RNA–Protein interactions for RNA: ENST00000575599.5

RPAIN-216, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-216ENST00000575599 CACNA1CQ13936 2221 aa11.99□□□□□ -0.49
RPAIN-216ENST00000575599 PCNX3Q9H6A9 2034 aa11.99□□□□□ -0.49
RPAIN-216ENST00000575599 KIAA1549Q9HCM3 1950 aa11.98□□□□□ -0.49
RPAIN-216ENST00000575599 OR2M5A3KFT3 312 aa11.98□□□□□ -0.49
RPAIN-216ENST00000575599 NPIPB9F8W1W9 429 aa11.98□□□□□ -0.49
RPAIN-216ENST00000575599 SEC14L5O43304 696 aa11.98□□□□□ -0.49
RPAIN-216ENST00000575599 FCMRO60667 390 aa11.98□□□□□ -0.49
RPAIN-216ENST00000575599 TOXO94900 526 aa11.98□□□□□ -0.49
RPAIN-216ENST00000575599 NUDT14O95848 222 aa11.98□□□□□ -0.49
RPAIN-216ENST00000575599 NPPAP01160 153 aa11.98□□□□□ -0.49
RPAIN-216ENST00000575599 CPN1P15169 458 aa11.98□□□□□ -0.49
RPAIN-216ENST00000575599 CD1EP15812 388 aa11.98□□□□□ -0.49
RPAIN-216ENST00000575599 MSX1P28360 303 aa11.98□□□□□ -0.49
RPAIN-216ENST00000575599 CLDN18P56856 261 aa11.98□□□□□ -0.49
RPAIN-216ENST00000575599 ZNF117Q03924 483 aa11.98□□□□□ -0.49
RPAIN-216ENST00000575599 FUT5Q11128 374 aa11.98□□□□□ -0.49
RPAIN-216ENST00000575599 GTDC1Q4AE62 458 aa11.98□□□□□ -0.49
RPAIN-216ENST00000575599 DNAL1Q4LDG9 190 aa11.98□□□□□ -0.49
RPAIN-216ENST00000575599 GPAT3Q53EU6 434 aa11.98□□□□□ -0.49
RPAIN-216ENST00000575599 KLHL26Q53HC5 615 aa11.98□□□□□ -0.49
RPAIN-216ENST00000575599 PDZK1Q5T2W1 519 aa11.98□□□□□ -0.49
RPAIN-216ENST00000575599 NSUN5P2Q63ZY6 315 aa11.98□□□□□ -0.49
RPAIN-216ENST00000575599 HEPHL1Q6MZM0 1159 aa11.98□□□□□ -0.49
RPAIN-216ENST00000575599 PLXDC2Q6UX71 529 aa11.98□□□□□ -0.49
RPAIN-216ENST00000575599 DHDDSQ86SQ9 333 aa11.98□□□□□ -0.49
RPAIN-216ENST00000575599 TMCO5AQ8N6Q1 288 aa11.98□□□□□ -0.49
RPAIN-216ENST00000575599 LILRB4Q8NHJ6 448 aa11.98□□□□□ -0.49
RPAIN-216ENST00000575599 ZPLD1Q8TCW7 415 aa11.98□□□□□ -0.49
RPAIN-216ENST00000575599 KLHDC3Q9BQ90 382 aa11.98□□□□□ -0.49
RPAIN-216ENST00000575599 BTBD10Q9BSF8 475 aa11.98□□□□□ -0.49
RPAIN-216ENST00000575599 ZNF350Q9GZX5 532 aa11.98□□□□□ -0.49
RPAIN-216ENST00000575599 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.98□□□□□ -0.49
RPAIN-216ENST00000575599 CARD8Q9Y2G2 431 aa11.98□□□□□ -0.49
RPAIN-216ENST00000575599 ZNF337Q9Y3M9 751 aa11.98□□□□□ -0.49
RPAIN-216ENST00000575599 WDR45Q9Y484 360 aa11.98□□□□□ -0.49
RPAIN-216ENST00000575599 DTNAQ9Y4J8 743 aa11.98□□□□□ -0.49
RPAIN-216ENST00000575599 CENPVL1A0A0U1RR11 272 aa11.97□□□□□ -0.49
RPAIN-216ENST00000575599 CD8B2A6NJW9 211 aa11.97□□□□□ -0.49
RPAIN-216ENST00000575599 CLCA1A8K7I4 914 aa11.97□□□□□ -0.49
RPAIN-216ENST00000575599 HSPB2A8KAH6 182 aa11.97□□□□□ -0.49
RPAIN-216ENST00000575599 GTPBP1O00178 669 aaKnown RBP11.97□□□□□ -0.49
RPAIN-216ENST00000575599 HMGN4O00479 90 aa11.97□□□□□ -0.49
RPAIN-216ENST00000575599 FBP2O00757 339 aa11.97□□□□□ -0.49
RPAIN-216ENST00000575599 OIP5O43482 229 aa11.97□□□□□ -0.49
RPAIN-216ENST00000575599 KRT75O95678 551 aa11.97□□□□□ -0.49
RPAIN-216ENST00000575599 IL2RAP01589 272 aa11.97□□□□□ -0.49
RPAIN-216ENST00000575599 PEPDP12955 493 aa11.97□□□□□ -0.49
RPAIN-216ENST00000575599 ANXA11P50995 505 aaKnown RBP11.97□□□□□ -0.49
RPAIN-216ENST00000575599 CCR4P51679 360 aa11.97□□□□□ -0.49
RPAIN-216ENST00000575599 HSPB2Q16082 182 aa11.97□□□□□ -0.49
RPAIN-216ENST00000575599 TRMT5Q32P41 509 aaKnown RBP11.97□□□□□ -0.49
RPAIN-216ENST00000575599 PAGE3Q5JUK9 113 aa11.97□□□□□ -0.49
RPAIN-216ENST00000575599 COX20Q5RI15 118 aa11.97□□□□□ -0.49
RPAIN-216ENST00000575599 TYW3Q6IPR3 259 aaKnown RBP11.97□□□□□ -0.49
RPAIN-216ENST00000575599 CBLN3Q6UW01 205 aa11.97□□□□□ -0.49
RPAIN-216ENST00000575599 RINLQ6ZS11 566 aa11.97□□□□□ -0.49
RPAIN-216ENST00000575599 HMGN2P46Q86SG4 172 aa11.97□□□□□ -0.49
RPAIN-216ENST00000575599 LIX1LQ8IVB5 337 aa11.97□□□□□ -0.49
RPAIN-216ENST00000575599 DPP10Q8N608 796 aa11.97□□□□□ -0.49
RPAIN-216ENST00000575599 MEIOBQ8N635 442 aa11.97□□□□□ -0.49
RPAIN-216ENST00000575599 NAXEQ8NCW5 288 aa11.97□□□□□ -0.49
RPAIN-216ENST00000575599 ZFP90Q8TF47 636 aa11.97□□□□□ -0.49
RPAIN-216ENST00000575599 MCUR1Q96AQ8 359 aa11.97□□□□□ -0.49
RPAIN-216ENST00000575599 AURKBQ96GD4 344 aaPredicted RBP11.97□□□□□ -0.49
RPAIN-216ENST00000575599 HOPXQ9BPY8 73 aaPredicted RBP11.97□□□□□ -0.49
RPAIN-216ENST00000575599 C1orf21Q9H246 121 aa11.97□□□□□ -0.49
RPAIN-216ENST00000575599 KCNJ16Q9NPI9 418 aa11.97□□□□□ -0.49
RPAIN-216ENST00000575599 MED17Q9NVC6 651 aa11.97□□□□□ -0.49
RPAIN-216ENST00000575599 A0A087WZY1 265 aa11.96□□□□□ -0.49
RPAIN-216ENST00000575599 A0A096LPI6 279 aa11.96□□□□□ -0.49
RPAIN-216ENST00000575599 PRAMEF27A3QJZ7 478 aa11.96□□□□□ -0.49
RPAIN-216ENST00000575599 SERINC4A6NH21 518 aa11.96□□□□□ -0.49
RPAIN-216ENST00000575599 H0YC42 278 aa11.96□□□□□ -0.49
RPAIN-216ENST00000575599 LINC01387J3KSC0 135 aa11.96□□□□□ -0.49
RPAIN-216ENST00000575599 KIAA0513O60268 411 aa11.96□□□□□ -0.49
RPAIN-216ENST00000575599 UGT2B17O75795 530 aa11.96□□□□□ -0.49
RPAIN-216ENST00000575599 CYP7B1O75881 506 aa11.96□□□□□ -0.49
RPAIN-216ENST00000575599 H6PDO95479 791 aa11.96□□□□□ -0.49
RPAIN-216ENST00000575599 UBL4AP11441 157 aa11.96□□□□□ -0.49
RPAIN-216ENST00000575599 COX6B1P14854 86 aa11.96□□□□□ -0.49
RPAIN-216ENST00000575599 ZNF17P17021 662 aa11.96□□□□□ -0.49
RPAIN-216ENST00000575599 BMP5P22003 454 aa11.96□□□□□ -0.49
RPAIN-216ENST00000575599 TIMP3P35625 211 aa11.96□□□□□ -0.49
RPAIN-216ENST00000575599 P2RX1P51575 399 aa11.96□□□□□ -0.49
RPAIN-216ENST00000575599 TPD52P55327 224 aaPredicted RBP11.96□□□□□ -0.49
RPAIN-216ENST00000575599 SLC25A3Q00325 362 aa11.96□□□□□ -0.49
RPAIN-216ENST00000575599 PLPPR5Q32ZL2 321 aa11.96□□□□□ -0.49
RPAIN-216ENST00000575599 GLYR1Q49A26 553 aaPredicted RBP11.96□□□□□ -0.49
RPAIN-216ENST00000575599 HACD2Q6Y1H2 254 aa11.96□□□□□ -0.49
RPAIN-216ENST00000575599 FRRS1Q6ZNA5 592 aa11.96□□□□□ -0.49
RPAIN-216ENST00000575599 CHMP1BQ7LBR1 199 aa11.96□□□□□ -0.49
RPAIN-216ENST00000575599 RETREG3Q86VR2 466 aa11.96□□□□□ -0.49
RPAIN-216ENST00000575599 GRAMD2AQ8IUY3 354 aa11.96□□□□□ -0.49
RPAIN-216ENST00000575599 ARHGAP24Q8N264 748 aa11.96□□□□□ -0.49
RPAIN-216ENST00000575599 ZNF619Q8N2I2 560 aa11.96□□□□□ -0.49
RPAIN-216ENST00000575599 ANKFN1Q8N957 763 aa11.96□□□□□ -0.49
RPAIN-216ENST00000575599 C9orf106Q8NAJ2 232 aa11.96□□□□□ -0.49
RPAIN-216ENST00000575599 RBM15BQ8NDT2 890 aaKnown RBP11.96□□□□□ -0.49
RPAIN-216ENST00000575599 GTF2H4Q92759 462 aa11.96□□□□□ -0.49
RPAIN-216ENST00000575599 ZBTB8AQ96BR9 441 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms