□□□□ -0.69
LIG3-213ENST00000590630 NSRP1Q9H0G5 558 aaKnown RBP10.74□□□□□ -0.69
LIG3-213ENST00000590630 QRSL1Q9H0R6 528 aaKnown RBP10.74□□□□□ -0.69
LIG3-213ENST00000590630 EXOSC3Q9NQT5 275 aaKnown RBP10.74□□□□□ -0.69
LIG3-213ENST00000590630 PKDREJQ9NTG1 2253 aa10.74□□□□□ -0.69
LIG3-213ENST00000590630 A0A0G2JNJ9 132 aa10.73□□□□□ -0.69
LIG3-213ENST00000590630 CLCA1A8K7I4 914 aa10.73□□□□□ -0.69
LIG3-213ENST00000590630 BBIP1A8MTZ0 92 aa10.73□□□□□ -0.69
LIG3-213ENST00000590630 SHISA8B8ZZ34 492 aa10.73□□□□□ -0.69
LIG3-213ENST00000590630 PRSS44E7EML9 344 aa10.73□□□□□ -0.69
LIG3-213ENST00000590630 ETV2O00321 342 aaPredicted RBP10.73□□□□□ -0.69
LIG3-213ENST00000590630 CYP7B1O75881 506 aa10.73□□□□□ -0.69
LIG3-213ENST00000590630 PRKCAP17252 672 aa10.73□□□□□ -0.69
LIG3-213ENST00000590630 PGCP20142 388 aa10.73□□□□□ -0.69
LIG3-213ENST00000590630 HTR1EP28566 365 aa10.73□□□□□ -0.69
LIG3-213ENST00000590630 CEACAM8P31997 349 aaPredicted RBP10.73□□□□□ -0.69
LIG3-213ENST00000590630 SLC6A8P48029 635 aa10.73□□□□□ -0.69
LIG3-213ENST00000590630 RAC1P63000 192 aa10.73□□□□□ -0.69
LIG3-213ENST00000590630 FOXF1Q12946 379 aa10.73□□□□□ -0.69
LIG3-213ENST00000590630 NFYCQ13952 458 aa10.73□□□□□ -0.69
LIG3-213ENST00000590630 QPRTQ15274 297 aa10.73□□□□□ -0.69
LIG3-213ENST00000590630 CDSNQ15517 529 aa10.73□□□□□ -0.69
LIG3-213ENST00000590630 RUNDC3AQ59EK9 446 aa10.73□□□□□ -0.69
LIG3-213ENST00000590630 SLC25A53Q5H9E4 307 aa10.73□□□□□ -0.69
LIG3-213ENST00000590630 GCNT6Q5T4J0 391 aa10.73□□□□□ -0.69
LIG3-213ENST00000590630 SPATA21Q7Z572 469 aa10.73□□□□□ -0.69
LIG3-213ENST00000590630 CCDC71Q8IV32 467 aaPredicted RBP10.73□□□□□ -0.69
LIG3-213ENST00000590630 UBQLNLQ8IYU4 475 aa10.73□□□□□ -0.69
LIG3-213ENST00000590630 WDR60Q8WVS4 1066 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms