RNA–Protein interactions for RNA: ENST00000588210.1

CCDC43-203, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC43, Length 2,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-203ENST00000588210 LCMT2O60294 686 aaKnown RBP13.55□□□□□ -0.24
CCDC43-203ENST00000588210 CYP7B1O75881 506 aa13.55□□□□□ -0.24
CCDC43-203ENST00000588210 NR2F6P10588 404 aa13.55□□□□□ -0.24
CCDC43-203ENST00000588210 ACP2P11117 423 aa13.55□□□□□ -0.24
CCDC43-203ENST00000588210 S100A1P23297 94 aa13.55□□□□□ -0.24
CCDC43-203ENST00000588210 NCBP2P52298 156 aaKnown RBP eCLIP13.55□□□□□ -0.24
CCDC43-203ENST00000588210 ASAH1Q13510 395 aa13.55□□□□□ -0.24
CCDC43-203ENST00000588210 FLYWCH1Q4VC44 716 aa13.55□□□□□ -0.24
CCDC43-203ENST00000588210 TMEM35AQ53FP2 167 aa13.55□□□□□ -0.24
CCDC43-203ENST00000588210 ATAD3CQ5T2N8 411 aa13.55□□□□□ -0.24
CCDC43-203ENST00000588210 PRAMEF8Q5VWM4 474 aa13.55□□□□□ -0.24
CCDC43-203ENST00000588210 PRAMEF7Q5VXH5 474 aa13.55□□□□□ -0.24
CCDC43-203ENST00000588210 NXNL2Q5VZ03 156 aa13.55□□□□□ -0.24
CCDC43-203ENST00000588210 FCRL6Q6DN72 434 aa13.55□□□□□ -0.24
CCDC43-203ENST00000588210 ZNF793Q6ZN11 406 aa13.55□□□□□ -0.24
CCDC43-203ENST00000588210 KIF18BQ86Y91 864 aa13.55□□□□□ -0.24
CCDC43-203ENST00000588210 TMEM163Q8TC26 289 aa13.55□□□□□ -0.24
CCDC43-203ENST00000588210 NR4A3Q92570 626 aa13.55□□□□□ -0.24
CCDC43-203ENST00000588210 NEDD4LQ96PU5 975 aa13.55□□□□□ -0.24
CCDC43-203ENST00000588210 C17orf62Q9BQA9 187 aa13.55□□□□□ -0.24
CCDC43-203ENST00000588210 MDC1Q14676 2089 aaKnown RBP13.55□□□□□ -0.24
CCDC43-203ENST00000588210 A0A0G2JPF8 293 aa13.55□□□□□ -0.24
CCDC43-203ENST00000588210 A0A1W2PQ09 198 aa13.55□□□□□ -0.24
CCDC43-203ENST00000588210 LRIT2A6NDA9 550 aa13.55□□□□□ -0.24
CCDC43-203ENST00000588210 SNTNA6NMZ2 147 aa13.55□□□□□ -0.24
CCDC43-203ENST00000588210 HNRNPCL2B2RXH8 293 aa13.55□□□□□ -0.24
CCDC43-203ENST00000588210 HNRNPCL3B7ZW38 293 aa13.55□□□□□ -0.24
CCDC43-203ENST00000588210 TSPAN19P0C672 248 aa13.55□□□□□ -0.24
CCDC43-203ENST00000588210 TRAPPC2P0DI81 140 aa13.55□□□□□ -0.24
CCDC43-203ENST00000588210 TRAPPC2BP0DI82 140 aa13.55□□□□□ -0.24
CCDC43-203ENST00000588210 HNRNPCL4P0DMR1 293 aa13.55□□□□□ -0.24
CCDC43-203ENST00000588210 AZGP1P25311 298 aaKnown RBP13.55□□□□□ -0.24
CCDC43-203ENST00000588210 DDOSTP39656 456 aa13.55□□□□□ -0.24
CCDC43-203ENST00000588210 RPS5P46782 204 aaKnown RBP13.55□□□□□ -0.24
CCDC43-203ENST00000588210 SLC9A3P48764 834 aa13.55□□□□□ -0.24
CCDC43-203ENST00000588210 TGM4P49221 684 aa13.55□□□□□ -0.24
CCDC43-203ENST00000588210 HNRNPA0Q13151 305 aaKnown RBP13.55□□□□□ -0.24
CCDC43-203ENST00000588210 TPBGQ13641 420 aa13.55□□□□□ -0.24
CCDC43-203ENST00000588210 GPR19Q15760 415 aa13.55□□□□□ -0.24
CCDC43-203ENST00000588210 SNAPC1Q16533 368 aa13.55□□□□□ -0.24
CCDC43-203ENST00000588210 MINDY4Q4G0A6 757 aa13.55□□□□□ -0.24
CCDC43-203ENST00000588210 XKRXQ6PP77 449 aa13.55□□□□□ -0.24
CCDC43-203ENST00000588210 HSDL2Q6YN16 418 aa13.55□□□□□ -0.24
CCDC43-203ENST00000588210 KDF1Q8NAX2 398 aaPredicted RBP13.55□□□□□ -0.24
CCDC43-203ENST00000588210 TTLQ8NG68 377 aa13.55□□□□□ -0.24
CCDC43-203ENST00000588210 SNIP1Q8TAD8 396 aaKnown RBP13.55□□□□□ -0.24
CCDC43-203ENST00000588210 TEX47Q8TBZ9 253 aa13.55□□□□□ -0.24
CCDC43-203ENST00000588210 CAPSLQ8WWF8 208 aa13.55□□□□□ -0.24
CCDC43-203ENST00000588210 PMEPA1Q969W9 287 aa13.55□□□□□ -0.24
CCDC43-203ENST00000588210 MOAP1Q96BY2 351 aa13.55□□□□□ -0.24
CCDC43-203ENST00000588210 PLA2G12AQ9BZM1 189 aa13.55□□□□□ -0.24
CCDC43-203ENST00000588210 TP63Q9H3D4 680 aaPredicted RBP13.55□□□□□ -0.24
CCDC43-203ENST00000588210 FOXJ2Q9P0K8 574 aa13.55□□□□□ -0.24
CCDC43-203ENST00000588210 PLEKHB1Q9UF11 243 aaPredicted RBP13.55□□□□□ -0.24
CCDC43-203ENST00000588210 SERTAD3Q9UJW9 196 aa13.55□□□□□ -0.24
CCDC43-203ENST00000588210 SNX7Q9UNH6 387 aa13.55□□□□□ -0.24
CCDC43-203ENST00000588210 SPIN1Q9Y657 262 aaPredicted RBP13.55□□□□□ -0.24
CCDC43-203ENST00000588210 FREM2Q5SZK8 3169 aa13.55□□□□□ -0.24
CCDC43-203ENST00000588210 IGKV1-8A0A0C4DH67 115 aa13.54□□□□□ -0.24
CCDC43-203ENST00000588210 A0A0G2JN53 185 aa13.54□□□□□ -0.24
CCDC43-203ENST00000588210 SYT5O00445 386 aa13.54□□□□□ -0.24
CCDC43-203ENST00000588210 SEC14L5O43304 696 aa13.54□□□□□ -0.24
CCDC43-203ENST00000588210 RCVRNP35243 200 aa13.54□□□□□ -0.24
CCDC43-203ENST00000588210 GABRA4P48169 554 aa13.54□□□□□ -0.24
CCDC43-203ENST00000588210 MXD1Q05195 221 aa13.54□□□□□ -0.24
CCDC43-203ENST00000588210 SCN1BQ07699 218 aa13.54□□□□□ -0.24
CCDC43-203ENST00000588210 C22orf42Q6IC83 251 aa13.54□□□□□ -0.24
CCDC43-203ENST00000588210 BHLHB9Q6PI77 547 aa13.54□□□□□ -0.24
CCDC43-203ENST00000588210 QSOX2Q6ZRP7 698 aa13.54□□□□□ -0.24
CCDC43-203ENST00000588210 OLIG3Q7RTU3 272 aa13.54□□□□□ -0.24
CCDC43-203ENST00000588210 LAPTM4BQ86VI4 370 aa13.54□□□□□ -0.24
CCDC43-203ENST00000588210 GDPD1Q8N9F7 314 aa13.54□□□□□ -0.24
CCDC43-203ENST00000588210 GNPDA2Q8TDQ7 276 aa13.54□□□□□ -0.24
CCDC43-203ENST00000588210 TP53INP1Q96A56 240 aa13.54□□□□□ -0.24
CCDC43-203ENST00000588210 KIAA1143Q96AT1 154 aaPredicted RBP13.54□□□□□ -0.24
CCDC43-203ENST00000588210 RNFT2Q96EX2 444 aa13.54□□□□□ -0.24
CCDC43-203ENST00000588210 KCTD7Q96MP8 289 aa13.54□□□□□ -0.24
CCDC43-203ENST00000588210 BBS4Q96RK4 519 aa13.54□□□□□ -0.24
CCDC43-203ENST00000588210 ABCB9Q9NP78 766 aa13.54□□□□□ -0.24
CCDC43-203ENST00000588210 SLC6A20Q9NP91 592 aa13.54□□□□□ -0.24
CCDC43-203ENST00000588210 PLCL2Q9UPR0 1127 aa13.54□□□□□ -0.24
CCDC43-203ENST00000588210 EXOSC1Q9Y3B2 195 aaKnown RBP13.54□□□□□ -0.24
CCDC43-203ENST00000588210 SF3B6Q9Y3B4 125 aaKnown RBP13.54□□□□□ -0.24
CCDC43-203ENST00000588210 KDM4EB2RXH2 506 aaPredicted RBP13.54□□□□□ -0.24
CCDC43-203ENST00000588210 TMEM150CB9EJG8 249 aa13.54□□□□□ -0.24
CCDC43-203ENST00000588210 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.54□□□□□ -0.24
CCDC43-203ENST00000588210 FAM47E-STBD1D6RA91 191 aa13.54□□□□□ -0.24
CCDC43-203ENST00000588210 IDH3BO43837 385 aa13.54□□□□□ -0.24
CCDC43-203ENST00000588210 LSM11P83369 360 aaKnown RBP eCLIP13.54□□□□□ -0.247e-6■■■■□ 19.8
CCDC43-203ENST00000588210 HYAL2Q12891 473 aa13.54□□□□□ -0.24
CCDC43-203ENST00000588210 DDI2Q5TDH0 399 aa13.54□□□□□ -0.24
CCDC43-203ENST00000588210 SLC27A4Q6P1M0 643 aa13.54□□□□□ -0.24
CCDC43-203ENST00000588210 FAM131AQ6UXB0 335 aa13.54□□□□□ -0.24
CCDC43-203ENST00000588210 ADCK2Q7Z695 626 aa13.54□□□□□ -0.24
CCDC43-203ENST00000588210 OR56A1Q8NGH5 318 aa13.54□□□□□ -0.24
CCDC43-203ENST00000588210 ZCCHC14Q8WYQ9 949 aaKnown RBP13.54□□□□□ -0.24
CCDC43-203ENST00000588210 SNX18Q96RF0 628 aa13.54□□□□□ -0.24
CCDC43-203ENST00000588210 ARHGDIGQ99819 225 aa13.54□□□□□ -0.24
CCDC43-203ENST00000588210 SLC22A4Q9H015 551 aa13.54□□□□□ -0.24
CCDC43-203ENST00000588210 TPK1Q9H3S4 243 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms