RNA–Protein interactions for RNA: ENST00000589753.1

ATG4D-211, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-211ENST00000589753 SH3GLB1Q9Y371 365 aa13.83□□□□□ -0.2
ATG4D-211ENST00000589753 V9GYQ6 96 aa13.83□□□□□ -0.2
ATG4D-211ENST00000589753 LAMA5O15230 3695 aa13.83□□□□□ -0.2
ATG4D-211ENST00000589753 EML6Q6ZMW3 1958 aa13.83□□□□□ -0.2
ATG4D-211ENST00000589753 MAP1BP46821 2468 aaKnown RBP13.82□□□□□ -0.2
ATG4D-211ENST00000589753 MGAQ8IWI9 3026 aa13.82□□□□□ -0.2
ATG4D-211ENST00000589753 ANKUB1A6NFN9 424 aa13.82□□□□□ -0.2
ATG4D-211ENST00000589753 B4DXG7 233 aa13.82□□□□□ -0.2
ATG4D-211ENST00000589753 ANKRD65E5RJM6 399 aa13.82□□□□□ -0.2
ATG4D-211ENST00000589753 M0R3H8 397 aa13.82□□□□□ -0.2
ATG4D-211ENST00000589753 FRS3O43559 492 aa13.82□□□□□ -0.2
ATG4D-211ENST00000589753 NUDT14O95848 222 aa13.82□□□□□ -0.2
ATG4D-211ENST00000589753 RYKP34925 604 aa13.82□□□□□ -0.2
ATG4D-211ENST00000589753 RFC3P40938 356 aa13.82□□□□□ -0.2
ATG4D-211ENST00000589753 SLC6A8P48029 635 aa13.82□□□□□ -0.2
ATG4D-211ENST00000589753 RGS8P57771 180 aaPredicted RBP13.82□□□□□ -0.2
ATG4D-211ENST00000589753 CBFBQ13951 182 aa13.82□□□□□ -0.2
ATG4D-211ENST00000589753 INAQ16352 499 aa13.82□□□□□ -0.2
ATG4D-211ENST00000589753 NRF1Q16656 503 aa13.82□□□□□ -0.2
ATG4D-211ENST00000589753 IFI44LQ53G44 452 aa13.82□□□□□ -0.2
ATG4D-211ENST00000589753 SPATA24Q86W54 205 aa13.82□□□□□ -0.2
ATG4D-211ENST00000589753 FAM86B1Q8N7N1 296 aa13.82□□□□□ -0.2
ATG4D-211ENST00000589753 OR5W2Q8NH69 310 aa13.82□□□□□ -0.2
ATG4D-211ENST00000589753 VANGL1Q8TAA9 524 aaPredicted RBP13.82□□□□□ -0.2
ATG4D-211ENST00000589753 DTNBP1Q96EV8 351 aa13.82□□□□□ -0.2
ATG4D-211ENST00000589753 LUZP4Q9P127 313 aa13.82□□□□□ -0.2
ATG4D-211ENST00000589753 ACOT7O00154 380 aa13.81□□□□□ -0.2
ATG4D-211ENST00000589753 ADAM11O75078 769 aa13.81□□□□□ -0.2
ATG4D-211ENST00000589753 GLSO94925 669 aaPredicted RBP13.81□□□□□ -0.2
ATG4D-211ENST00000589753 RFPL3SP0C7P2 107 aa13.81□□□□□ -0.2
ATG4D-211ENST00000589753 PRG2P13727 222 aa13.81□□□□□ -0.2
ATG4D-211ENST00000589753 UQCRBP14927 111 aa13.81□□□□□ -0.2
ATG4D-211ENST00000589753 PGCP20142 388 aa13.81□□□□□ -0.2
ATG4D-211ENST00000589753 TNFRSF1BP20333 461 aa13.81□□□□□ -0.2
ATG4D-211ENST00000589753 GDF1P27539 372 aa13.81□□□□□ -0.2
ATG4D-211ENST00000589753 OR1E2P47887 323 aa13.81□□□□□ -0.2
ATG4D-211ENST00000589753 PMP22Q01453 160 aa13.81□□□□□ -0.2
ATG4D-211ENST00000589753 KLRB1Q12918 225 aa13.81□□□□□ -0.2
ATG4D-211ENST00000589753 EPS8Q12929 822 aa13.81□□□□□ -0.2
ATG4D-211ENST00000589753 HYAL4Q2M3T9 481 aa13.81□□□□□ -0.2
ATG4D-211ENST00000589753 RANBP3LQ86VV4 465 aaPredicted RBP13.81□□□□□ -0.2
ATG4D-211ENST00000589753 SLC22A16Q86VW1 577 aa13.81□□□□□ -0.2
ATG4D-211ENST00000589753 CARM1Q86X55 608 aa13.81□□□□□ -0.2
ATG4D-211ENST00000589753 LACC1Q8IV20 430 aa13.81□□□□□ -0.2
ATG4D-211ENST00000589753 GPR119Q8TDV5 335 aa13.81□□□□□ -0.2
ATG4D-211ENST00000589753 GEMIN6Q8WXD5 167 aaKnown RBP13.81□□□□□ -0.2
ATG4D-211ENST00000589753 SLC39A7Q92504 469 aa13.81□□□□□ -0.2
ATG4D-211ENST00000589753 ARSGQ96EG1 525 aa13.81□□□□□ -0.2
ATG4D-211ENST00000589753 C1GALT1C1Q96EU7 318 aa13.81□□□□□ -0.2
ATG4D-211ENST00000589753 UBL7Q96S82 380 aaPredicted RBP13.81□□□□□ -0.2
ATG4D-211ENST00000589753 WFDC6Q9BQY6 131 aa13.81□□□□□ -0.2
ATG4D-211ENST00000589753 UGT2B28Q9BY64 529 aa13.81□□□□□ -0.2
ATG4D-211ENST00000589753 ZNF703Q9H7S9 590 aaPredicted RBP13.81□□□□□ -0.2
ATG4D-211ENST00000589753 TCRBV3S1A0A5B6 114 aa13.8□□□□□ -0.2
ATG4D-211ENST00000589753 FAM166BA8MTA8 275 aa13.8□□□□□ -0.2
ATG4D-211ENST00000589753 FAM47E-STBD1D6RA91 191 aa13.8□□□□□ -0.2
ATG4D-211ENST00000589753 AP3D1O14617 1153 aa13.8□□□□□ -0.2
ATG4D-211ENST00000589753 CDC40O60508 579 aaKnown RBP eCLIP13.8□□□□□ -0.2
ATG4D-211ENST00000589753 IFNW1P05000 195 aa13.8□□□□□ -0.2
ATG4D-211ENST00000589753 LINGO3P0C6S8 592 aa13.8□□□□□ -0.2
ATG4D-211ENST00000589753 UMPSP11172 480 aa13.8□□□□□ -0.2
ATG4D-211ENST00000589753 ACAA2P42765 397 aaKnown RBP13.8□□□□□ -0.2
ATG4D-211ENST00000589753 ERFP50548 548 aa13.8□□□□□ -0.2
ATG4D-211ENST00000589753 ZNF41P51814 821 aaPredicted RBP13.8□□□□□ -0.2
ATG4D-211ENST00000589753 ZNF136P52737 540 aa13.8□□□□□ -0.2
ATG4D-211ENST00000589753 DSCR4P56555 118 aaPredicted RBP13.8□□□□□ -0.2
ATG4D-211ENST00000589753 PPIAP62937 165 aaKnown RBP13.8□□□□□ -0.2
ATG4D-211ENST00000589753 HOXC5Q00444 222 aa13.8□□□□□ -0.2
ATG4D-211ENST00000589753 KCNC4Q03721 635 aa13.8□□□□□ -0.2
ATG4D-211ENST00000589753 GANABQ14697 944 aaKnown RBP13.8□□□□□ -0.2
ATG4D-211ENST00000589753 TOMM20Q15388 145 aa13.8□□□□□ -0.2
ATG4D-211ENST00000589753 ARSKQ6UWY0 536 aa13.8□□□□□ -0.2
ATG4D-211ENST00000589753 RBM45Q8IUH3 476 aaKnown RBP13.8□□□□□ -0.2
ATG4D-211ENST00000589753 TMEM251Q8N6I4 163 aa13.8□□□□□ -0.2
ATG4D-211ENST00000589753 Q8NA96 180 aa13.8□□□□□ -0.2
ATG4D-211ENST00000589753 OR4D11Q8NGI4 311 aa13.8□□□□□ -0.2
ATG4D-211ENST00000589753 OR6T1Q8NGN1 323 aa13.8□□□□□ -0.2
ATG4D-211ENST00000589753 ZNF563Q8TA94 476 aa13.8□□□□□ -0.2
ATG4D-211ENST00000589753 SLC47A1Q96FL8 570 aa13.8□□□□□ -0.2
ATG4D-211ENST00000589753 SEPHS2Q99611 448 aa13.8□□□□□ -0.2
ATG4D-211ENST00000589753 KLHDC3Q9BQ90 382 aa13.8□□□□□ -0.2
ATG4D-211ENST00000589753 UBQLN3Q9H347 655 aa13.8□□□□□ -0.2
ATG4D-211ENST00000589753 TESQ9UGI8 421 aaKnown RBP13.8□□□□□ -0.2
ATG4D-211ENST00000589753 ANAPC2Q9UJX6 822 aa13.8□□□□□ -0.2
ATG4D-211ENST00000589753 DKKL1Q9UK85 242 aa13.8□□□□□ -0.2
ATG4D-211ENST00000589753 ZZEF1O43149 2961 aa13.8□□□□□ -0.2
ATG4D-211ENST00000589753 TPRP12270 2363 aaKnown RBP13.79□□□□□ -0.2
ATG4D-211ENST00000589753 A0A087WZY1 265 aa13.79□□□□□ -0.2
ATG4D-211ENST00000589753 DHRS12A0PJE2 317 aa13.79□□□□□ -0.2
ATG4D-211ENST00000589753 FAAHO00519 579 aa13.79□□□□□ -0.2
ATG4D-211ENST00000589753 TRAPPC6AO75865 159 aa13.79□□□□□ -0.2
ATG4D-211ENST00000589753 SEMG1P04279 462 aa13.79□□□□□ -0.2
ATG4D-211ENST00000589753 GPIP06744 558 aa13.79□□□□□ -0.2
ATG4D-211ENST00000589753 ZNF24P17028 368 aa13.79□□□□□ -0.2
ATG4D-211ENST00000589753 PSMA4P25789 261 aaKnown RBP13.79□□□□□ -0.2
ATG4D-211ENST00000589753 DPP4P27487 766 aa13.79□□□□□ -0.2
ATG4D-211ENST00000589753 SRD5A2P31213 254 aa13.79□□□□□ -0.2
ATG4D-211ENST00000589753 MAGEA5P43359 124 aa13.79□□□□□ -0.2
ATG4D-211ENST00000589753 IDH2P48735 452 aaKnown RBP13.79□□□□□ -0.2
ATG4D-211ENST00000589753 ACTR3P61158 418 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms