RNA–Protein interactions for RNA: ENST00000588555.1

SCAMP4-210, Transcript of secretory carrier membrane protein 4, humanhuman

Gene SCAMP4, Length 1,785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-210ENST00000588555 PGBD2Q6P3X8 592 aa23.84■■□□□ 1.41
SCAMP4-210ENST00000588555 LINC00471Q8N535 108 aa23.84■■□□□ 1.41
SCAMP4-210ENST00000588555 TOR1AIP2Q8NFQ8 470 aa23.84■■□□□ 1.41
SCAMP4-210ENST00000588555 GRHL3Q8TE85 626 aa23.84■■□□□ 1.41
SCAMP4-210ENST00000588555 NODALQ96S42 347 aa23.84■■□□□ 1.41
SCAMP4-210ENST00000588555 TRIM2Q9C040 744 aa23.84■■□□□ 1.41
SCAMP4-210ENST00000588555 CARD8Q9Y2G2 431 aa23.84■■□□□ 1.41
SCAMP4-210ENST00000588555 PCDHGB5Q9Y5G0 923 aa23.84■■□□□ 1.41
SCAMP4-210ENST00000588555 A0A0B4J2E0 115 aa23.83■■□□□ 1.41
SCAMP4-210ENST00000588555 A0A1B0GX12 115 aa23.83■■□□□ 1.41
SCAMP4-210ENST00000588555 TMED10P49755 219 aaKnown RBP23.83■■□□□ 1.41
SCAMP4-210ENST00000588555 PDK3Q15120 406 aa23.83■■□□□ 1.41
SCAMP4-210ENST00000588555 NUP54Q7Z3B4 507 aa23.83■■□□□ 1.41
SCAMP4-210ENST00000588555 GABARAPL3Q9BY60 117 aa23.83■■□□□ 1.41
SCAMP4-210ENST00000588555 TBL1XR1Q9BZK7 514 aa23.83■■□□□ 1.41
SCAMP4-210ENST00000588555 TMEM27Q9HBJ8 222 aa23.83■■□□□ 1.41
SCAMP4-210ENST00000588555 PAPOLBQ9NRJ5 636 aaKnown RBP23.83■■□□□ 1.41
SCAMP4-210ENST00000588555 MGAT4BQ9UQ53 548 aa23.83■■□□□ 1.41
SCAMP4-210ENST00000588555 POFUT2Q9Y2G5 429 aa23.83■■□□□ 1.41
SCAMP4-210ENST00000588555 A0A1B0GWA3 101 aa23.83■■□□□ 1.4
SCAMP4-210ENST00000588555 MAN1A2O60476 641 aa23.83■■□□□ 1.4
SCAMP4-210ENST00000588555 ITGA10O75578 1167 aa23.83■■□□□ 1.4
SCAMP4-210ENST00000588555 CLIC3O95833 236 aa23.83■■□□□ 1.4
SCAMP4-210ENST00000588555 ADAP00813 363 aa23.83■■□□□ 1.4
SCAMP4-210ENST00000588555 RPSAP08865 295 aaKnown RBP23.83■■□□□ 1.4
SCAMP4-210ENST00000588555 RYKP34925 604 aa23.83■■□□□ 1.4
SCAMP4-210ENST00000588555 IL1RL1Q01638 556 aa23.83■■□□□ 1.4
SCAMP4-210ENST00000588555 ZNF117Q03924 483 aa23.83■■□□□ 1.4
SCAMP4-210ENST00000588555 TGIF1Q15583 401 aa23.83■■□□□ 1.4
SCAMP4-210ENST00000588555 WDR88Q6ZMY6 472 aa23.83■■□□□ 1.4
SCAMP4-210ENST00000588555 ZER1Q7Z7L7 766 aa23.83■■□□□ 1.4
SCAMP4-210ENST00000588555 RAB43Q86YS6 212 aa23.83■■□□□ 1.4
SCAMP4-210ENST00000588555 APLFQ8IW19 511 aaPredicted RBP23.83■■□□□ 1.4
SCAMP4-210ENST00000588555 OR5M3Q8NGP4 307 aa23.83■■□□□ 1.4
SCAMP4-210ENST00000588555 ACOT11Q8WXI4 607 aaPredicted RBP23.83■■□□□ 1.4
SCAMP4-210ENST00000588555 TTC9Q92623 222 aa23.83■■□□□ 1.4
SCAMP4-210ENST00000588555 GTPBP3Q969Y2 492 aaKnown RBP23.83■■□□□ 1.4
SCAMP4-210ENST00000588555 DGCR6LQ9BY27 220 aa23.83■■□□□ 1.4
SCAMP4-210ENST00000588555 LAT2Q9GZY6 243 aa23.83■■□□□ 1.4
SCAMP4-210ENST00000588555 C17orf51A8MQB3 221 aa23.82■■□□□ 1.4
SCAMP4-210ENST00000588555 E9PQ18 207 aa23.82■■□□□ 1.4
SCAMP4-210ENST00000588555 GTPBP1O00178 669 aaKnown RBP23.82■■□□□ 1.4
SCAMP4-210ENST00000588555 SLC16A6O15403 523 aa23.82■■□□□ 1.4
SCAMP4-210ENST00000588555 NDUFB5O43674 189 aa23.82■■□□□ 1.4
SCAMP4-210ENST00000588555 SLC34A2O95436 690 aa23.82■■□□□ 1.4
SCAMP4-210ENST00000588555 ANGPTL1O95841 491 aa23.82■■□□□ 1.4
SCAMP4-210ENST00000588555 POU2F1P14859 743 aa23.82■■□□□ 1.4
SCAMP4-210ENST00000588555 MYF6P23409 242 aa23.82■■□□□ 1.4
SCAMP4-210ENST00000588555 CHAF1BQ13112 559 aa23.82■■□□□ 1.4
SCAMP4-210ENST00000588555 ATP1A4Q13733 1029 aa23.82■■□□□ 1.4
SCAMP4-210ENST00000588555 NTRK2Q16620 822 aa23.82■■□□□ 1.4
SCAMP4-210ENST00000588555 TMEM255BQ8WV15 326 aa23.82■■□□□ 1.4
SCAMP4-210ENST00000588555 TMCO6Q96DC7 493 aa23.82■■□□□ 1.4
SCAMP4-210ENST00000588555 SPACA9Q96E40 222 aaPredicted RBP23.82■■□□□ 1.4
SCAMP4-210ENST00000588555 GRIP2Q9C0E4 1043 aa23.82■■□□□ 1.4
SCAMP4-210ENST00000588555 CDH2P19022 906 aaPredicted RBP23.81■■□□□ 1.4
SCAMP4-210ENST00000588555 EPHA2P29317 976 aa23.81■■□□□ 1.4
SCAMP4-210ENST00000588555 RSPO4Q2I0M5 234 aaPredicted RBP23.81■■□□□ 1.4
SCAMP4-210ENST00000588555 ZNF791Q3KP31 576 aaPredicted RBP23.81■■□□□ 1.4
SCAMP4-210ENST00000588555 TTC23Q5W5X9 447 aa23.81■■□□□ 1.4
SCAMP4-210ENST00000588555 C1orf94Q6P1W5 598 aa23.81■■□□□ 1.4
SCAMP4-210ENST00000588555 ASPMQ8IZT6 3477 aa23.81■■□□□ 1.4
SCAMP4-210ENST00000588555 PARP8Q8N3A8 854 aa23.81■■□□□ 1.4
SCAMP4-210ENST00000588555 RIBC2Q9H4K1 309 aa23.81■■□□□ 1.4
SCAMP4-210ENST00000588555 ZNF556Q9HAH1 456 aa23.81■■□□□ 1.4
SCAMP4-210ENST00000588555 YARS2Q9Y2Z4 477 aaKnown RBP23.81■■□□□ 1.4
SCAMP4-210ENST00000588555 CHP2O43745 196 aa23.8■■□□□ 1.4
SCAMP4-210ENST00000588555 SERPINA7P05543 415 aa23.8■■□□□ 1.4
SCAMP4-210ENST00000588555 ENDOUP21128 410 aaKnown RBP23.8■■□□□ 1.4
SCAMP4-210ENST00000588555 SOX3P41225 446 aa23.8■■□□□ 1.4
SCAMP4-210ENST00000588555 RTP5Q14D33 572 aa23.8■■□□□ 1.4
SCAMP4-210ENST00000588555 FCRLBQ6BAA4 426 aa23.8■■□□□ 1.4
SCAMP4-210ENST00000588555 KLHL17Q6TDP4 642 aa23.8■■□□□ 1.4
SCAMP4-210ENST00000588555 ZNF730Q6ZMV8 503 aa23.8■■□□□ 1.4
SCAMP4-210ENST00000588555 RPS19BP1Q86WX3 136 aaKnown RBP23.8■■□□□ 1.4
SCAMP4-210ENST00000588555 LSRQ86X29 649 aaPredicted RBP23.8■■□□□ 1.4
SCAMP4-210ENST00000588555 NR1H4Q96RI1 486 aaPredicted RBP23.8■■□□□ 1.4
SCAMP4-210ENST00000588555 KLHDC3Q9BQ90 382 aa23.8■■□□□ 1.4
SCAMP4-210ENST00000588555 GPN2Q9H9Y4 310 aaPredicted RBP23.8■■□□□ 1.4
SCAMP4-210ENST00000588555 DCHS1Q96JQ0 3298 aa23.8■■□□□ 1.4
SCAMP4-210ENST00000588555 LOC100130705A0A1B0GUX0 176 aa23.8■■□□□ 1.4
SCAMP4-210ENST00000588555 SCO2O43819 266 aa23.8■■□□□ 1.4
SCAMP4-210ENST00000588555 EIF4E2O60573 245 aaKnown RBP23.8■■□□□ 1.4
SCAMP4-210ENST00000588555 LIPCP11150 499 aa23.8■■□□□ 1.4
SCAMP4-210ENST00000588555 MLF1P58340 268 aa23.8■■□□□ 1.4
SCAMP4-210ENST00000588555 NPRL3Q12980 569 aa23.8■■□□□ 1.4
SCAMP4-210ENST00000588555 H3F3CQ6NXT2 135 aa23.8■■□□□ 1.4
SCAMP4-210ENST00000588555 UGT2A3Q6UWM9 527 aa23.8■■□□□ 1.4
SCAMP4-210ENST00000588555 OR10G3Q8NGC4 313 aa23.8■■□□□ 1.4
SCAMP4-210ENST00000588555 GPA33Q99795 319 aa23.8■■□□□ 1.4
SCAMP4-210ENST00000588555 CDCP1Q9H5V8 836 aa23.8■■□□□ 1.4
SCAMP4-210ENST00000588555 ICAM5Q9UMF0 924 aa23.8■■□□□ 1.4
SCAMP4-210ENST00000588555 LINGO3P0C6S8 592 aa23.79■■□□□ 1.4
SCAMP4-210ENST00000588555 GAS1P54826 345 aa23.79■■□□□ 1.4
SCAMP4-210ENST00000588555 UGT2B15P54855 530 aa23.79■■□□□ 1.4
SCAMP4-210ENST00000588555 MBOAT2Q6ZWT7 520 aa23.79■■□□□ 1.4
SCAMP4-210ENST00000588555 ZNF555Q8NEP9 628 aa23.79■■□□□ 1.4
SCAMP4-210ENST00000588555 SH3YL1Q96HL8 342 aaPredicted RBP23.79■■□□□ 1.4
SCAMP4-210ENST00000588555 ZNF426Q9BUY5 554 aa23.79■■□□□ 1.4
SCAMP4-210ENST00000588555 HCRTR2O43614 444 aa23.78■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms