RNA–Protein interactions for RNA: ENST00000556083.1

ACTN1-216, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 4,674 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-216ENST00000556083 PEAK1Q9H792 1746 aa10.06□□□□□ -0.8
ACTN1-216ENST00000556083 ZNF142P52746 1687 aaPredicted RBP10.06□□□□□ -0.8
ACTN1-216ENST00000556083 TRAV6A0A075B6T7 132 aa10.06□□□□□ -0.8
ACTN1-216ENST00000556083 TMEM212A6NML5 194 aa10.06□□□□□ -0.8
ACTN1-216ENST00000556083 CACNG3O60359 315 aa10.06□□□□□ -0.8
ACTN1-216ENST00000556083 HTR3BO95264 441 aa10.06□□□□□ -0.8
ACTN1-216ENST00000556083 MT-ATP6P00846 226 aa10.06□□□□□ -0.8
ACTN1-216ENST00000556083 IL3RAP26951 378 aa10.06□□□□□ -0.8
ACTN1-216ENST00000556083 CX3CR1P49238 355 aa10.06□□□□□ -0.8
ACTN1-216ENST00000556083 CDK5R2Q13319 367 aa10.06□□□□□ -0.8
ACTN1-216ENST00000556083 LRRTM3Q86VH5 581 aa10.06□□□□□ -0.8
ACTN1-216ENST00000556083 CPOQ8IVL8 374 aa10.06□□□□□ -0.8
ACTN1-216ENST00000556083 OR56B1Q8NGI3 324 aa10.06□□□□□ -0.8
ACTN1-216ENST00000556083 WDR20Q8TBZ3 569 aa10.06□□□□□ -0.8
ACTN1-216ENST00000556083 TRMT10AQ8TBZ6 339 aaKnown RBP10.06□□□□□ -0.8
ACTN1-216ENST00000556083 BRIX1Q8TDN6 353 aaKnown RBP10.06□□□□□ -0.8
ACTN1-216ENST00000556083 HLA-CQ95604 372 aa10.06□□□□□ -0.8
ACTN1-216ENST00000556083 TOE1Q96GM8 510 aaKnown RBP10.06□□□□□ -0.8
ACTN1-216ENST00000556083 OR5B2Q96R09 309 aa10.06□□□□□ -0.8
ACTN1-216ENST00000556083 PLEKHJ1Q9NW61 149 aa10.06□□□□□ -0.8
ACTN1-216ENST00000556083 PAQR5Q9NXK6 330 aaPredicted RBP10.06□□□□□ -0.8
ACTN1-216ENST00000556083 BABAM2Q9NXR7 383 aa10.06□□□□□ -0.8
ACTN1-216ENST00000556083 TRAV18A0A075B6X5 111 aa10.06□□□□□ -0.8
ACTN1-216ENST00000556083 TCRBV3S1A0A5B6 114 aa10.06□□□□□ -0.8
ACTN1-216ENST00000556083 CD300LBA8K4G0 201 aa10.06□□□□□ -0.8
ACTN1-216ENST00000556083 ZNF264O43296 627 aa10.06□□□□□ -0.8
ACTN1-216ENST00000556083 VAMP5O95183 116 aa10.06□□□□□ -0.8
ACTN1-216ENST00000556083 ACP2P11117 423 aa10.06□□□□□ -0.8
ACTN1-216ENST00000556083 TAS2R30P59541 319 aa10.06□□□□□ -0.8
ACTN1-216ENST00000556083 KCNJ10P78508 379 aa10.06□□□□□ -0.8
ACTN1-216ENST00000556083 TNFRSF17Q02223 184 aa10.06□□□□□ -0.8
ACTN1-216ENST00000556083 PPP1R8Q12972 351 aaKnown RBP10.06□□□□□ -0.8
ACTN1-216ENST00000556083 DNASE1L3Q13609 305 aa10.06□□□□□ -0.8
ACTN1-216ENST00000556083 SLC35D3Q5M8T2 416 aa10.06□□□□□ -0.8
ACTN1-216ENST00000556083 CARD17Q5XLA6 110 aa10.06□□□□□ -0.8
ACTN1-216ENST00000556083 TRAPPC6BQ86SZ2 158 aa10.06□□□□□ -0.8
ACTN1-216ENST00000556083 CLECL1Q8IZS7 167 aa10.06□□□□□ -0.8
ACTN1-216ENST00000556083 OR8K3Q8NH51 312 aa10.06□□□□□ -0.8
ACTN1-216ENST00000556083 NETO1Q8TDF5 533 aa10.06□□□□□ -0.8
ACTN1-216ENST00000556083 EDAQ92838 391 aa10.06□□□□□ -0.8
ACTN1-216ENST00000556083 RADILQ96JH8 1075 aa10.06□□□□□ -0.8
ACTN1-216ENST00000556083 ZNF597Q96LX8 424 aa10.06□□□□□ -0.8
ACTN1-216ENST00000556083 FZD3Q9NPG1 666 aa10.06□□□□□ -0.8
ACTN1-216ENST00000556083 AGPAT4Q9NRZ5 378 aa10.06□□□□□ -0.8
ACTN1-216ENST00000556083 GIMAP2Q9UG22 337 aa10.06□□□□□ -0.8
ACTN1-216ENST00000556083 PCDHGA6Q9Y5G7 932 aa10.06□□□□□ -0.8
ACTN1-216ENST00000556083 ADAMTSL3P82987 1691 aa10.06□□□□□ -0.8
ACTN1-216ENST00000556083 TRIM64BA6NI03 449 aa10.06□□□□□ -0.8
ACTN1-216ENST00000556083 HSPB2A8KAH6 182 aa10.06□□□□□ -0.8
ACTN1-216ENST00000556083 CDK1P06493 297 aa10.06□□□□□ -0.8
ACTN1-216ENST00000556083 CKMT1AP12532 417 aa10.06□□□□□ -0.8
ACTN1-216ENST00000556083 OPRD1P41143 372 aa10.06□□□□□ -0.8
ACTN1-216ENST00000556083 VEGFBP49765 207 aa10.06□□□□□ -0.8
ACTN1-216ENST00000556083 HSPB2Q16082 182 aa10.06□□□□□ -0.8
ACTN1-216ENST00000556083 ODF4Q2M2E3 257 aa10.06□□□□□ -0.8
ACTN1-216ENST00000556083 ARRDC2Q8TBH0 407 aa10.06□□□□□ -0.8
ACTN1-216ENST00000556083 GLYATL2Q8WU03 294 aa10.06□□□□□ -0.8
ACTN1-216ENST00000556083 TMEM40Q8WWA1 233 aa10.06□□□□□ -0.8
ACTN1-216ENST00000556083 NEIL2Q969S2 332 aa10.06□□□□□ -0.8
ACTN1-216ENST00000556083 ZNF285Q96NJ3 590 aa10.06□□□□□ -0.8
ACTN1-216ENST00000556083 TLCD2A6NGC4 264 aa10.05□□□□□ -0.8
ACTN1-216ENST00000556083 EIF4E2O60573 245 aaKnown RBP10.05□□□□□ -0.8
ACTN1-216ENST00000556083 RGS11O94810 467 aa10.05□□□□□ -0.8
ACTN1-216ENST00000556083 PPP1R3DO95685 299 aa10.05□□□□□ -0.8
ACTN1-216ENST00000556083 STATHP02808 62 aa10.05□□□□□ -0.8
ACTN1-216ENST00000556083 OR2T7P0C7T2 308 aa10.05□□□□□ -0.8
ACTN1-216ENST00000556083 FCGR2AP12318 317 aa10.05□□□□□ -0.8
ACTN1-216ENST00000556083 CERS1P27544 350 aa10.05□□□□□ -0.8
ACTN1-216ENST00000556083 PRKAR1BP31321 381 aa10.05□□□□□ -0.8
ACTN1-216ENST00000556083 CD97P48960 835 aa10.05□□□□□ -0.8
ACTN1-216ENST00000556083 RPS23P62266 143 aaKnown RBP10.05□□□□□ -0.8
ACTN1-216ENST00000556083 LSAMPQ13449 338 aa10.05□□□□□ -0.8
ACTN1-216ENST00000556083 SLC36A2Q495M3 483 aa10.05□□□□□ -0.8
ACTN1-216ENST00000556083 FRMPD2BQ6IN97 320 aa10.05□□□□□ -0.8
ACTN1-216ENST00000556083 DTWD1Q8N5C7 304 aa10.05□□□□□ -0.8
ACTN1-216ENST00000556083 METTL27Q8N6F8 245 aaPredicted RBP10.05□□□□□ -0.8
ACTN1-216ENST00000556083 ZNF611Q8N823 705 aa10.05□□□□□ -0.8
ACTN1-216ENST00000556083 OR2T27Q8NH04 317 aa10.05□□□□□ -0.8
ACTN1-216ENST00000556083 UBL7Q96S82 380 aaPredicted RBP10.05□□□□□ -0.8
ACTN1-216ENST00000556083 SYT11Q9BT88 431 aa10.05□□□□□ -0.8
ACTN1-216ENST00000556083 SEMA4CQ9C0C4 833 aa10.05□□□□□ -0.8
ACTN1-216ENST00000556083 EIF5A2Q9GZV4 153 aaKnown RBP10.05□□□□□ -0.8
ACTN1-216ENST00000556083 METTL9Q9H1A3 318 aa10.05□□□□□ -0.8
ACTN1-216ENST00000556083 KCNK12Q9HB15 430 aa10.05□□□□□ -0.8
ACTN1-216ENST00000556083 ZNF286AQ9HBT8 521 aa10.05□□□□□ -0.8
ACTN1-216ENST00000556083 THSD1Q9NS62 852 aa10.05□□□□□ -0.8
ACTN1-216ENST00000556083 METTL15A6NJ78 407 aa10.05□□□□□ -0.8
ACTN1-216ENST00000556083 TARM1B6A8C7 271 aa10.05□□□□□ -0.8
ACTN1-216ENST00000556083 F5H5P2 479 aa10.05□□□□□ -0.8
ACTN1-216ENST00000556083 TRAPPC2LH3BP13 241 aa10.05□□□□□ -0.8
ACTN1-216ENST00000556083 J3QRK9 145 aa10.05□□□□□ -0.8
ACTN1-216ENST00000556083 AQP9O43315 295 aa10.05□□□□□ -0.8
ACTN1-216ENST00000556083 MED6O75586 246 aa10.05□□□□□ -0.8
ACTN1-216ENST00000556083 TSPAN15O95858 294 aa10.05□□□□□ -0.8
ACTN1-216ENST00000556083 TK1P04183 234 aa10.05□□□□□ -0.8
ACTN1-216ENST00000556083 AFF3P51826 1226 aaKnown RBP10.05□□□□□ -0.8
ACTN1-216ENST00000556083 ZNF252P-AS1Q0IIN9 211 aa10.05□□□□□ -0.8
ACTN1-216ENST00000556083 ZMAT1Q5H9K5 638 aa10.05□□□□□ -0.8
ACTN1-216ENST00000556083 AADACL4Q5VUY2 407 aa10.05□□□□□ -0.8
ACTN1-216ENST00000556083 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.05□□□□□ -0.81e-6■■□□□ 12.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms