RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 B4GALNT2Q8NHY0 566 aa9.87□□□□□ -0.83
TPM1-217ENST00000559108 GPR119Q8TDV5 335 aa9.87□□□□□ -0.83
TPM1-217ENST00000559108 RELTQ969Z4 430 aa9.87□□□□□ -0.83
TPM1-217ENST00000559108 CLPTM1LQ96KA5 538 aa9.87□□□□□ -0.83
TPM1-217ENST00000559108 HOPXQ9BPY8 73 aaPredicted RBP9.87□□□□□ -0.83
TPM1-217ENST00000559108 ECSITQ9BQ95 431 aa9.87□□□□□ -0.83
TPM1-217ENST00000559108 ACKR4Q9NPB9 350 aa9.87□□□□□ -0.83
TPM1-217ENST00000559108 MED17Q9NVC6 651 aa9.87□□□□□ -0.83
TPM1-217ENST00000559108 THUMPD1Q9NXG2 353 aaKnown RBP9.87□□□□□ -0.83
TPM1-217ENST00000559108 TAS2R1Q9NYW7 299 aa9.87□□□□□ -0.83
TPM1-217ENST00000559108 SEC14L3Q9UDX4 400 aa9.87□□□□□ -0.83
TPM1-217ENST00000559108 CD300AQ9UGN4 299 aa9.87□□□□□ -0.83
TPM1-217ENST00000559108 VDAC3Q9Y277 283 aa9.87□□□□□ -0.83
TPM1-217ENST00000559108 TRGV5A0A0B4J1U4 118 aa9.86□□□□□ -0.83
TPM1-217ENST00000559108 ANKUB1A6NFN9 424 aa9.86□□□□□ -0.83
TPM1-217ENST00000559108 EIF4E1BA6NMX2 242 aaKnown RBP9.86□□□□□ -0.83
TPM1-217ENST00000559108 C5orf58C9J3I9 102 aa9.86□□□□□ -0.83
TPM1-217ENST00000559108 SEMA7AO75326 666 aa9.86□□□□□ -0.83
TPM1-217ENST00000559108 CYP7B1O75881 506 aa9.86□□□□□ -0.83
TPM1-217ENST00000559108 DBIP07108 87 aaKnown RBP9.86□□□□□ -0.83
TPM1-217ENST00000559108 THBS1P07996 1170 aa9.86□□□□□ -0.83
TPM1-217ENST00000559108 RNF224P0DH78 156 aa9.86□□□□□ -0.83
TPM1-217ENST00000559108 HPGDP15428 266 aa9.86□□□□□ -0.83
TPM1-217ENST00000559108 PRKCAP17252 672 aa9.86□□□□□ -0.83
TPM1-217ENST00000559108 BMP7P18075 431 aa9.86□□□□□ -0.83
TPM1-217ENST00000559108 HK1P19367 917 aa9.86□□□□□ -0.83
TPM1-217ENST00000559108 CALB2P22676 271 aa9.86□□□□□ -0.83
TPM1-217ENST00000559108 HTR2AP28223 471 aa9.86□□□□□ -0.83
TPM1-217ENST00000559108 EEFSECP57772 596 aaKnown RBP9.86□□□□□ -0.83
TPM1-217ENST00000559108 SRSF1Q07955 248 aaKnown RBP eCLIP9.86□□□□□ -0.83
TPM1-217ENST00000559108 RBBP4Q09028 425 aa9.86□□□□□ -0.83
TPM1-217ENST00000559108 SLC10A1Q14973 349 aa9.86□□□□□ -0.83
TPM1-217ENST00000559108 QPRTQ15274 297 aa9.86□□□□□ -0.83
TPM1-217ENST00000559108 TENM4Q6N022 2769 aa9.86□□□□□ -0.83
TPM1-217ENST00000559108 GFRALQ6UXV0 394 aa9.86□□□□□ -0.83
TPM1-217ENST00000559108 CCDC80Q76M96 950 aa9.86□□□□□ -0.83
TPM1-217ENST00000559108 MTERF4Q7Z6M4 381 aaKnown RBP9.86□□□□□ -0.83
TPM1-217ENST00000559108 RBM45Q8IUH3 476 aaKnown RBP9.86□□□□□ -0.83
TPM1-217ENST00000559108 METTL25Q8N6Q8 603 aa9.86□□□□□ -0.83
TPM1-217ENST00000559108 FAM86B1Q8N7N1 296 aa9.86□□□□□ -0.83
TPM1-217ENST00000559108 ZNF527Q8NB42 609 aa9.86□□□□□ -0.83
TPM1-217ENST00000559108 NEIL3Q8TAT5 605 aa9.86□□□□□ -0.83
TPM1-217ENST00000559108 SPATA9Q9BWV2 254 aa9.86□□□□□ -0.83
TPM1-217ENST00000559108 UGT2B28Q9BY64 529 aa9.86□□□□□ -0.83
TPM1-217ENST00000559108 LAT2Q9GZY6 243 aa9.86□□□□□ -0.83
TPM1-217ENST00000559108 ALG2Q9H553 416 aa9.86□□□□□ -0.83
TPM1-217ENST00000559108 AGPAT4Q9NRZ5 378 aa9.86□□□□□ -0.83
TPM1-217ENST00000559108 QPCTLQ9NXS2 382 aa9.86□□□□□ -0.83
TPM1-217ENST00000559108 TAS2R10Q9NYW0 307 aa9.86□□□□□ -0.83
TPM1-217ENST00000559108 EGFL7Q9UHF1 273 aa9.86□□□□□ -0.83
TPM1-217ENST00000559108 ANGPT4Q9Y264 503 aa9.86□□□□□ -0.83
TPM1-217ENST00000559108 ZNF835Q9Y2P0 537 aa9.86□□□□□ -0.83
TPM1-217ENST00000559108 ESPL1Q14674 2120 aa9.86□□□□□ -0.83
TPM1-217ENST00000559108 PHF3Q92576 2039 aaKnown RBP9.85□□□□□ -0.83
TPM1-217ENST00000559108 C15orf38-AP3S2A0A0A6YYH1 394 aa9.85□□□□□ -0.83
TPM1-217ENST00000559108 OR2M5A3KFT3 312 aa9.85□□□□□ -0.83
TPM1-217ENST00000559108 M0R3H8 397 aa9.85□□□□□ -0.83
TPM1-217ENST00000559108 ETV2O00321 342 aaPredicted RBP9.85□□□□□ -0.83
TPM1-217ENST00000559108 AQP7O14520 342 aa9.85□□□□□ -0.83
TPM1-217ENST00000559108 EIF4E2O60573 245 aaKnown RBP9.85□□□□□ -0.83
TPM1-217ENST00000559108 PDE5AO76074 875 aa9.85□□□□□ -0.83
TPM1-217ENST00000559108 OPN1LWP04000 364 aa9.85□□□□□ -0.83
TPM1-217ENST00000559108 IL7RP16871 459 aa9.85□□□□□ -0.83
TPM1-217ENST00000559108 TCN1P20061 433 aaPredicted RBP9.85□□□□□ -0.83
TPM1-217ENST00000559108 PRKAR1BP31321 381 aa9.85□□□□□ -0.83
TPM1-217ENST00000559108 RYKP34925 604 aa9.85□□□□□ -0.83
TPM1-217ENST00000559108 CLK3P49761 638 aaKnown RBP9.85□□□□□ -0.83
TPM1-217ENST00000559108 P2RX1P51575 399 aa9.85□□□□□ -0.83
TPM1-217ENST00000559108 CCR4P51679 360 aa9.85□□□□□ -0.83
TPM1-217ENST00000559108 SUCLG1P53597 346 aaKnown RBP9.85□□□□□ -0.83
TPM1-217ENST00000559108 DSCR4P56555 118 aaPredicted RBP9.85□□□□□ -0.83
TPM1-217ENST00000559108 CLDN18P56856 261 aa9.85□□□□□ -0.83
TPM1-217ENST00000559108 BNIP1Q12981 228 aa9.85□□□□□ -0.83
TPM1-217ENST00000559108 TOMM20Q15388 145 aa9.85□□□□□ -0.83
TPM1-217ENST00000559108 EIF2S3LQ2VIR3 472 aaKnown RBP9.85□□□□□ -0.83
TPM1-217ENST00000559108 LIN52Q52LA3 116 aa9.85□□□□□ -0.83
TPM1-217ENST00000559108 ZNF311Q5JNZ3 666 aa9.85□□□□□ -0.83
TPM1-217ENST00000559108 RTL6Q6ICC9 239 aa9.85□□□□□ -0.83
TPM1-217ENST00000559108 DHRS4L2Q6PKH6 230 aa9.85□□□□□ -0.83
TPM1-217ENST00000559108 C3P1Q6ZMU1 363 aa9.85□□□□□ -0.83
TPM1-217ENST00000559108 BNC2Q6ZN30 1099 aaPredicted RBP9.85□□□□□ -0.83
TPM1-217ENST00000559108 EIF3MQ7L2H7 374 aaKnown RBP9.85□□□□□ -0.83
TPM1-217ENST00000559108 TSEN54Q7Z6J9 526 aaKnown RBP9.85□□□□□ -0.83
TPM1-217ENST00000559108 ARPINQ7Z6K5 226 aa9.85□□□□□ -0.83
TPM1-217ENST00000559108 ZNF605Q86T29 641 aa9.85□□□□□ -0.83
TPM1-217ENST00000559108 GGNQ86UU5 652 aa9.85□□□□□ -0.83
TPM1-217ENST00000559108 MISPQ8IVT2 679 aa9.85□□□□□ -0.83
TPM1-217ENST00000559108 PEX5LQ8IYB4 626 aa9.85□□□□□ -0.83
TPM1-217ENST00000559108 TMCO5AQ8N6Q1 288 aa9.85□□□□□ -0.83
TPM1-217ENST00000559108 OR5W2Q8NH69 310 aa9.85□□□□□ -0.83
TPM1-217ENST00000559108 OR14L1PQ8NHC6 308 aa9.85□□□□□ -0.83
TPM1-217ENST00000559108 OIT3Q8WWZ8 545 aa9.85□□□□□ -0.83
TPM1-217ENST00000559108 RNF145Q96MT1 663 aa9.85□□□□□ -0.83
TPM1-217ENST00000559108 CDRT15Q96T59 188 aa9.85□□□□□ -0.83
TPM1-217ENST00000559108 ARHGDIGQ99819 225 aa9.85□□□□□ -0.83
TPM1-217ENST00000559108 SH3GL1Q99961 368 aa9.85□□□□□ -0.83
TPM1-217ENST00000559108 PCDHAC1Q9H158 963 aa9.85□□□□□ -0.83
TPM1-217ENST00000559108 SPAG4Q9NPE6 437 aa9.85□□□□□ -0.83
TPM1-217ENST00000559108 EXOSC3Q9NQT5 275 aaKnown RBP9.85□□□□□ -0.83
TPM1-217ENST00000559108 SDHAF3Q9NRP4 125 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms