RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 NDUFAF6Q330K2 333 aa12.08□□□□□ -0.48
CCDC40-205ENST00000571028 PDZK1Q5T2W1 519 aa12.08□□□□□ -0.48
CCDC40-205ENST00000571028 HEPHL1Q6MZM0 1159 aa12.08□□□□□ -0.48
CCDC40-205ENST00000571028 NANOGP8Q6NSW7 305 aa12.08□□□□□ -0.48
CCDC40-205ENST00000571028 ZNF585AQ6P3V2 769 aa12.08□□□□□ -0.48
CCDC40-205ENST00000571028 B3GNT6Q6ZMB0 384 aa12.08□□□□□ -0.48
CCDC40-205ENST00000571028 CXXC5Q7LFL8 322 aaKnown RBP12.08□□□□□ -0.48
CCDC40-205ENST00000571028 SLC22A16Q86VW1 577 aa12.08□□□□□ -0.48
CCDC40-205ENST00000571028 ZNF527Q8NB42 609 aa12.08□□□□□ -0.48
CCDC40-205ENST00000571028 ZFP62Q8NB50 900 aaPredicted RBP12.08□□□□□ -0.48
CCDC40-205ENST00000571028 OR4K17Q8NGC6 315 aa12.08□□□□□ -0.48
CCDC40-205ENST00000571028 OR10A6Q8NH74 314 aa12.08□□□□□ -0.48
CCDC40-205ENST00000571028 NFKBIDQ8NI38 313 aa12.08□□□□□ -0.48
CCDC40-205ENST00000571028 PHOSPHO1Q8TCT1 267 aa12.08□□□□□ -0.48
CCDC40-205ENST00000571028 LRRC46Q96FV0 321 aa12.08□□□□□ -0.48
CCDC40-205ENST00000571028 TMEM19Q96HH6 336 aa12.08□□□□□ -0.48
CCDC40-205ENST00000571028 SH3YL1Q96HL8 342 aaPredicted RBP12.08□□□□□ -0.48
CCDC40-205ENST00000571028 ZNF350Q9GZX5 532 aa12.08□□□□□ -0.48
CCDC40-205ENST00000571028 HOXD1Q9GZZ0 328 aa12.08□□□□□ -0.48
CCDC40-205ENST00000571028 DSN1Q9H410 356 aa12.08□□□□□ -0.48
CCDC40-205ENST00000571028 LDAHQ9H6V9 325 aa12.08□□□□□ -0.48
CCDC40-205ENST00000571028 NANOGQ9H9S0 305 aa12.08□□□□□ -0.48
CCDC40-205ENST00000571028 EFCAB1Q9HAE3 211 aa12.08□□□□□ -0.48
CCDC40-205ENST00000571028 MED11Q9P086 117 aa12.08□□□□□ -0.48
CCDC40-205ENST00000571028 TAGLN3Q9UI15 199 aa12.08□□□□□ -0.48
CCDC40-205ENST00000571028 CORO2BQ9UQ03 480 aa12.08□□□□□ -0.48
CCDC40-205ENST00000571028 LIPT1Q9Y234 373 aa12.08□□□□□ -0.48
CCDC40-205ENST00000571028 CENPVL1A0A0U1RR11 272 aa12.07□□□□□ -0.48
CCDC40-205ENST00000571028 A6NNC1 897 aa12.07□□□□□ -0.48
CCDC40-205ENST00000571028 SNPHO15079 494 aa12.07□□□□□ -0.48
CCDC40-205ENST00000571028 TNFRSF21O75509 655 aa12.07□□□□□ -0.48
CCDC40-205ENST00000571028 GPX2P18283 190 aa12.07□□□□□ -0.48
CCDC40-205ENST00000571028 TBXA2RP21731 343 aa12.07□□□□□ -0.48
CCDC40-205ENST00000571028 PCSK6P29122 969 aa12.07□□□□□ -0.48
CCDC40-205ENST00000571028 PRDX6P30041 224 aa12.07□□□□□ -0.48
CCDC40-205ENST00000571028 LCN1P31025 176 aa12.07□□□□□ -0.48
CCDC40-205ENST00000571028 UQCRC1P31930 480 aa12.07□□□□□ -0.48
CCDC40-205ENST00000571028 DLX5P56178 289 aa12.07□□□□□ -0.48
CCDC40-205ENST00000571028 FADDQ13158 208 aa12.07□□□□□ -0.48
CCDC40-205ENST00000571028 SNTB1Q13884 538 aaKnown RBP12.07□□□□□ -0.48
CCDC40-205ENST00000571028 CD226Q15762 336 aa12.07□□□□□ -0.48
CCDC40-205ENST00000571028 SLC25A35Q3KQZ1 300 aa12.07□□□□□ -0.48
CCDC40-205ENST00000571028 COQ5Q5HYK3 327 aa12.07□□□□□ -0.48
CCDC40-205ENST00000571028 FNDC7Q5VTL7 733 aa12.07□□□□□ -0.48
CCDC40-205ENST00000571028 TIGD3Q6B0B8 471 aa12.07□□□□□ -0.48
CCDC40-205ENST00000571028 TYW3Q6IPR3 259 aaKnown RBP12.07□□□□□ -0.48
CCDC40-205ENST00000571028 FRRS1Q6ZNA5 592 aa12.07□□□□□ -0.48
CCDC40-205ENST00000571028 PRIMA1Q86XR5 153 aa12.07□□□□□ -0.48
CCDC40-205ENST00000571028 ZNF619Q8N2I2 560 aa12.07□□□□□ -0.48
CCDC40-205ENST00000571028 FITM2Q8N6M3 262 aa12.07□□□□□ -0.48
CCDC40-205ENST00000571028 OR5M9Q8NGP3 310 aa12.07□□□□□ -0.48
CCDC40-205ENST00000571028 SLC38A5Q8WUX1 472 aa12.07□□□□□ -0.48
CCDC40-205ENST00000571028 ZG16BQ96DA0 208 aa12.07□□□□□ -0.48
CCDC40-205ENST00000571028 TMEM41AQ96HV5 264 aa12.07□□□□□ -0.48
CCDC40-205ENST00000571028 TRNT1Q96Q11 434 aaKnown RBP12.07□□□□□ -0.48
CCDC40-205ENST00000571028 ECSITQ9BQ95 431 aa12.07□□□□□ -0.48
CCDC40-205ENST00000571028 CRIM1Q9NZV1 1036 aa12.07□□□□□ -0.48
CCDC40-205ENST00000571028 B4GALT7Q9UBV7 327 aa12.07□□□□□ -0.48
CCDC40-205ENST00000571028 KCNE5Q9UJ90 142 aa12.07□□□□□ -0.48
CCDC40-205ENST00000571028 FBXL2Q9UKC9 423 aa12.07□□□□□ -0.48
CCDC40-205ENST00000571028 ABCG2Q9UNQ0 655 aa12.07□□□□□ -0.48
CCDC40-205ENST00000571028 ALG1L2C9J202 215 aa12.06□□□□□ -0.48
CCDC40-205ENST00000571028 FAM47E-STBD1D6RA91 191 aa12.06□□□□□ -0.48
CCDC40-205ENST00000571028 H3BNH8 94 aa12.06□□□□□ -0.48
CCDC40-205ENST00000571028 FXYD1O00168 92 aa12.06□□□□□ -0.48
CCDC40-205ENST00000571028 BCKDKO14874 412 aa12.06□□□□□ -0.48
CCDC40-205ENST00000571028 TFPTP0C1Z6 253 aa12.06□□□□□ -0.48
CCDC40-205ENST00000571028 AQP1P29972 269 aa12.06□□□□□ -0.48
CCDC40-205ENST00000571028 MAGEA8P43361 318 aa12.06□□□□□ -0.48
CCDC40-205ENST00000571028 CCR4P51679 360 aa12.06□□□□□ -0.48
CCDC40-205ENST00000571028 CRISP3P54108 245 aa12.06□□□□□ -0.48
CCDC40-205ENST00000571028 GAS1P54826 345 aa12.06□□□□□ -0.48
CCDC40-205ENST00000571028 CBX1P83916 185 aa12.06□□□□□ -0.48
CCDC40-205ENST00000571028 CDK6Q00534 326 aa12.06□□□□□ -0.48
CCDC40-205ENST00000571028 SCARB2Q14108 478 aa12.06□□□□□ -0.48
CCDC40-205ENST00000571028 MAPK11Q15759 364 aa12.06□□□□□ -0.48
CCDC40-205ENST00000571028 MAPK14Q16539 360 aa12.06□□□□□ -0.48
CCDC40-205ENST00000571028 GXYLT1Q4G148 440 aa12.06□□□□□ -0.48
CCDC40-205ENST00000571028 EMC4Q5J8M3 183 aa12.06□□□□□ -0.48
CCDC40-205ENST00000571028 WIPI1Q5MNZ9 446 aaPredicted RBP12.06□□□□□ -0.48
CCDC40-205ENST00000571028 LRRC74BQ6ZQY2 392 aa12.06□□□□□ -0.48
CCDC40-205ENST00000571028 YRDCQ86U90 279 aaKnown RBP12.06□□□□□ -0.48
CCDC40-205ENST00000571028 IFNEQ86WN2 208 aa12.06□□□□□ -0.48
CCDC40-205ENST00000571028 PLCZ1Q86YW0 608 aa12.06□□□□□ -0.48
CCDC40-205ENST00000571028 FAM109AQ8N4B1 249 aa12.06□□□□□ -0.48
CCDC40-205ENST00000571028 TMCO5AQ8N6Q1 288 aa12.06□□□□□ -0.48
CCDC40-205ENST00000571028 WDSUB1Q8N9V3 476 aa12.06□□□□□ -0.48
CCDC40-205ENST00000571028 ARSGQ96EG1 525 aa12.06□□□□□ -0.48
CCDC40-205ENST00000571028 SH3GL1Q99961 368 aa12.06□□□□□ -0.48
CCDC40-205ENST00000571028 TTYH2Q9BSA4 534 aa12.06□□□□□ -0.48
CCDC40-205ENST00000571028 SLC38A1Q9H2H9 487 aa12.06□□□□□ -0.48
CCDC40-205ENST00000571028 SLC6A15Q9H2J7 730 aa12.06□□□□□ -0.48
CCDC40-205ENST00000571028 CACYBPQ9HB71 228 aaKnown RBP12.06□□□□□ -0.48
CCDC40-205ENST00000571028 A4GALTQ9NPC4 353 aa12.06□□□□□ -0.48
CCDC40-205ENST00000571028 POLE3Q9NRF9 147 aa12.06□□□□□ -0.48
CCDC40-205ENST00000571028 PLSCR2Q9NRY7 297 aa12.06□□□□□ -0.48
CCDC40-205ENST00000571028 PNPLA3Q9NST1 481 aa12.06□□□□□ -0.48
CCDC40-205ENST00000571028 THUMPD1Q9NXG2 353 aaKnown RBP12.06□□□□□ -0.48
CCDC40-205ENST00000571028 DKKL1Q9UK85 242 aa12.06□□□□□ -0.48
CCDC40-205ENST00000571028 USP22Q9UPT9 525 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms