RNA–Protein interactions for RNA: ENST00000560987.5

SNRPA1-214, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-214ENST00000560987 CALHM2Q9HA72 323 aa8.16□□□□□ -1.1
SNRPA1-214ENST00000560987 MED17Q9NVC6 651 aa8.16□□□□□ -1.1
SNRPA1-214ENST00000560987 KLHL14Q9P2G3 628 aa8.16□□□□□ -1.1
SNRPA1-214ENST00000560987 KCNE5Q9UJ90 142 aa8.16□□□□□ -1.1
SNRPA1-214ENST00000560987 SLC35A3Q9Y2D2 325 aa8.16□□□□□ -1.1
SNRPA1-214ENST00000560987 FAM215AQ9Y5M1 114 aa8.16□□□□□ -1.1
SNRPA1-214ENST00000560987 AP4B1Q9Y6B7 739 aa8.16□□□□□ -1.1
SNRPA1-214ENST00000560987 A0A0G2JNJ9 132 aa8.15□□□□□ -1.1
SNRPA1-214ENST00000560987 A0A0G2JPF8 293 aa8.15□□□□□ -1.1
SNRPA1-214ENST00000560987 PRAMEF27A3QJZ7 478 aa8.15□□□□□ -1.1
SNRPA1-214ENST00000560987 GMNCA6NCL1 334 aa8.15□□□□□ -1.1
SNRPA1-214ENST00000560987 CLCA1A8K7I4 914 aa8.15□□□□□ -1.1
SNRPA1-214ENST00000560987 HNRNPCL2B2RXH8 293 aa8.15□□□□□ -1.1
SNRPA1-214ENST00000560987 B4DXG7 233 aa8.15□□□□□ -1.1
SNRPA1-214ENST00000560987 HNRNPCL3B7ZW38 293 aa8.15□□□□□ -1.1
SNRPA1-214ENST00000560987 NPIPB9F8W1W9 429 aa8.15□□□□□ -1.1
SNRPA1-214ENST00000560987 EIF1AYO14602 144 aaKnown RBP8.15□□□□□ -1.1
SNRPA1-214ENST00000560987 OIP5O43482 229 aa8.15□□□□□ -1.1
SNRPA1-214ENST00000560987 HNRNPCL1O60812 293 aaKnown RBP8.15□□□□□ -1.1
SNRPA1-214ENST00000560987 CCDC22O60826 627 aa8.15□□□□□ -1.1
SNRPA1-214ENST00000560987 DBIP07108 87 aaKnown RBP8.15□□□□□ -1.1
SNRPA1-214ENST00000560987 CHRM4P08173 479 aa8.15□□□□□ -1.1
SNRPA1-214ENST00000560987 TFPTP0C1Z6 253 aa8.15□□□□□ -1.1
SNRPA1-214ENST00000560987 LINGO3P0C6S8 592 aa8.15□□□□□ -1.1
SNRPA1-214ENST00000560987 HNRNPCL4P0DMR1 293 aa8.15□□□□□ -1.1
SNRPA1-214ENST00000560987 ZNF708P17019 499 aa8.15□□□□□ -1.1
SNRPA1-214ENST00000560987 PGCP20142 388 aa8.15□□□□□ -1.1
SNRPA1-214ENST00000560987 SFTPDP35247 375 aa8.15□□□□□ -1.1
SNRPA1-214ENST00000560987 EIF1P41567 113 aaKnown RBP8.15□□□□□ -1.1
SNRPA1-214ENST00000560987 EIF1AXP47813 144 aaKnown RBP8.15□□□□□ -1.1
SNRPA1-214ENST00000560987 LHX2P50458 406 aa8.15□□□□□ -1.1
SNRPA1-214ENST00000560987 AGFG1P52594 562 aaKnown RBP8.15□□□□□ -1.1
SNRPA1-214ENST00000560987 SUCLG1P53597 346 aaKnown RBP8.15□□□□□ -1.1
SNRPA1-214ENST00000560987 CRISP3P54108 245 aa8.15□□□□□ -1.1
SNRPA1-214ENST00000560987 CLDN15P56746 228 aa8.15□□□□□ -1.1
SNRPA1-214ENST00000560987 CLDN20P56880 219 aa8.15□□□□□ -1.1
SNRPA1-214ENST00000560987 CARD18P57730 90 aa8.15□□□□□ -1.1
SNRPA1-214ENST00000560987 GNGT1P63211 74 aa8.15□□□□□ -1.1
SNRPA1-214ENST00000560987 KLF10Q13118 480 aa8.15□□□□□ -1.1
SNRPA1-214ENST00000560987 CYLC2Q14093 348 aaPredicted RBP8.15□□□□□ -1.1
SNRPA1-214ENST00000560987 LARS2Q15031 903 aaKnown RBP8.15□□□□□ -1.1
SNRPA1-214ENST00000560987 MAPRE2Q15555 327 aa8.15□□□□□ -1.1
SNRPA1-214ENST00000560987 PLPPR5Q32ZL2 321 aa8.15□□□□□ -1.1
SNRPA1-214ENST00000560987 ACSF3Q4G176 576 aaPredicted RBP8.15□□□□□ -1.1
SNRPA1-214ENST00000560987 RIPPLY2Q5TAB7 128 aa8.15□□□□□ -1.1
SNRPA1-214ENST00000560987 NSUN5P2Q63ZY6 315 aa8.15□□□□□ -1.1
SNRPA1-214ENST00000560987 CGB2Q6NT52 195 aa8.15□□□□□ -1.1
SNRPA1-214ENST00000560987 PLXDC2Q6UX71 529 aa8.15□□□□□ -1.1
SNRPA1-214ENST00000560987 FRRS1Q6ZNA5 592 aa8.15□□□□□ -1.1
SNRPA1-214ENST00000560987 DHDDSQ86SQ9 333 aa8.15□□□□□ -1.1
SNRPA1-214ENST00000560987 LACC1Q8IV20 430 aa8.15□□□□□ -1.1
SNRPA1-214ENST00000560987 LILRA2Q8N149 483 aa8.15□□□□□ -1.1
SNRPA1-214ENST00000560987 TNIP2Q8NFZ5 429 aa8.15□□□□□ -1.1
SNRPA1-214ENST00000560987 OR52P1PQ8NH57 321 aa8.15□□□□□ -1.1
SNRPA1-214ENST00000560987 OR5W2Q8NH69 310 aa8.15□□□□□ -1.1
SNRPA1-214ENST00000560987 LILRB4Q8NHJ6 448 aa8.15□□□□□ -1.1
SNRPA1-214ENST00000560987 TSPEARQ8WU66 669 aa8.15□□□□□ -1.1
SNRPA1-214ENST00000560987 SLC38A5Q8WUX1 472 aa8.15□□□□□ -1.1
SNRPA1-214ENST00000560987 WDR60Q8WVS4 1066 aa8.15□□□□□ -1.1
SNRPA1-214ENST00000560987 TMEM234Q8WY98 164 aa8.15□□□□□ -1.1
SNRPA1-214ENST00000560987 PMM1Q92871 262 aa8.15□□□□□ -1.1
SNRPA1-214ENST00000560987 ZNF317Q96PQ6 595 aaPredicted RBP8.15□□□□□ -1.1
SNRPA1-214ENST00000560987 TM9SF2Q99805 663 aa8.15□□□□□ -1.1
SNRPA1-214ENST00000560987 PINK1Q9BXM7 581 aa8.15□□□□□ -1.1
SNRPA1-214ENST00000560987 SAP130Q9H0E3 1048 aa8.15□□□□□ -1.1
SNRPA1-214ENST00000560987 SLC38A1Q9H2H9 487 aa8.15□□□□□ -1.1
SNRPA1-214ENST00000560987 PIF1Q9H611 641 aa8.15□□□□□ -1.1
SNRPA1-214ENST00000560987 ARMC7Q9H6L4 198 aa8.15□□□□□ -1.1
SNRPA1-214ENST00000560987 TMEM185BQ9H7F4 350 aa8.15□□□□□ -1.1
SNRPA1-214ENST00000560987 CHST11Q9NPF2 352 aa8.15□□□□□ -1.1
SNRPA1-214ENST00000560987 SAR1AQ9NR31 198 aa8.15□□□□□ -1.1
SNRPA1-214ENST00000560987 SERINC1Q9NRX5 453 aa8.15□□□□□ -1.1
SNRPA1-214ENST00000560987 VAPAQ9P0L0 249 aa8.15□□□□□ -1.1
SNRPA1-214ENST00000560987 Q9UFV3 132 aa8.15□□□□□ -1.1
SNRPA1-214ENST00000560987 ICAM5Q9UMF0 924 aa8.15□□□□□ -1.1
SNRPA1-214ENST00000560987 CORO2BQ9UQ03 480 aa8.15□□□□□ -1.1
SNRPA1-214ENST00000560987 GPC6Q9Y625 555 aaPredicted RBP8.15□□□□□ -1.1
SNRPA1-214ENST00000560987 PCNX1Q96RV3 2341 aa8.15□□□□□ -1.1
SNRPA1-214ENST00000560987 MED12Q93074 2177 aa8.14□□□□□ -1.11
SNRPA1-214ENST00000560987 PHF3Q92576 2039 aaKnown RBP8.14□□□□□ -1.11
SNRPA1-214ENST00000560987 CENPVL1A0A0U1RR11 272 aa8.14□□□□□ -1.11
SNRPA1-214ENST00000560987 NKX2-6A6NCS4 301 aa8.14□□□□□ -1.11
SNRPA1-214ENST00000560987 CD8B2A6NJW9 211 aa8.14□□□□□ -1.11
SNRPA1-214ENST00000560987 CLDN24A6NM45 220 aa8.14□□□□□ -1.11
SNRPA1-214ENST00000560987 KDM4EB2RXH2 506 aaPredicted RBP8.14□□□□□ -1.11
SNRPA1-214ENST00000560987 H0YC42 278 aa8.14□□□□□ -1.11
SNRPA1-214ENST00000560987 DVL2O14641 736 aa8.14□□□□□ -1.11
SNRPA1-214ENST00000560987 KIAA0513O60268 411 aa8.14□□□□□ -1.11
SNRPA1-214ENST00000560987 SYNGR4O95473 234 aa8.14□□□□□ -1.11
SNRPA1-214ENST00000560987 GUSBP08236 651 aa8.14□□□□□ -1.11
SNRPA1-214ENST00000560987 TMIGD3P0DMS9 266 aaPredicted RBP8.14□□□□□ -1.11
SNRPA1-214ENST00000560987 TFPIP10646 304 aa8.14□□□□□ -1.11
SNRPA1-214ENST00000560987 BMP5P22003 454 aa8.14□□□□□ -1.11
SNRPA1-214ENST00000560987 SLC6A2P23975 617 aa8.14□□□□□ -1.11
SNRPA1-214ENST00000560987 TIMP3P35625 211 aa8.14□□□□□ -1.11
SNRPA1-214ENST00000560987 ADH7P40394 386 aa8.14□□□□□ -1.11
SNRPA1-214ENST00000560987 IDH2P48735 452 aaKnown RBP8.14□□□□□ -1.11
SNRPA1-214ENST00000560987 TPD52P55327 224 aaPredicted RBP8.14□□□□□ -1.11
SNRPA1-214ENST00000560987 SUMO3P55854 103 aaPredicted RBP8.14□□□□□ -1.11
SNRPA1-214ENST00000560987 CLDN18P56856 261 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms