RNA–Protein interactions for RNA: ENST00000563201.1

TNRC6A-210, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 3

Gene TNRC6A, Length 276 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-210ENST00000563201 RPS10P5Q9NQ39 176 aa1.35□□□□□ -2.19
TNRC6A-210ENST00000563201 GDF3Q9NR23 364 aa1.35□□□□□ -2.19
TNRC6A-210ENST00000563201 HOMER3Q9NSC5 361 aa1.35□□□□□ -2.19
TNRC6A-210ENST00000563201 EIF3KQ9UBQ5 218 aaKnown RBP1.35□□□□□ -2.19
TNRC6A-210ENST00000563201 MMP17Q9ULZ9 603 aa1.35□□□□□ -2.19
TNRC6A-210ENST00000563201 STX8Q9UNK0 236 aa1.35□□□□□ -2.19
TNRC6A-210ENST00000563201 SMC3Q9UQE7 1217 aa1.35□□□□□ -2.19
TNRC6A-210ENST00000563201 ENTPD4Q9Y227 616 aa1.35□□□□□ -2.19
TNRC6A-210ENST00000563201 PIN4Q9Y237 131 aaKnown RBP1.35□□□□□ -2.19
TNRC6A-210ENST00000563201 SLC9A8Q9Y2E8 581 aa1.35□□□□□ -2.19
TNRC6A-210ENST00000563201 TMED7Q9Y3B3 224 aa1.35□□□□□ -2.19
TNRC6A-210ENST00000563201 SF3B1O75533 1304 aaKnown RBP eCLIP1.35□□□□□ -2.19
TNRC6A-210ENST00000563201 ZBED9Q6R2W3 1325 aa1.35□□□□□ -2.19
TNRC6A-210ENST00000563201 ZNF532Q9HCE3 1301 aa1.35□□□□□ -2.19
TNRC6A-210ENST00000563201 FANCIQ9NVI1 1328 aa1.35□□□□□ -2.19
TNRC6A-210ENST00000563201 ARID1AO14497 2285 aa1.35□□□□□ -2.19
TNRC6A-210ENST00000563201 ARHGAP21Q5T5U3 1957 aa1.34□□□□□ -2.19
TNRC6A-210ENST00000563201 USF3Q68DE3 2245 aa1.34□□□□□ -2.19
TNRC6A-210ENST00000563201 ANK3Q12955 4377 aaKnown RBP1.34□□□□□ -2.19
TNRC6A-210ENST00000563201 A0A087WWV3 80 aa1.34□□□□□ -2.19
TNRC6A-210ENST00000563201 IGHV1OR15-9A0A0B4J2B8 117 aa1.34□□□□□ -2.19
TNRC6A-210ENST00000563201 A0A0U1RQK1 487 aa1.34□□□□□ -2.19
TNRC6A-210ENST00000563201 ZNF320A2RRD8 509 aa1.34□□□□□ -2.19
TNRC6A-210ENST00000563201 ZNF840PA6NDX5 716 aa1.34□□□□□ -2.19
TNRC6A-210ENST00000563201 A8MU76 341 aa1.34□□□□□ -2.19
TNRC6A-210ENST00000563201 SHISA9B4DS77 424 aa1.34□□□□□ -2.19
TNRC6A-210ENST00000563201 K7EQG2 157 aa1.34□□□□□ -2.19
TNRC6A-210ENST00000563201 SGK1O00141 431 aa1.34□□□□□ -2.19
TNRC6A-210ENST00000563201 EEF2KO00418 725 aaKnown RBP1.34□□□□□ -2.19
TNRC6A-210ENST00000563201 E2F3O00716 465 aa1.34□□□□□ -2.19
TNRC6A-210ENST00000563201 MCF2LO15068 1137 aa1.34□□□□□ -2.19
TNRC6A-210ENST00000563201 TTI1O43156 1089 aa1.34□□□□□ -2.19
TNRC6A-210ENST00000563201 ADAM12O43184 909 aa1.34□□□□□ -2.19
TNRC6A-210ENST00000563201 BUB1O43683 1085 aa1.34□□□□□ -2.19
TNRC6A-210ENST00000563201 PRKAB2O43741 272 aa1.34□□□□□ -2.19
TNRC6A-210ENST00000563201 NME2P1O60361 137 aa1.34□□□□□ -2.19
TNRC6A-210ENST00000563201 HSF2BPO75031 334 aa1.34□□□□□ -2.19
TNRC6A-210ENST00000563201 KLF8O95600 359 aaPredicted RBP1.34□□□□□ -2.19
TNRC6A-210ENST00000563201 CPNE6O95741 557 aa1.34□□□□□ -2.19
TNRC6A-210ENST00000563201 LDOC1O95751 146 aaPredicted RBP1.34□□□□□ -2.19
TNRC6A-210ENST00000563201 PNPP00491 289 aa1.34□□□□□ -2.19
TNRC6A-210ENST00000563201 GOT2P00505 430 aaKnown RBP1.34□□□□□ -2.19
TNRC6A-210ENST00000563201 RENP00797 406 aa1.34□□□□□ -2.19
TNRC6A-210ENST00000563201 FCER2P06734 321 aa1.34□□□□□ -2.19
TNRC6A-210ENST00000563201 FHP07954 510 aa1.34□□□□□ -2.19
TNRC6A-210ENST00000563201 UBTFL1P0CB47 393 aaPredicted RBP1.34□□□□□ -2.19
TNRC6A-210ENST00000563201 UROSP10746 265 aa1.34□□□□□ -2.19
TNRC6A-210ENST00000563201 ODC1P11926 461 aa1.34□□□□□ -2.19
TNRC6A-210ENST00000563201 P4HA1P13674 534 aa1.34□□□□□ -2.19
TNRC6A-210ENST00000563201 ATP6V1B1P15313 513 aa1.34□□□□□ -2.19
TNRC6A-210ENST00000563201 KLK2P20151 261 aa1.34□□□□□ -2.19
TNRC6A-210ENST00000563201 GLRA1P23415 457 aa1.34□□□□□ -2.19
TNRC6A-210ENST00000563201 CCND2P30279 289 aa1.34□□□□□ -2.19
TNRC6A-210ENST00000563201 ETV5P41161 510 aa1.34□□□□□ -2.19
TNRC6A-210ENST00000563201 CASP3P42574 277 aa1.34□□□□□ -2.19
TNRC6A-210ENST00000563201 TNNT3P45378 269 aaPredicted RBP1.34□□□□□ -2.19
TNRC6A-210ENST00000563201 NSFP46459 744 aaKnown RBP1.34□□□□□ -2.19
TNRC6A-210ENST00000563201 RGRP47804 291 aa1.34□□□□□ -2.19
TNRC6A-210ENST00000563201 QARSP47897 775 aaKnown RBP1.34□□□□□ -2.19
TNRC6A-210ENST00000563201 NDST1P52848 882 aa1.34□□□□□ -2.19
TNRC6A-210ENST00000563201 METAP1P53582 386 aa1.34□□□□□ -2.19
TNRC6A-210ENST00000563201 PEX3P56589 373 aa1.34□□□□□ -2.19
TNRC6A-210ENST00000563201 KIAA1024LP59773 190 aa1.34□□□□□ -2.19
TNRC6A-210ENST00000563201 CD300CQ08708 224 aa1.34□□□□□ -2.19
TNRC6A-210ENST00000563201 COX10Q12887 443 aa1.34□□□□□ -2.19
TNRC6A-210ENST00000563201 KLRB1Q12918 225 aa1.34□□□□□ -2.19
TNRC6A-210ENST00000563201 BNIP1Q12981 228 aa1.34□□□□□ -2.19
TNRC6A-210ENST00000563201 SLC17A1Q14916 467 aa1.34□□□□□ -2.19
TNRC6A-210ENST00000563201 HEPACAMQ14CZ8 416 aa1.34□□□□□ -2.19
TNRC6A-210ENST00000563201 WDR43Q15061 677 aaKnown RBP eCLIP1.34□□□□□ -2.19
TNRC6A-210ENST00000563201 SIX1Q15475 284 aaPredicted RBP1.34□□□□□ -2.19
TNRC6A-210ENST00000563201 TGIF1Q15583 401 aa1.34□□□□□ -2.19
TNRC6A-210ENST00000563201 CDC37Q16543 378 aaPredicted RBP1.34□□□□□ -2.19
TNRC6A-210ENST00000563201 EIPR1Q53HC9 387 aa1.34□□□□□ -2.19
TNRC6A-210ENST00000563201 LBHQ53QV2 105 aaPredicted RBP1.34□□□□□ -2.19
TNRC6A-210ENST00000563201 PRR30Q53SZ7 412 aaPredicted RBP1.34□□□□□ -2.19
TNRC6A-210ENST00000563201 C12orf60Q5U649 245 aa1.34□□□□□ -2.19
TNRC6A-210ENST00000563201 TAF3Q5VWG9 929 aa1.34□□□□□ -2.19
TNRC6A-210ENST00000563201 RTL6Q6ICC9 239 aa1.34□□□□□ -2.19
TNRC6A-210ENST00000563201 IYDQ6PHW0 289 aa1.34□□□□□ -2.19
TNRC6A-210ENST00000563201 C2orf66Q6UXQ4 117 aa1.34□□□□□ -2.19
TNRC6A-210ENST00000563201 HSCBQ8IWL3 235 aa1.34□□□□□ -2.19
TNRC6A-210ENST00000563201 ZC3H3Q8IXZ2 948 aaKnown RBP1.34□□□□□ -2.19
TNRC6A-210ENST00000563201 SYCP3Q8IZU3 236 aa1.34□□□□□ -2.19
TNRC6A-210ENST00000563201 NUP93Q8N1F7 819 aa1.34□□□□□ -2.19
TNRC6A-210ENST00000563201 CADM2Q8N3J6 435 aa1.34□□□□□ -2.19
TNRC6A-210ENST00000563201 FBXW8Q8N3Y1 598 aa1.34□□□□□ -2.19
TNRC6A-210ENST00000563201 ALLCQ8N6M5 410 aa1.34□□□□□ -2.19
TNRC6A-210ENST00000563201 METTL13Q8N6R0 699 aa1.34□□□□□ -2.19
TNRC6A-210ENST00000563201 NAT8LQ8N9F0 302 aa1.34□□□□□ -2.19
TNRC6A-210ENST00000563201 TRPV3Q8NET8 790 aa1.34□□□□□ -2.19
TNRC6A-210ENST00000563201 KIAA1524Q8TCG1 905 aa1.34□□□□□ -2.19
TNRC6A-210ENST00000563201 RSPH1Q8WYR4 309 aa1.34□□□□□ -2.19
TNRC6A-210ENST00000563201 HAS2Q92819 552 aa1.34□□□□□ -2.19
TNRC6A-210ENST00000563201 JAKMIP1Q96N16 626 aaKnown RBP1.34□□□□□ -2.19
TNRC6A-210ENST00000563201 ERGIC2Q96RQ1 377 aa1.34□□□□□ -2.19
TNRC6A-210ENST00000563201 P2RY13Q9BPV8 354 aa1.34□□□□□ -2.19
TNRC6A-210ENST00000563201 ZNF559Q9BR84 538 aa1.34□□□□□ -2.19
TNRC6A-210ENST00000563201 TMEM175Q9BSA9 504 aa1.34□□□□□ -2.19
TNRC6A-210ENST00000563201 CENPOQ9BU64 300 aa1.34□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms