RNA–Protein interactions for RNA: ENST00000573936.5

CHD3-216, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-216ENST00000573936 SH3YL1Q96HL8 342 aaPredicted RBP10□□□□□ -0.81
CHD3-216ENST00000573936 SFXN2Q96NB2 322 aa10□□□□□ -0.81
CHD3-216ENST00000573936 LRRC37BQ96QE4 947 aa10□□□□□ -0.81
CHD3-216ENST00000573936 TIMP4Q99727 224 aa10□□□□□ -0.81
CHD3-216ENST00000573936 VKORC1Q9BQB6 163 aa10□□□□□ -0.81
CHD3-216ENST00000573936 SPATA9Q9BWV2 254 aa10□□□□□ -0.81
CHD3-216ENST00000573936 UGT2B28Q9BY64 529 aa10□□□□□ -0.81
CHD3-216ENST00000573936 TMEM38AQ9H6F2 299 aa10□□□□□ -0.81
CHD3-216ENST00000573936 BCL2L10Q9HD36 194 aa10□□□□□ -0.81
CHD3-216ENST00000573936 SPRR3Q9UBC9 169 aa10□□□□□ -0.81
CHD3-216ENST00000573936 KCNE5Q9UJ90 142 aa10□□□□□ -0.81
CHD3-216ENST00000573936 CARD8Q9Y2G2 431 aa10□□□□□ -0.81
CHD3-216ENST00000573936 RPH3AQ9Y2J0 694 aaPredicted RBP10□□□□□ -0.81
CHD3-216ENST00000573936 AP3M1Q9Y2T2 418 aa10□□□□□ -0.81
CHD3-216ENST00000573936 SLC6A5Q9Y345 797 aa10□□□□□ -0.81
CHD3-216ENST00000573936 HRH3Q9Y5N1 445 aa10□□□□□ -0.81
CHD3-216ENST00000573936 EML6Q6ZMW3 1958 aa10□□□□□ -0.81
CHD3-216ENST00000573936 FBN2P35556 2912 aa10□□□□□ -0.81
CHD3-216ENST00000573936 NUP214P35658 2090 aaPredicted RBP10□□□□□ -0.81
CHD3-216ENST00000573936 ZGRF1Q86YA3 2104 aa10□□□□□ -0.81
CHD3-216ENST00000573936 AKAP9Q99996 3911 aa10□□□□□ -0.81
CHD3-216ENST00000573936 C17orf51A8MQB3 221 aa9.99□□□□□ -0.81
CHD3-216ENST00000573936 CYP7B1O75881 506 aa9.99□□□□□ -0.81
CHD3-216ENST00000573936 PGM3O95394 542 aa9.99□□□□□ -0.81
CHD3-216ENST00000573936 NUDT14O95848 222 aa9.99□□□□□ -0.81
CHD3-216ENST00000573936 THBS1P07996 1170 aa9.99□□□□□ -0.81
CHD3-216ENST00000573936 PEPDP12955 493 aa9.99□□□□□ -0.81
CHD3-216ENST00000573936 NID1P14543 1247 aa9.99□□□□□ -0.81
CHD3-216ENST00000573936 CPN1P15169 458 aa9.99□□□□□ -0.81
CHD3-216ENST00000573936 PGCP20142 388 aa9.99□□□□□ -0.81
CHD3-216ENST00000573936 RPS4Y1P22090 263 aaKnown RBP9.99□□□□□ -0.81
CHD3-216ENST00000573936 ADH6P28332 368 aa9.99□□□□□ -0.81
CHD3-216ENST00000573936 EIF1P41567 113 aaKnown RBP9.99□□□□□ -0.81
CHD3-216ENST00000573936 SLC6A8P48029 635 aa9.99□□□□□ -0.81
CHD3-216ENST00000573936 EEFSECP57772 596 aaKnown RBP9.99□□□□□ -0.81
CHD3-216ENST00000573936 CDK6Q00534 326 aa9.99□□□□□ -0.81
CHD3-216ENST00000573936 ZNF117Q03924 483 aa9.99□□□□□ -0.81
CHD3-216ENST00000573936 LARS2Q15031 903 aaKnown RBP9.99□□□□□ -0.81
CHD3-216ENST00000573936 MAPK14Q16539 360 aa9.99□□□□□ -0.81
CHD3-216ENST00000573936 BCL2A1Q16548 175 aa9.99□□□□□ -0.81
CHD3-216ENST00000573936 RAET1LQ5VY80 246 aa9.99□□□□□ -0.81
CHD3-216ENST00000573936 FAM91A1Q658Y4 838 aa9.99□□□□□ -0.81
CHD3-216ENST00000573936 NANOGP8Q6NSW7 305 aa9.99□□□□□ -0.81
CHD3-216ENST00000573936 REEP3Q6NUK4 255 aa9.99□□□□□ -0.81
CHD3-216ENST00000573936 ZNF585AQ6P3V2 769 aa9.99□□□□□ -0.81
CHD3-216ENST00000573936 OLIG3Q7RTU3 272 aa9.99□□□□□ -0.81
CHD3-216ENST00000573936 SERPINA11Q86U17 422 aa9.99□□□□□ -0.81
CHD3-216ENST00000573936 KRT73Q86Y46 540 aa9.99□□□□□ -0.81
CHD3-216ENST00000573936 ZNF440Q8IYI8 595 aa9.99□□□□□ -0.81
CHD3-216ENST00000573936 TMCO5AQ8N6Q1 288 aa9.99□□□□□ -0.81
CHD3-216ENST00000573936 HIPK4Q8NE63 616 aa9.99□□□□□ -0.81
CHD3-216ENST00000573936 OR5M9Q8NGP3 310 aa9.99□□□□□ -0.81
CHD3-216ENST00000573936 OR52P1PQ8NH57 321 aa9.99□□□□□ -0.81
CHD3-216ENST00000573936 PHF10Q8WUB8 498 aaKnown RBP9.99□□□□□ -0.81
CHD3-216ENST00000573936 ZG16BQ96DA0 208 aa9.99□□□□□ -0.81
CHD3-216ENST00000573936 ARSGQ96EG1 525 aa9.99□□□□□ -0.81
CHD3-216ENST00000573936 ZNF607Q96SK3 696 aa9.99□□□□□ -0.81
CHD3-216ENST00000573936 HOPXQ9BPY8 73 aaPredicted RBP9.99□□□□□ -0.81
CHD3-216ENST00000573936 TREX2Q9BQ50 279 aaPredicted RBP9.99□□□□□ -0.81
CHD3-216ENST00000573936 SPATA5L1Q9BVQ7 753 aa9.99□□□□□ -0.81
CHD3-216ENST00000573936 PRDM14Q9GZV8 571 aa9.99□□□□□ -0.81
CHD3-216ENST00000573936 NANOGQ9H9S0 305 aa9.99□□□□□ -0.81
CHD3-216ENST00000573936 EFCAB1Q9HAE3 211 aa9.99□□□□□ -0.81
CHD3-216ENST00000573936 EXOSC3Q9NQT5 275 aaKnown RBP9.99□□□□□ -0.81
CHD3-216ENST00000573936 PNPLA3Q9NST1 481 aa9.99□□□□□ -0.81
CHD3-216ENST00000573936 MED17Q9NVC6 651 aa9.99□□□□□ -0.81
CHD3-216ENST00000573936 ALKBH4Q9NXW9 302 aa9.99□□□□□ -0.81
CHD3-216ENST00000573936 SH3BGRL2Q9UJC5 107 aa9.99□□□□□ -0.81
CHD3-216ENST00000573936 TINAGQ9UJW2 476 aa9.99□□□□□ -0.81
CHD3-216ENST00000573936 ICAM5Q9UMF0 924 aa9.99□□□□□ -0.81
CHD3-216ENST00000573936 CAMK2AQ9UQM7 478 aa9.99□□□□□ -0.81
CHD3-216ENST00000573936 ANGPT4Q9Y264 503 aa9.99□□□□□ -0.81
CHD3-216ENST00000573936 MEMO1Q9Y316 297 aa9.99□□□□□ -0.81
CHD3-216ENST00000573936 L3MBTL1Q9Y468 752 aa9.99□□□□□ -0.81
CHD3-216ENST00000573936 AP4B1Q9Y6B7 739 aa9.99□□□□□ -0.81
CHD3-216ENST00000573936 DSPPQ9NZW4 1301 aa9.99□□□□□ -0.81
CHD3-216ENST00000573936 ITPR3Q14573 2671 aa9.98□□□□□ -0.81
CHD3-216ENST00000573936 ADGRG4Q8IZF6 3080 aa9.98□□□□□ -0.81
CHD3-216ENST00000573936 C7orf72A4D263 438 aa9.98□□□□□ -0.81
CHD3-216ENST00000573936 B4DXG7 233 aa9.98□□□□□ -0.81
CHD3-216ENST00000573936 ZNHIT1O43257 154 aa9.98□□□□□ -0.81
CHD3-216ENST00000573936 GMFGO60234 142 aa9.98□□□□□ -0.81
CHD3-216ENST00000573936 NUDT7P0C024 238 aa9.98□□□□□ -0.81
CHD3-216ENST00000573936 UBTFL6P0CB48 400 aaPredicted RBP9.98□□□□□ -0.81
CHD3-216ENST00000573936 ETS2P15036 469 aa9.98□□□□□ -0.81
CHD3-216ENST00000573936 POU3F2P20265 443 aaPredicted RBP9.98□□□□□ -0.81
CHD3-216ENST00000573936 ACVR2AP27037 513 aa9.98□□□□□ -0.81
CHD3-216ENST00000573936 PGM1P36871 562 aa9.98□□□□□ -0.81
CHD3-216ENST00000573936 SMSP52788 366 aa9.98□□□□□ -0.81
CHD3-216ENST00000573936 MTPNP58546 118 aa9.98□□□□□ -0.81
CHD3-216ENST00000573936 ART3Q13508 389 aa9.98□□□□□ -0.81
CHD3-216ENST00000573936 SCARB2Q14108 478 aa9.98□□□□□ -0.81
CHD3-216ENST00000573936 CAPRIN1Q14444 709 aaKnown RBP9.98□□□□□ -0.81
CHD3-216ENST00000573936 MAPK11Q15759 364 aa9.98□□□□□ -0.81
CHD3-216ENST00000573936 CYP51A1Q16850 503 aa9.98□□□□□ -0.81
CHD3-216ENST00000573936 PLPPR5Q32ZL2 321 aa9.98□□□□□ -0.81
CHD3-216ENST00000573936 EMC4Q5J8M3 183 aa9.98□□□□□ -0.81
CHD3-216ENST00000573936 SP5Q6BEB4 398 aaPredicted RBP9.98□□□□□ -0.81
CHD3-216ENST00000573936 CBLN3Q6UW01 205 aa9.98□□□□□ -0.81
CHD3-216ENST00000573936 ARSKQ6UWY0 536 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms