RNA–Protein interactions for RNA: ENST00000556633.5

GPHN-214, Transcript of gephyrin, humanhuman

TSL 3

Gene GPHN, Length 512 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-214ENST00000556633 SIGLEC12Q96PQ1 595 aa2.83□□□□□ -1.96
GPHN-214ENST00000556633 SLC30A2Q9BRI3 323 aa2.83□□□□□ -1.96
GPHN-214ENST00000556633 SPZ1Q9BXG8 430 aa2.83□□□□□ -1.96
GPHN-214ENST00000556633 NSRP1Q9H0G5 558 aaKnown RBP2.83□□□□□ -1.96
GPHN-214ENST00000556633 RIBC2Q9H4K1 309 aa2.83□□□□□ -1.96
GPHN-214ENST00000556633 C8orf33Q9H7E9 229 aaPredicted RBP2.83□□□□□ -1.96
GPHN-214ENST00000556633 PALMDQ9NP74 551 aa2.83□□□□□ -1.96
GPHN-214ENST00000556633 PNO1Q9NRX1 252 aaKnown RBP2.83□□□□□ -1.96
GPHN-214ENST00000556633 SLC7A10Q9NS82 523 aa2.83□□□□□ -1.96
GPHN-214ENST00000556633 MRPL39Q9NYK5 338 aaKnown RBP2.83□□□□□ -1.96
GPHN-214ENST00000556633 DPM3Q9P2X0 92 aa2.83□□□□□ -1.96
GPHN-214ENST00000556633 EXTL2Q9UBQ6 330 aa2.83□□□□□ -1.96
GPHN-214ENST00000556633 CRLS1Q9UJA2 301 aa2.83□□□□□ -1.96
GPHN-214ENST00000556633 SF3B1O75533 1304 aaKnown RBP eCLIP2.83□□□□□ -1.964e-6■■■■■ 120.3
GPHN-214ENST00000556633 MAP3K19Q56UN5 1328 aa2.83□□□□□ -1.96
GPHN-214ENST00000556633 RPAP1Q9BWH6 1393 aaPredicted RBP2.83□□□□□ -1.96
GPHN-214ENST00000556633 BAZ1BQ9UIG0 1483 aaKnown RBP2.83□□□□□ -1.96
GPHN-214ENST00000556633 PPIAL4CA0A0B4J2A2 164 aa2.82□□□□□ -1.96
GPHN-214ENST00000556633 IQANK1A0A1B0GTG1 560 aa2.82□□□□□ -1.96
GPHN-214ENST00000556633 GOLGA6L10A6NI86 522 aa2.82□□□□□ -1.96
GPHN-214ENST00000556633 FAM220BPB1ANY3 271 aa2.82□□□□□ -1.96
GPHN-214ENST00000556633 NDUFAB1O14561 156 aa2.82□□□□□ -1.96
GPHN-214ENST00000556633 PHOX2AO14813 284 aa2.82□□□□□ -1.96
GPHN-214ENST00000556633 LSM1O15116 133 aaKnown RBP2.82□□□□□ -1.96
GPHN-214ENST00000556633 STX7O15400 261 aaKnown RBP2.82□□□□□ -1.96
GPHN-214ENST00000556633 EFNA2O43921 213 aa2.82□□□□□ -1.96
GPHN-214ENST00000556633 SRSF10O75494 262 aaKnown RBP2.82□□□□□ -1.96
GPHN-214ENST00000556633 IDH1O75874 414 aaKnown RBP2.82□□□□□ -1.96
GPHN-214ENST00000556633 SNX4O95219 450 aa2.82□□□□□ -1.96
GPHN-214ENST00000556633 PPIAL4GP0DN37 164 aa2.82□□□□□ -1.96
GPHN-214ENST00000556633 IGHV1-2P23083 117 aa2.82□□□□□ -1.96
GPHN-214ENST00000556633 FASP25445 335 aa2.82□□□□□ -1.96
GPHN-214ENST00000556633 ATP5A1P25705 553 aaKnown RBP2.82□□□□□ -1.96
GPHN-214ENST00000556633 PRKAR2BP31323 418 aa2.82□□□□□ -1.96
GPHN-214ENST00000556633 CCT6AP40227 531 aaKnown RBP2.82□□□□□ -1.96
GPHN-214ENST00000556633 MDH2P40926 338 aaKnown RBP2.82□□□□□ -1.96
GPHN-214ENST00000556633 EPS15P42566 896 aa2.82□□□□□ -1.96
GPHN-214ENST00000556633 RND3P61587 244 aa2.82□□□□□ -1.96
GPHN-214ENST00000556633 BDH1Q02338 343 aa2.82□□□□□ -1.96
GPHN-214ENST00000556633 RGS1Q08116 209 aa2.82□□□□□ -1.96
GPHN-214ENST00000556633 CD47Q08722 323 aa2.82□□□□□ -1.96
GPHN-214ENST00000556633 ASAH1Q13510 395 aa2.82□□□□□ -1.96
GPHN-214ENST00000556633 ATXN7L3Q14CW9 347 aaPredicted RBP2.82□□□□□ -1.96
GPHN-214ENST00000556633 BCL2A1Q16548 175 aa2.82□□□□□ -1.96
GPHN-214ENST00000556633 GLYR1Q49A26 553 aaPredicted RBP2.82□□□□□ -1.96
GPHN-214ENST00000556633 SLC22A10Q63ZE4 541 aa2.82□□□□□ -1.96
GPHN-214ENST00000556633 THOC7Q6I9Y2 204 aaKnown RBP2.82□□□□□ -1.96
GPHN-214ENST00000556633 OR8G2PQ6IF36 304 aa2.82□□□□□ -1.96
GPHN-214ENST00000556633 KIAA1328Q86T90 577 aa2.82□□□□□ -1.96
GPHN-214ENST00000556633 TMEM17Q86X19 198 aa2.82□□□□□ -1.96
GPHN-214ENST00000556633 C9orf40Q8IXQ3 194 aa2.82□□□□□ -1.96
GPHN-214ENST00000556633 ZNF540Q8NDQ6 660 aa2.82□□□□□ -1.96
GPHN-214ENST00000556633 FBXO30Q8TB52 745 aa2.82□□□□□ -1.96
GPHN-214ENST00000556633 CNIH3Q8TBE1 160 aa2.82□□□□□ -1.96
GPHN-214ENST00000556633 NANPQ8TBE9 248 aa2.82□□□□□ -1.96
GPHN-214ENST00000556633 THRSPQ92748 146 aa2.82□□□□□ -1.96
GPHN-214ENST00000556633 TMEM80Q96HE8 168 aa2.82□□□□□ -1.96
GPHN-214ENST00000556633 CNDP1Q96KN2 507 aa2.82□□□□□ -1.96
GPHN-214ENST00000556633 CASD1Q96PB1 797 aa2.82□□□□□ -1.96
GPHN-214ENST00000556633 MTMR9Q96QG7 549 aa2.82□□□□□ -1.96
GPHN-214ENST00000556633 PSKH2Q96QS6 385 aa2.82□□□□□ -1.96
GPHN-214ENST00000556633 TSSK1BQ9BXA7 367 aa2.82□□□□□ -1.96
GPHN-214ENST00000556633 NT5C3AQ9H0P0 336 aa2.82□□□□□ -1.96
GPHN-214ENST00000556633 GLT8D2Q9H1C3 349 aa2.82□□□□□ -1.96
GPHN-214ENST00000556633 VPS37BQ9H9H4 285 aa2.82□□□□□ -1.96
GPHN-214ENST00000556633 BATF3Q9NR55 127 aa2.82□□□□□ -1.96
GPHN-214ENST00000556633 AATFQ9NY61 560 aaKnown RBP eCLIP2.82□□□□□ -1.96
GPHN-214ENST00000556633 ANAPC7Q9UJX3 599 aa2.82□□□□□ -1.96
GPHN-214ENST00000556633 CAB39Q9Y376 341 aaPredicted RBP2.82□□□□□ -1.96
GPHN-214ENST00000556633 MROH5Q6ZUA9 1318 aa2.82□□□□□ -1.96
GPHN-214ENST00000556633 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP2.82□□□□□ -1.96
GPHN-214ENST00000556633 COL2A1P02458 1487 aaPredicted RBP2.82□□□□□ -1.96
GPHN-214ENST00000556633 CHD4Q14839 1912 aa2.81□□□□□ -1.96
GPHN-214ENST00000556633 ATRXP46100 2492 aa2.81□□□□□ -1.96
GPHN-214ENST00000556633 ESYT2A0FGR8 921 aa2.81□□□□□ -1.96
GPHN-214ENST00000556633 GSAPA4D1B5 854 aa2.81□□□□□ -1.96
GPHN-214ENST00000556633 OR5K4A6NMS3 321 aa2.81□□□□□ -1.96
GPHN-214ENST00000556633 E9PLD3 99 aa2.81□□□□□ -1.96
GPHN-214ENST00000556633 CETN3O15182 167 aa2.81□□□□□ -1.96
GPHN-214ENST00000556633 SULT1B1O43704 296 aa2.81□□□□□ -1.96
GPHN-214ENST00000556633 UFL1O94874 794 aa2.81□□□□□ -1.96
GPHN-214ENST00000556633 OPN1LWP04000 364 aa2.81□□□□□ -1.96
GPHN-214ENST00000556633 OPN1MWP04001 364 aa2.81□□□□□ -1.96
GPHN-214ENST00000556633 KRT8P05787 483 aa2.81□□□□□ -1.96
GPHN-214ENST00000556633 CD55P08174 381 aa2.81□□□□□ -1.96
GPHN-214ENST00000556633 HBQ1P09105 142 aa2.81□□□□□ -1.96
GPHN-214ENST00000556633 OPN1MW2P0DN77 364 aa2.81□□□□□ -1.96
GPHN-214ENST00000556633 OPN1MW3P0DN78 364 aa2.81□□□□□ -1.96
GPHN-214ENST00000556633 DRD5P21918 477 aa2.81□□□□□ -1.96
GPHN-214ENST00000556633 SOX6P35712 828 aa2.81□□□□□ -1.96
GPHN-214ENST00000556633 BDKRB1P46663 353 aa2.81□□□□□ -1.96
GPHN-214ENST00000556633 HAAOP46952 286 aa2.81□□□□□ -1.96
GPHN-214ENST00000556633 KRTAP10-12P60413 245 aa2.81□□□□□ -1.96
GPHN-214ENST00000556633 GBE1Q04446 702 aa2.81□□□□□ -1.96
GPHN-214ENST00000556633 ZNF154Q13106 437 aa2.81□□□□□ -1.96
GPHN-214ENST00000556633 KCNJ11Q14654 390 aa2.81□□□□□ -1.96
GPHN-214ENST00000556633 MAPRE2Q15555 327 aa2.81□□□□□ -1.96
GPHN-214ENST00000556633 TPD52L1Q16890 204 aaPredicted RBP2.81□□□□□ -1.96
GPHN-214ENST00000556633 SLC36A3Q495N2 470 aa2.81□□□□□ -1.96
GPHN-214ENST00000556633 FAM120AOSQ5T036 256 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms