RNA–Protein interactions for RNA: ENST00000578516.1

CDC42EP4-203, Transcript of CDC42 effector protein 4, humanhuman

TSL 4

Gene CDC42EP4, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-203ENST00000578516 ZNF443Q9Y2A4 671 aaPredicted RBP19.62■□□□□ 0.73
CDC42EP4-203ENST00000578516 ARL2BPQ9Y2Y0 163 aa19.62■□□□□ 0.73
CDC42EP4-203ENST00000578516 ZNF337Q9Y3M9 751 aa19.62■□□□□ 0.73
CDC42EP4-203ENST00000578516 MPDZO75970 2070 aa19.61■□□□□ 0.73
CDC42EP4-203ENST00000578516 A0A1B0GUH1 482 aa19.61■□□□□ 0.73
CDC42EP4-203ENST00000578516 SLC22A2O15244 555 aa19.61■□□□□ 0.73
CDC42EP4-203ENST00000578516 SEC14L5O43304 696 aa19.61■□□□□ 0.73
CDC42EP4-203ENST00000578516 FRS3O43559 492 aa19.61■□□□□ 0.73
CDC42EP4-203ENST00000578516 LINGO3P0C6S8 592 aa19.61■□□□□ 0.73
CDC42EP4-203ENST00000578516 ACVR2AP27037 513 aa19.61■□□□□ 0.73
CDC42EP4-203ENST00000578516 RYKP34925 604 aa19.61■□□□□ 0.73
CDC42EP4-203ENST00000578516 GZMMP51124 257 aa19.61■□□□□ 0.73
CDC42EP4-203ENST00000578516 ZNF41P51814 821 aaPredicted RBP19.61■□□□□ 0.73
CDC42EP4-203ENST00000578516 CLDN15P56746 228 aa19.61■□□□□ 0.73
CDC42EP4-203ENST00000578516 CLDN18P56856 261 aa19.61■□□□□ 0.73
CDC42EP4-203ENST00000578516 CLDN20P56880 219 aa19.61■□□□□ 0.73
CDC42EP4-203ENST00000578516 NUP107P57740 925 aa19.61■□□□□ 0.73
CDC42EP4-203ENST00000578516 KCNJ10P78508 379 aa19.61■□□□□ 0.73
CDC42EP4-203ENST00000578516 SCARB2Q14108 478 aa19.61■□□□□ 0.73
CDC42EP4-203ENST00000578516 GANABQ14697 944 aaKnown RBP19.61■□□□□ 0.73
CDC42EP4-203ENST00000578516 CYP51A1Q16850 503 aa19.61■□□□□ 0.73
CDC42EP4-203ENST00000578516 NHSL2Q5HYW2 709 aa19.61■□□□□ 0.73
CDC42EP4-203ENST00000578516 C1orf185Q5T7R7 199 aa19.61■□□□□ 0.73
CDC42EP4-203ENST00000578516 GPR119Q8TDV5 335 aa19.61■□□□□ 0.73
CDC42EP4-203ENST00000578516 PRDM14Q9GZV8 571 aa19.61■□□□□ 0.73
CDC42EP4-203ENST00000578516 TP63Q9H3D4 680 aaPredicted RBP19.61■□□□□ 0.73
CDC42EP4-203ENST00000578516 KAT8Q9H7Z6 458 aaKnown RBP19.61■□□□□ 0.73
CDC42EP4-203ENST00000578516 ST6GALNAC1Q9NSC7 600 aaPredicted RBP19.61■□□□□ 0.73
CDC42EP4-203ENST00000578516 CACNA1CQ13936 2221 aa19.61■□□□□ 0.73
CDC42EP4-203ENST00000578516 A1L4Q6 167 aa19.6■□□□□ 0.73
CDC42EP4-203ENST00000578516 PGM3O95394 542 aa19.6■□□□□ 0.73
CDC42EP4-203ENST00000578516 GKN3PP0CG01 181 aa19.6■□□□□ 0.73
CDC42EP4-203ENST00000578516 ESRRAP11474 423 aaPredicted RBP19.6■□□□□ 0.73
CDC42EP4-203ENST00000578516 PEPDP12955 493 aa19.6■□□□□ 0.73
CDC42EP4-203ENST00000578516 POU3F2P20265 443 aaPredicted RBP19.6■□□□□ 0.73
CDC42EP4-203ENST00000578516 PSMA4P25789 261 aaKnown RBP19.6■□□□□ 0.73
CDC42EP4-203ENST00000578516 MSX1P28360 303 aa19.6■□□□□ 0.73
CDC42EP4-203ENST00000578516 SUCLG1P53597 346 aaKnown RBP19.6■□□□□ 0.73
CDC42EP4-203ENST00000578516 QPRTQ15274 297 aa19.6■□□□□ 0.73
CDC42EP4-203ENST00000578516 ZNF800Q2TB10 664 aaPredicted RBP eCLIP19.6■□□□□ 0.73
CDC42EP4-203ENST00000578516 ACSF3Q4G176 576 aaPredicted RBP19.6■□□□□ 0.73
CDC42EP4-203ENST00000578516 COQ5Q5HYK3 327 aa19.6■□□□□ 0.73
CDC42EP4-203ENST00000578516 AP1ARQ63HQ0 302 aa19.6■□□□□ 0.73
CDC42EP4-203ENST00000578516 SEM1Q6ZVN7 128 aa19.6■□□□□ 0.73
CDC42EP4-203ENST00000578516 EIF3MQ7L2H7 374 aaKnown RBP19.6■□□□□ 0.73
CDC42EP4-203ENST00000578516 CLIP4Q8N3C7 705 aa19.6■□□□□ 0.73
CDC42EP4-203ENST00000578516 OR5W2Q8NH69 310 aa19.6■□□□□ 0.73
CDC42EP4-203ENST00000578516 RP9Q8TA86 221 aaKnown RBP19.6■□□□□ 0.73
CDC42EP4-203ENST00000578516 SSC4DQ8WTU2 575 aa19.6■□□□□ 0.73
CDC42EP4-203ENST00000578516 TUBA1CQ9BQE3 449 aa19.6■□□□□ 0.73
CDC42EP4-203ENST00000578516 LAT2Q9GZY6 243 aa19.6■□□□□ 0.73
CDC42EP4-203ENST00000578516 MTHFD2LQ9H903 347 aaPredicted RBP19.6■□□□□ 0.73
CDC42EP4-203ENST00000578516 ARL8BQ9NVJ2 186 aa19.6■□□□□ 0.73
CDC42EP4-203ENST00000578516 SUCOQ9UBS9 1254 aaKnown RBP19.6■□□□□ 0.73
CDC42EP4-203ENST00000578516 MRPS18CQ9Y3D5 142 aaKnown RBP19.6■□□□□ 0.73
CDC42EP4-203ENST00000578516 ICE1Q9Y2F5 2266 aa19.6■□□□□ 0.73
CDC42EP4-203ENST00000578516 CCT8L1PA6NM43 557 aa19.59■□□□□ 0.73
CDC42EP4-203ENST00000578516 C5orf58C9J3I9 102 aa19.59■□□□□ 0.73
CDC42EP4-203ENST00000578516 H0Y3Z8 333 aa19.59■□□□□ 0.73
CDC42EP4-203ENST00000578516 EFNA2O43921 213 aa19.59■□□□□ 0.73
CDC42EP4-203ENST00000578516 ACTL6AO96019 429 aa19.59■□□□□ 0.73
CDC42EP4-203ENST00000578516 OPN1SWP03999 348 aa19.59■□□□□ 0.73
CDC42EP4-203ENST00000578516 DBIP07108 87 aaKnown RBP19.59■□□□□ 0.73
CDC42EP4-203ENST00000578516 NID1P14543 1247 aa19.59■□□□□ 0.73
CDC42EP4-203ENST00000578516 IL7RP16871 459 aa19.59■□□□□ 0.73
CDC42EP4-203ENST00000578516 ZNF708P17019 499 aa19.59■□□□□ 0.73
CDC42EP4-203ENST00000578516 PRKCAP17252 672 aa19.59■□□□□ 0.73
CDC42EP4-203ENST00000578516 EEF1A1P68104 462 aaKnown RBP19.59■□□□□ 0.73
CDC42EP4-203ENST00000578516 GLIPR1L2Q4G1C9 344 aa19.59■□□□□ 0.73
CDC42EP4-203ENST00000578516 NET1Q7Z628 596 aaPredicted RBP19.59■□□□□ 0.73
CDC42EP4-203ENST00000578516 PEX5LQ8IYB4 626 aa19.59■□□□□ 0.73
CDC42EP4-203ENST00000578516 FBXO27Q8NI29 283 aa19.59■□□□□ 0.73
CDC42EP4-203ENST00000578516 BBS10Q8TAM1 723 aa19.59■□□□□ 0.73
CDC42EP4-203ENST00000578516 TMEM38AQ9H6F2 299 aa19.59■□□□□ 0.73
CDC42EP4-203ENST00000578516 MRGBPQ9NV56 204 aa19.59■□□□□ 0.73
CDC42EP4-203ENST00000578516 CALML5Q9NZT1 146 aa19.59■□□□□ 0.73
CDC42EP4-203ENST00000578516 CORO2BQ9UQ03 480 aa19.59■□□□□ 0.73
CDC42EP4-203ENST00000578516 A0A0G2JPF8 293 aa19.58■□□□□ 0.72
CDC42EP4-203ENST00000578516 TMEM247A6NEH6 219 aa19.58■□□□□ 0.72
CDC42EP4-203ENST00000578516 FIGNL2A6NMB9 653 aa19.58■□□□□ 0.72
CDC42EP4-203ENST00000578516 HNRNPCL2B2RXH8 293 aa19.58■□□□□ 0.72
CDC42EP4-203ENST00000578516 HNRNPCL3B7ZW38 293 aa19.58■□□□□ 0.72
CDC42EP4-203ENST00000578516 E9PLN8 166 aa19.58■□□□□ 0.72
CDC42EP4-203ENST00000578516 TPST1O60507 370 aa19.58■□□□□ 0.72
CDC42EP4-203ENST00000578516 EIF4E2O60573 245 aaKnown RBP19.58■□□□□ 0.72
CDC42EP4-203ENST00000578516 HNRNPCL1O60812 293 aaKnown RBP19.58■□□□□ 0.72
CDC42EP4-203ENST00000578516 GCM2O75603 506 aaPredicted RBP19.58■□□□□ 0.72
CDC42EP4-203ENST00000578516 EPPINO95925 133 aa19.58■□□□□ 0.72
CDC42EP4-203ENST00000578516 FAM107AO95990 144 aa19.58■□□□□ 0.72
CDC42EP4-203ENST00000578516 HNRNPCL4P0DMR1 293 aa19.58■□□□□ 0.72
CDC42EP4-203ENST00000578516 PRG2P13727 222 aa19.58■□□□□ 0.72
CDC42EP4-203ENST00000578516 SLC6A2P23975 617 aa19.58■□□□□ 0.72
CDC42EP4-203ENST00000578516 CHMP24386 653 aa19.58■□□□□ 0.72
CDC42EP4-203ENST00000578516 ADH7P40394 386 aa19.58■□□□□ 0.72
CDC42EP4-203ENST00000578516 NUDT2P50583 147 aa19.58■□□□□ 0.72
CDC42EP4-203ENST00000578516 SUMO3P55854 103 aaPredicted RBP19.58■□□□□ 0.72
CDC42EP4-203ENST00000578516 POMZP3Q6PJE2 187 aa19.58■□□□□ 0.72
CDC42EP4-203ENST00000578516 GGNQ86UU5 652 aa19.58■□□□□ 0.72
CDC42EP4-203ENST00000578516 GTPBP8Q8N3Z3 284 aaPredicted RBP19.58■□□□□ 0.72
CDC42EP4-203ENST00000578516 ATP6V1C2Q8NEY4 427 aa19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms