RNA–Protein interactions for RNA: ENST00000559974.5

RABGGTA-212, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,963 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-212ENST00000559974 TPBGQ13641 420 aa13.38□□□□□ -0.27
RABGGTA-212ENST00000559974 ZNF528Q3MIS6 628 aa13.38□□□□□ -0.27
RABGGTA-212ENST00000559974 SPANXN2Q5MJ10 180 aa13.38□□□□□ -0.27
RABGGTA-212ENST00000559974 PDZK1Q5T2W1 519 aa13.38□□□□□ -0.27
RABGGTA-212ENST00000559974 ZC3H14Q6PJT7 736 aaKnown RBP13.38□□□□□ -0.27
RABGGTA-212ENST00000559974 CCDC190Q86UF4 302 aa13.38□□□□□ -0.27
RABGGTA-212ENST00000559974 SLC22A16Q86VW1 577 aa13.38□□□□□ -0.27
RABGGTA-212ENST00000559974 LMX1AQ8TE12 382 aa13.38□□□□□ -0.27
RABGGTA-212ENST00000559974 ADAMTS18Q8TE60 1221 aa13.38□□□□□ -0.27
RABGGTA-212ENST00000559974 RBM18Q96H35 190 aaKnown RBP13.38□□□□□ -0.27
RABGGTA-212ENST00000559974 HS6ST2Q96MM7 605 aa13.38□□□□□ -0.27
RABGGTA-212ENST00000559974 SLC38A3Q99624 504 aa13.38□□□□□ -0.27
RABGGTA-212ENST00000559974 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.38□□□□□ -0.27
RABGGTA-212ENST00000559974 TMEM27Q9HBJ8 222 aa13.38□□□□□ -0.27
RABGGTA-212ENST00000559974 SMURF1Q9HCE7 757 aa13.38□□□□□ -0.27
RABGGTA-212ENST00000559974 FAM86C1Q9NVL1 165 aa13.38□□□□□ -0.27
RABGGTA-212ENST00000559974 TXNL4BQ9NX01 149 aaKnown RBP13.38□□□□□ -0.27
RABGGTA-212ENST00000559974 CBLCQ9ULV8 474 aa13.38□□□□□ -0.27
RABGGTA-212ENST00000559974 TMEM5Q9Y2B1 443 aa13.38□□□□□ -0.27
RABGGTA-212ENST00000559974 EXOGQ9Y2C4 368 aaKnown RBP13.38□□□□□ -0.27
RABGGTA-212ENST00000559974 PATE3B3GLJ2 98 aa13.37□□□□□ -0.27
RABGGTA-212ENST00000559974 CDC123O75794 336 aaPredicted RBP13.37□□□□□ -0.27
RABGGTA-212ENST00000559974 NSA2O95478 260 aaKnown RBP13.37□□□□□ -0.27
RABGGTA-212ENST00000559974 SSTR4P31391 388 aa13.37□□□□□ -0.27
RABGGTA-212ENST00000559974 FXYD6P3P58550 94 aa13.37□□□□□ -0.27
RABGGTA-212ENST00000559974 DSG2Q14126 1118 aa13.37□□□□□ -0.27
RABGGTA-212ENST00000559974 FAM53BQ14153 422 aa13.37□□□□□ -0.27
RABGGTA-212ENST00000559974 AMZ1Q400G9 498 aa13.37□□□□□ -0.27
RABGGTA-212ENST00000559974 RPL13AP3Q6NVV1 102 aa13.37□□□□□ -0.27
RABGGTA-212ENST00000559974 GRAMD2AQ8IUY3 354 aa13.37□□□□□ -0.27
RABGGTA-212ENST00000559974 CDK20Q8IZL9 346 aa13.37□□□□□ -0.27
RABGGTA-212ENST00000559974 ZNF614Q8N883 585 aa13.37□□□□□ -0.27
RABGGTA-212ENST00000559974 BBS1Q8NFJ9 593 aa13.37□□□□□ -0.27
RABGGTA-212ENST00000559974 OR4F15Q8NGB8 312 aa13.37□□□□□ -0.27
RABGGTA-212ENST00000559974 DNASE2BQ8WZ79 361 aa13.37□□□□□ -0.27
RABGGTA-212ENST00000559974 CNOT9Q92600 299 aaKnown RBP13.37□□□□□ -0.27
RABGGTA-212ENST00000559974 UFD1Q92890 307 aa13.37□□□□□ -0.27
RABGGTA-212ENST00000559974 ARHGAP9Q9BRR9 750 aa13.37□□□□□ -0.27
RABGGTA-212ENST00000559974 BARHL1Q9BZE3 327 aa13.37□□□□□ -0.27
RABGGTA-212ENST00000559974 ATP13A2Q9NQ11 1180 aa13.37□□□□□ -0.27
RABGGTA-212ENST00000559974 HINT3Q9NQE9 182 aaKnown RBP13.37□□□□□ -0.27
RABGGTA-212ENST00000559974 POLE4Q9NR33 117 aa13.37□□□□□ -0.27
RABGGTA-212ENST00000559974 PRTFDC1Q9NRG1 225 aa13.37□□□□□ -0.27
RABGGTA-212ENST00000559974 SNTG1Q9NSN8 517 aa13.37□□□□□ -0.27
RABGGTA-212ENST00000559974 H2AFY2Q9P0M6 372 aaPredicted RBP13.37□□□□□ -0.27
RABGGTA-212ENST00000559974 MED31Q9Y3C7 131 aa13.37□□□□□ -0.27
RABGGTA-212ENST00000559974 CACNA1EQ15878 2313 aa13.37□□□□□ -0.27
RABGGTA-212ENST00000559974 A0A0B4J2E0 115 aa13.36□□□□□ -0.27
RABGGTA-212ENST00000559974 A0A1B0GX12 115 aa13.36□□□□□ -0.27
RABGGTA-212ENST00000559974 DLL1O00548 723 aa13.36□□□□□ -0.27
RABGGTA-212ENST00000559974 BHLHE40O14503 412 aa13.36□□□□□ -0.27
RABGGTA-212ENST00000559974 CTDSP2O14595 271 aa13.36□□□□□ -0.27
RABGGTA-212ENST00000559974 IGHA1P01876 353 aa13.36□□□□□ -0.27
RABGGTA-212ENST00000559974 BMP7P18075 431 aa13.36□□□□□ -0.27
RABGGTA-212ENST00000559974 FUT1P19526 365 aa13.36□□□□□ -0.27
RABGGTA-212ENST00000559974 TBXA2RP21731 343 aa13.36□□□□□ -0.27
RABGGTA-212ENST00000559974 MAT1AQ00266 395 aaKnown RBP13.36□□□□□ -0.27
RABGGTA-212ENST00000559974 LYSMD4Q5XG99 296 aa13.36□□□□□ -0.27
RABGGTA-212ENST00000559974 STEAP3Q658P3 488 aa13.36□□□□□ -0.27
RABGGTA-212ENST00000559974 TMPRSS11FQ6ZWK6 438 aa13.36□□□□□ -0.27
RABGGTA-212ENST00000559974 CXXC5Q7LFL8 322 aaKnown RBP13.36□□□□□ -0.27
RABGGTA-212ENST00000559974 LHFPL3Q86UP9 236 aa13.36□□□□□ -0.27
RABGGTA-212ENST00000559974 LSRQ86X29 649 aaPredicted RBP13.36□□□□□ -0.27
RABGGTA-212ENST00000559974 CPOQ8IVL8 374 aa13.36□□□□□ -0.27
RABGGTA-212ENST00000559974 ZNF485Q8NCK3 441 aa13.36□□□□□ -0.27
RABGGTA-212ENST00000559974 OR4N2Q8NGD1 307 aa13.36□□□□□ -0.27
RABGGTA-212ENST00000559974 OR6C4Q8NGE1 309 aa13.36□□□□□ -0.27
RABGGTA-212ENST00000559974 BPIFA2Q96DR5 249 aa13.36□□□□□ -0.27
RABGGTA-212ENST00000559974 CEP19Q96LK0 163 aa13.36□□□□□ -0.27
RABGGTA-212ENST00000559974 VSTM2LQ96N03 204 aa13.36□□□□□ -0.27
RABGGTA-212ENST00000559974 ZNF285Q96NJ3 590 aa13.36□□□□□ -0.27
RABGGTA-212ENST00000559974 DGAT2Q96PD7 388 aa13.36□□□□□ -0.27
RABGGTA-212ENST00000559974 SF3B6Q9Y3B4 125 aaKnown RBP13.36□□□□□ -0.27
RABGGTA-212ENST00000559974 BOLA2-SMG1P6H3BVE0 249 aa13.36□□□□□ -0.27
RABGGTA-212ENST00000559974 HRKO00198 91 aa13.36□□□□□ -0.27
RABGGTA-212ENST00000559974 CLDN4O14493 209 aa13.36□□□□□ -0.27
RABGGTA-212ENST00000559974 PLD2O14939 933 aa13.36□□□□□ -0.27
RABGGTA-212ENST00000559974 CHP2O43745 196 aa13.36□□□□□ -0.27
RABGGTA-212ENST00000559974 RCBTB2O95199 551 aa13.36□□□□□ -0.27
RABGGTA-212ENST00000559974 IL1AP01583 271 aa13.36□□□□□ -0.27
RABGGTA-212ENST00000559974 IGKV1D-16P01601 117 aa13.36□□□□□ -0.27
RABGGTA-212ENST00000559974 CD79BP40259 229 aa13.36□□□□□ -0.27
RABGGTA-212ENST00000559974 MLLT3P42568 568 aaPredicted RBP13.36□□□□□ -0.27
RABGGTA-212ENST00000559974 GABRA4P48169 554 aa13.36□□□□□ -0.27
RABGGTA-212ENST00000559974 CTBP2P56545 445 aa13.36□□□□□ -0.27
RABGGTA-212ENST00000559974 RPS25P62851 125 aaKnown RBP13.36□□□□□ -0.27
RABGGTA-212ENST00000559974 GARNL3Q5VVW2 1013 aa13.36□□□□□ -0.27
RABGGTA-212ENST00000559974 GID4Q8IVV7 300 aa13.36□□□□□ -0.27
RABGGTA-212ENST00000559974 LNX2Q8N448 690 aa13.36□□□□□ -0.27
RABGGTA-212ENST00000559974 PSD4Q8NDX1 1056 aa13.36□□□□□ -0.27
RABGGTA-212ENST00000559974 FAM83FQ8NEG4 500 aaPredicted RBP13.36□□□□□ -0.27
RABGGTA-212ENST00000559974 GRHL3Q8TE85 626 aa13.36□□□□□ -0.27
RABGGTA-212ENST00000559974 PIGKQ92643 395 aa13.36□□□□□ -0.27
RABGGTA-212ENST00000559974 TMEM203Q969S6 136 aa13.36□□□□□ -0.27
RABGGTA-212ENST00000559974 SLC30A2Q9BRI3 323 aa13.36□□□□□ -0.27
RABGGTA-212ENST00000559974 JAM3Q9BX67 310 aa13.36□□□□□ -0.27
RABGGTA-212ENST00000559974 FN3KQ9H479 309 aa13.36□□□□□ -0.27
RABGGTA-212ENST00000559974 SP140LQ9H930 580 aa13.36□□□□□ -0.27
RABGGTA-212ENST00000559974 DNAJB12Q9NXW2 375 aaKnown RBP13.36□□□□□ -0.27
RABGGTA-212ENST00000559974 PLCL2Q9UPR0 1127 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms