RNA–Protein interactions for RNA: ENST00000584437.5

RNF43-208, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 5,575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-208ENST00000584437 HLA-AP01891 365 aaKnown RBP12.27□□□□□ -0.44
RNF43-208ENST00000584437 GATMP50440 423 aa12.27□□□□□ -0.44
RNF43-208ENST00000584437 HTD2P86397 168 aa12.27□□□□□ -0.44
RNF43-208ENST00000584437 SMN1Q16637 294 aaKnown RBP12.27□□□□□ -0.44
RNF43-208ENST00000584437 SULF2Q8IWU5 870 aa12.27□□□□□ -0.44
RNF43-208ENST00000584437 SDR9C7Q8NEX9 313 aa12.27□□□□□ -0.44
RNF43-208ENST00000584437 CPPED1Q9BRF8 314 aaPredicted RBP12.27□□□□□ -0.44
RNF43-208ENST00000584437 PLCXD1Q9NUJ7 323 aa12.27□□□□□ -0.44
RNF43-208ENST00000584437 ZNF705GA8MUZ8 300 aaPredicted RBP12.27□□□□□ -0.45
RNF43-208ENST00000584437 SNAI1O95863 264 aaPredicted RBP12.27□□□□□ -0.45
RNF43-208ENST00000584437 PDGFAP04085 211 aa12.27□□□□□ -0.45
RNF43-208ENST00000584437 SYN1P17600 705 aa12.27□□□□□ -0.45
RNF43-208ENST00000584437 MC3RP41968 323 aa12.27□□□□□ -0.45
RNF43-208ENST00000584437 ZNF140P52738 457 aaPredicted RBP12.27□□□□□ -0.45
RNF43-208ENST00000584437 P2RY14Q15391 338 aa12.27□□□□□ -0.45
RNF43-208ENST00000584437 SSX2Q16385 188 aa12.27□□□□□ -0.45
RNF43-208ENST00000584437 FCRLBQ6BAA4 426 aa12.27□□□□□ -0.45
RNF43-208ENST00000584437 BOLLQ8N9W6 283 aaKnown RBP12.27□□□□□ -0.45
RNF43-208ENST00000584437 SLC2A12Q8TD20 617 aa12.27□□□□□ -0.45
RNF43-208ENST00000584437 SGIP1Q9BQI5 828 aa12.27□□□□□ -0.45
RNF43-208ENST00000584437 ZNF416Q9BWM5 594 aa12.27□□□□□ -0.45
RNF43-208ENST00000584437 HAPLN2Q9GZV7 340 aa12.27□□□□□ -0.45
RNF43-208ENST00000584437 HRH4Q9H3N8 390 aa12.27□□□□□ -0.45
RNF43-208ENST00000584437 SLCO3A1Q9UIG8 710 aa12.27□□□□□ -0.45
RNF43-208ENST00000584437 RPS10-NUDT3A0A1W2PQS6 291 aa12.27□□□□□ -0.45
RNF43-208ENST00000584437 A6NLC8 198 aa12.27□□□□□ -0.45
RNF43-208ENST00000584437 RFXAPO00287 272 aa12.27□□□□□ -0.45
RNF43-208ENST00000584437 HMGN2P05204 90 aaKnown RBP12.27□□□□□ -0.45
RNF43-208ENST00000584437 MMP2P08253 660 aa12.27□□□□□ -0.45
RNF43-208ENST00000584437 RPS10P46783 165 aaKnown RBP12.27□□□□□ -0.45
RNF43-208ENST00000584437 RPP30P78346 268 aaKnown RBP12.27□□□□□ -0.45
RNF43-208ENST00000584437 LTBQ06643 244 aa12.27□□□□□ -0.45
RNF43-208ENST00000584437 LMF2Q9BU23 707 aaKnown RBP12.27□□□□□ -0.45
RNF43-208ENST00000584437 ST6GALNAC5Q9BVH7 336 aa12.27□□□□□ -0.45
RNF43-208ENST00000584437 CWH43Q9H720 699 aa12.27□□□□□ -0.45
RNF43-208ENST00000584437 PDLIM7Q9NR12 457 aa12.27□□□□□ -0.45
RNF43-208ENST00000584437 SLC22A7Q9Y694 548 aa12.27□□□□□ -0.45
RNF43-208ENST00000584437 ROBO1Q9Y6N7 1651 aa12.27□□□□□ -0.45
RNF43-208ENST00000584437 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.27□□□□□ -0.45
RNF43-208ENST00000584437 A0A1W2PQU0 124 aa12.27□□□□□ -0.45
RNF43-208ENST00000584437 SLC22A23A1A5C7 686 aa12.27□□□□□ -0.45
RNF43-208ENST00000584437 DPM1O60762 260 aa12.27□□□□□ -0.45
RNF43-208ENST00000584437 ZNF43P17038 809 aa12.27□□□□□ -0.45
RNF43-208ENST00000584437 DHPSP49366 369 aaPredicted RBP12.27□□□□□ -0.45
RNF43-208ENST00000584437 FAPQ12884 760 aa12.27□□□□□ -0.45
RNF43-208ENST00000584437 GRM7Q14831 915 aa12.27□□□□□ -0.45
RNF43-208ENST00000584437 ACTBL2Q562R1 376 aa12.27□□□□□ -0.45
RNF43-208ENST00000584437 NHSL2Q5HYW2 709 aa12.27□□□□□ -0.45
RNF43-208ENST00000584437 TCTE1Q5JU00 501 aa12.27□□□□□ -0.45
RNF43-208ENST00000584437 IFNL1Q8IU54 200 aa12.27□□□□□ -0.45
RNF43-208ENST00000584437 APCDD1Q8J025 514 aa12.27□□□□□ -0.45
RNF43-208ENST00000584437 Q8N9G6 341 aaPredicted RBP12.27□□□□□ -0.45
RNF43-208ENST00000584437 TBC1D20Q96BZ9 403 aa12.27□□□□□ -0.45
RNF43-208ENST00000584437 TRMT2BQ96GJ1 504 aaKnown RBP12.27□□□□□ -0.45
RNF43-208ENST00000584437 C5AR2Q9P296 337 aa12.27□□□□□ -0.45
RNF43-208ENST00000584437 ATXN7L1Q9ULK2 861 aaPredicted RBP12.27□□□□□ -0.45
RNF43-208ENST00000584437 A0A1W2PP55 124 aa12.26□□□□□ -0.45
RNF43-208ENST00000584437 HHLA1C9JL84 531 aa12.26□□□□□ -0.45
RNF43-208ENST00000584437 PER3P56645 1201 aa12.26□□□□□ -0.45
RNF43-208ENST00000584437 SORDQ00796 357 aa12.26□□□□□ -0.45
RNF43-208ENST00000584437 TAGLNQ01995 201 aaKnown RBP12.26□□□□□ -0.45
RNF43-208ENST00000584437 ZNF322Q6U7Q0 402 aaPredicted RBP12.26□□□□□ -0.45
RNF43-208ENST00000584437 LYPD4Q6UWN0 246 aa12.26□□□□□ -0.45
RNF43-208ENST00000584437 ARFGAP1Q8N6T3 406 aa12.26□□□□□ -0.45
RNF43-208ENST00000584437 SLC35A3Q9Y2D2 325 aa12.26□□□□□ -0.45
RNF43-208ENST00000584437 CIB4A0PJX0 185 aa12.26□□□□□ -0.45
RNF43-208ENST00000584437 ARAFP10398 606 aa12.26□□□□□ -0.45
RNF43-208ENST00000584437 ETV1P50549 477 aa12.26□□□□□ -0.45
RNF43-208ENST00000584437 HNRNPKP61978 463 aaKnown RBP eCLIP12.26□□□□□ -0.451e-6■■■□□ 18.7
RNF43-208ENST00000584437 TSPAN31Q12999 210 aa12.26□□□□□ -0.45
RNF43-208ENST00000584437 ARHGAP19Q14CB8 494 aa12.26□□□□□ -0.45
RNF43-208ENST00000584437 HENMT1Q5T8I9 393 aaKnown RBP12.26□□□□□ -0.45
RNF43-208ENST00000584437 RAET1LQ5VY80 246 aa12.26□□□□□ -0.45
RNF43-208ENST00000584437 GPR139Q6DWJ6 353 aa12.26□□□□□ -0.45
RNF43-208ENST00000584437 LCN10Q6JVE6 187 aa12.26□□□□□ -0.45
RNF43-208ENST00000584437 BPIFB2Q8N4F0 458 aa12.26□□□□□ -0.45
RNF43-208ENST00000584437 TANKQ92844 425 aa12.26□□□□□ -0.45
RNF43-208ENST00000584437 ZFYVE21Q9BQ24 234 aa12.26□□□□□ -0.45
RNF43-208ENST00000584437 GPR62Q9BZJ7 368 aa12.26□□□□□ -0.45
RNF43-208ENST00000584437 SLC19A3Q9BZV2 496 aa12.26□□□□□ -0.45
RNF43-208ENST00000584437 IGLON5A6NGN9 336 aa12.26□□□□□ -0.45
RNF43-208ENST00000584437 MED6O75586 246 aa12.26□□□□□ -0.45
RNF43-208ENST00000584437 IL4RP24394 825 aa12.26□□□□□ -0.45
RNF43-208ENST00000584437 PSMB10P40306 273 aa12.26□□□□□ -0.45
RNF43-208ENST00000584437 PDZD3Q86UT5 571 aa12.26□□□□□ -0.45
RNF43-208ENST00000584437 ZNF454Q8N9F8 522 aa12.26□□□□□ -0.45
RNF43-208ENST00000584437 HAS2Q92819 552 aa12.26□□□□□ -0.45
RNF43-208ENST00000584437 HRASLS5Q96KN8 279 aa12.26□□□□□ -0.45
RNF43-208ENST00000584437 TESQ9UGI8 421 aaKnown RBP12.26□□□□□ -0.45
RNF43-208ENST00000584437 NENFQ9UMX5 172 aa12.26□□□□□ -0.45
RNF43-208ENST00000584437 CD300LBA8K4G0 201 aa12.26□□□□□ -0.45
RNF43-208ENST00000584437 SLC16A6O15403 523 aa12.26□□□□□ -0.45
RNF43-208ENST00000584437 FABP7O15540 132 aa12.26□□□□□ -0.45
RNF43-208ENST00000584437 HNRNPA1P09651 372 aaKnown RBP eCLIP12.26□□□□□ -0.45
RNF43-208ENST00000584437 DDOSTP39656 456 aa12.26□□□□□ -0.45
RNF43-208ENST00000584437 CD79BP40259 229 aa12.26□□□□□ -0.45
RNF43-208ENST00000584437 MTNR1BP49286 362 aa12.26□□□□□ -0.45
RNF43-208ENST00000584437 SYT6Q5T7P8 510 aaPredicted RBP12.26□□□□□ -0.45
RNF43-208ENST00000584437 PIP5KL1Q5T9C9 394 aa12.26□□□□□ -0.45
RNF43-208ENST00000584437 ALKAL2Q6UX46 152 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms