RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 RHBGQ9H310 441 aa2.31□□□□□ -2.04
SPG11-206ENST00000558093 PSTPIP2Q9H939 334 aa2.31□□□□□ -2.04
SPG11-206ENST00000558093 LRRC40Q9H9A6 602 aa2.31□□□□□ -2.04
SPG11-206ENST00000558093 ISG20L2Q9H9L3 353 aaKnown RBP2.31□□□□□ -2.04
SPG11-206ENST00000558093 LY9Q9HBG7 655 aa2.31□□□□□ -2.04
SPG11-206ENST00000558093 SPACA1Q9HBV2 294 aa2.31□□□□□ -2.04
SPG11-206ENST00000558093 SDHAF3Q9NRP4 125 aa2.31□□□□□ -2.04
SPG11-206ENST00000558093 TMEM9Q9P0T7 183 aa2.31□□□□□ -2.04
SPG11-206ENST00000558093 ANKMY1Q9P2S6 941 aa2.31□□□□□ -2.04
SPG11-206ENST00000558093 COPS7AQ9UBW8 275 aa2.31□□□□□ -2.04
SPG11-206ENST00000558093 NUDCQ9Y266 331 aa2.31□□□□□ -2.04
SPG11-206ENST00000558093 TDRKHQ9Y2W6 561 aaKnown RBP2.31□□□□□ -2.04
SPG11-206ENST00000558093 ZNF175Q9Y473 711 aa2.31□□□□□ -2.04
SPG11-206ENST00000558093 EVC2Q86UK5 1308 aa2.31□□□□□ -2.04
SPG11-206ENST00000558093 SYNJ2O15056 1496 aa2.31□□□□□ -2.04
SPG11-206ENST00000558093 COL16A1Q07092 1604 aaPredicted RBP2.31□□□□□ -2.04
SPG11-206ENST00000558093 C15orf38-AP3S2A0A0A6YYH1 394 aa2.3□□□□□ -2.04
SPG11-206ENST00000558093 WI2-2373I1.2A0A1W2PRP0 233 aa2.3□□□□□ -2.04
SPG11-206ENST00000558093 GOLGA8OA6NCC3 632 aa2.3□□□□□ -2.04
SPG11-206ENST00000558093 LRIT2A6NDA9 550 aa2.3□□□□□ -2.04
SPG11-206ENST00000558093 OR6C65A6NJZ3 312 aa2.3□□□□□ -2.04
SPG11-206ENST00000558093 ZNF879B4DU55 563 aa2.3□□□□□ -2.04
SPG11-206ENST00000558093 GOLGA8NF8WBI6 632 aa2.3□□□□□ -2.04
SPG11-206ENST00000558093 RRP8O43159 456 aaKnown RBP2.3□□□□□ -2.04
SPG11-206ENST00000558093 HSF2BPO75031 334 aa2.3□□□□□ -2.04
SPG11-206ENST00000558093 SCGB2A1O75556 95 aa2.3□□□□□ -2.04
SPG11-206ENST00000558093 SURF6O75683 361 aaKnown RBP2.3□□□□□ -2.04
SPG11-206ENST00000558093 CIB2O75838 187 aa2.3□□□□□ -2.04
SPG11-206ENST00000558093 KLHL2O95198 593 aa2.3□□□□□ -2.04
SPG11-206ENST00000558093 GNA14O95837 355 aa2.3□□□□□ -2.04
SPG11-206ENST00000558093 CSTAP01040 98 aa2.3□□□□□ -2.04
SPG11-206ENST00000558093 ABHD2P08910 425 aa2.3□□□□□ -2.04
SPG11-206ENST00000558093 EPB41P11171 864 aaKnown RBP2.3□□□□□ -2.04
SPG11-206ENST00000558093 CPN1P15169 458 aa2.3□□□□□ -2.04
SPG11-206ENST00000558093 SDC1P18827 310 aa2.3□□□□□ -2.04
SPG11-206ENST00000558093 IGHV1-2P23083 117 aa2.3□□□□□ -2.04
SPG11-206ENST00000558093 PTPN6P29350 595 aa2.3□□□□□ -2.04
SPG11-206ENST00000558093 SFNP31947 248 aa2.3□□□□□ -2.04
SPG11-206ENST00000558093 UGT1A3P35503 534 aa2.3□□□□□ -2.04
SPG11-206ENST00000558093 OR1D4P47884 311 aa2.3□□□□□ -2.04
SPG11-206ENST00000558093 NPY2RP49146 381 aa2.3□□□□□ -2.04
SPG11-206ENST00000558093 STARP49675 285 aa2.3□□□□□ -2.04
SPG11-206ENST00000558093 DIO3P55073 304 aa2.3□□□□□ -2.04
SPG11-206ENST00000558093 UCP2P55851 309 aa2.3□□□□□ -2.04
SPG11-206ENST00000558093 MAP3K7CLP57077 242 aa2.3□□□□□ -2.04
SPG11-206ENST00000558093 NLRP11P59045 1033 aaKnown RBP2.3□□□□□ -2.04
SPG11-206ENST00000558093 DR1Q01658 176 aa2.3□□□□□ -2.04
SPG11-206ENST00000558093 PUDPQ08623 228 aa2.3□□□□□ -2.04
SPG11-206ENST00000558093 PPP1R8Q12972 351 aaKnown RBP2.3□□□□□ -2.04
SPG11-206ENST00000558093 DNAJC3Q13217 504 aa2.3□□□□□ -2.04
SPG11-206ENST00000558093 NME3Q13232 169 aa2.3□□□□□ -2.04
SPG11-206ENST00000558093 IDI1Q13907 227 aa2.3□□□□□ -2.04
SPG11-206ENST00000558093 ARHGAP19Q14CB8 494 aa2.3□□□□□ -2.04
SPG11-206ENST00000558093 STK38Q15208 465 aa2.3□□□□□ -2.04
SPG11-206ENST00000558093 KYAT1Q16773 422 aa2.3□□□□□ -2.04
SPG11-206ENST00000558093 DCAF4L1Q3SXM0 396 aa2.3□□□□□ -2.04
SPG11-206ENST00000558093 Q3ZCU0 254 aa2.3□□□□□ -2.04
SPG11-206ENST00000558093 USH1GQ495M9 461 aa2.3□□□□□ -2.04
SPG11-206ENST00000558093 CMPK2Q5EBM0 449 aa2.3□□□□□ -2.04
SPG11-206ENST00000558093 CFAP157Q5JU67 520 aa2.3□□□□□ -2.04
SPG11-206ENST00000558093 LIN9Q5TKA1 542 aa2.3□□□□□ -2.04
SPG11-206ENST00000558093 WSCD1Q658N2 575 aa2.3□□□□□ -2.04
SPG11-206ENST00000558093 SULT1C3Q6IMI6 304 aa2.3□□□□□ -2.04
SPG11-206ENST00000558093 ZNF530Q6P9A1 599 aaPredicted RBP2.3□□□□□ -2.04
SPG11-206ENST00000558093 METAP1DQ6UB28 335 aaPredicted RBP2.3□□□□□ -2.04
SPG11-206ENST00000558093 TFAP2EQ6VUC0 442 aa2.3□□□□□ -2.04
SPG11-206ENST00000558093 ERO1BQ86YB8 467 aa2.3□□□□□ -2.04
SPG11-206ENST00000558093 GRAMD2AQ8IUY3 354 aa2.3□□□□□ -2.04
SPG11-206ENST00000558093 EFCAB13Q8IY85 973 aa2.3□□□□□ -2.04
SPG11-206ENST00000558093 CENPSQ8N2Z9 138 aa2.3□□□□□ -2.04
SPG11-206ENST00000558093 RNF175Q8N4F7 328 aa2.3□□□□□ -2.04
SPG11-206ENST00000558093 ARFGAP2Q8N6H7 521 aa2.3□□□□□ -2.04
SPG11-206ENST00000558093 CCNYQ8ND76 341 aa2.3□□□□□ -2.04
SPG11-206ENST00000558093 SLC22A8Q8TCC7 542 aa2.3□□□□□ -2.04
SPG11-206ENST00000558093 TMEM37Q8WXS4 190 aa2.3□□□□□ -2.04
SPG11-206ENST00000558093 KIAA1143Q96AT1 154 aaPredicted RBP2.3□□□□□ -2.04
SPG11-206ENST00000558093 C16orf74Q96GX8 76 aa2.3□□□□□ -2.04
SPG11-206ENST00000558093 MSANTD3Q96H12 275 aa2.3□□□□□ -2.04
SPG11-206ENST00000558093 IMMP1LQ96LU5 166 aa2.3□□□□□ -2.04
SPG11-206ENST00000558093 RPRD1AQ96P16 312 aaPredicted RBP2.3□□□□□ -2.04
SPG11-206ENST00000558093 DEFB118Q96PH6 123 aa2.3□□□□□ -2.04
SPG11-206ENST00000558093 PANX2Q96RD6 677 aa2.3□□□□□ -2.04
SPG11-206ENST00000558093 ZBTB18Q99592 522 aa2.3□□□□□ -2.04
SPG11-206ENST00000558093 C19orf24Q9BVV8 132 aa2.3□□□□□ -2.04
SPG11-206ENST00000558093 TPPP3Q9BW30 176 aa2.3□□□□□ -2.04
SPG11-206ENST00000558093 TSSK1BQ9BXA7 367 aa2.3□□□□□ -2.04
SPG11-206ENST00000558093 MRPL37Q9BZE1 423 aaKnown RBP2.3□□□□□ -2.04
SPG11-206ENST00000558093 TMEM245Q9H330 911 aa2.3□□□□□ -2.04
SPG11-206ENST00000558093 EXOSC3Q9NQT5 275 aaKnown RBP2.3□□□□□ -2.04
SPG11-206ENST00000558093 PIGVQ9NUD9 493 aa2.3□□□□□ -2.04
SPG11-206ENST00000558093 AGPAT5Q9NUQ2 364 aa2.3□□□□□ -2.04
SPG11-206ENST00000558093 EMC3Q9P0I2 261 aa2.3□□□□□ -2.04
SPG11-206ENST00000558093 NDUFA13Q9P0J0 144 aa2.3□□□□□ -2.04
SPG11-206ENST00000558093 DNPEPQ9ULA0 475 aa2.3□□□□□ -2.04
SPG11-206ENST00000558093 KIAA1257Q9ULG3 409 aa2.3□□□□□ -2.04
SPG11-206ENST00000558093 PDE10AQ9Y233 779 aa2.3□□□□□ -2.04
SPG11-206ENST00000558093 ATP6V1DQ9Y5K8 247 aa2.3□□□□□ -2.04
SPG11-206ENST00000558093 PEG3Q9GZU2 1588 aa2.3□□□□□ -2.04
SPG11-206ENST00000558093 OBSCNQ5VST9 7968 aa2.3□□□□□ -2.04
SPG11-206ENST00000558093 SBNO1A3KN83 1393 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms