RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-221ENST00000555773 A0A087WZY1 265 aa11.35□□□□□ -0.59
SHMT2-221ENST00000555773 A0A0G2JMM0 328 aa11.35□□□□□ -0.59
SHMT2-221ENST00000555773 A0A1W2PPB8 328 aa11.35□□□□□ -0.59
SHMT2-221ENST00000555773 A0A1W2PRS3 328 aa11.35□□□□□ -0.59
SHMT2-221ENST00000555773 TCRBV3S1A0A5B6 114 aa11.35□□□□□ -0.59
SHMT2-221ENST00000555773 PINLYPA6NC86 204 aa11.35□□□□□ -0.59
SHMT2-221ENST00000555773 ANKUB1A6NFN9 424 aa11.35□□□□□ -0.59
SHMT2-221ENST00000555773 LRRC3CA6NJW4 275 aa11.35□□□□□ -0.59
SHMT2-221ENST00000555773 KIR3DP1A8MWS1 328 aa11.35□□□□□ -0.59
SHMT2-221ENST00000555773 GLSO94925 669 aaPredicted RBP11.35□□□□□ -0.59
SHMT2-221ENST00000555773 GPIP06744 558 aa11.35□□□□□ -0.59
SHMT2-221ENST00000555773 ACAA2P42765 397 aaKnown RBP11.35□□□□□ -0.59
SHMT2-221ENST00000555773 RNF144AP50876 292 aaPredicted RBP11.35□□□□□ -0.59
SHMT2-221ENST00000555773 DSCR4P56555 118 aaPredicted RBP11.35□□□□□ -0.59
SHMT2-221ENST00000555773 ACTR3P61158 418 aa11.35□□□□□ -0.59
SHMT2-221ENST00000555773 COPZ1P61923 177 aa11.35□□□□□ -0.59
SHMT2-221ENST00000555773 PLGLB1Q02325 96 aa11.35□□□□□ -0.59
SHMT2-221ENST00000555773 PLAURQ03405 335 aa11.35□□□□□ -0.59
SHMT2-221ENST00000555773 KLRB1Q12918 225 aa11.35□□□□□ -0.59
SHMT2-221ENST00000555773 EPS8Q12929 822 aa11.35□□□□□ -0.59
SHMT2-221ENST00000555773 GANABQ14697 944 aaKnown RBP11.35□□□□□ -0.59
SHMT2-221ENST00000555773 GLYR1Q49A26 553 aaPredicted RBP11.35□□□□□ -0.59
SHMT2-221ENST00000555773 FAM98BQ52LJ0 330 aaKnown RBP11.35□□□□□ -0.59
SHMT2-221ENST00000555773 SLC6A19Q695T7 634 aa11.35□□□□□ -0.59
SHMT2-221ENST00000555773 VTCN1Q7Z7D3 282 aa11.35□□□□□ -0.59
SHMT2-221ENST00000555773 RANBP3LQ86VV4 465 aaPredicted RBP11.35□□□□□ -0.59
SHMT2-221ENST00000555773 SLC22A16Q86VW1 577 aa11.35□□□□□ -0.59
SHMT2-221ENST00000555773 SPATA24Q86W54 205 aa11.35□□□□□ -0.59
SHMT2-221ENST00000555773 CARM1Q86X55 608 aa11.35□□□□□ -0.59
SHMT2-221ENST00000555773 LSM14AQ8ND56 463 aaKnown RBP11.35□□□□□ -0.59
SHMT2-221ENST00000555773 GPR119Q8TDV5 335 aa11.35□□□□□ -0.59
SHMT2-221ENST00000555773 SH3YL1Q96HL8 342 aaPredicted RBP11.35□□□□□ -0.59
SHMT2-221ENST00000555773 TRIM2Q9C040 744 aa11.35□□□□□ -0.59
SHMT2-221ENST00000555773 MAGIXQ9H6Y5 334 aa11.35□□□□□ -0.59
SHMT2-221ENST00000555773 C15orf41Q9Y2V0 281 aa11.35□□□□□ -0.59
SHMT2-221ENST00000555773 USP24Q9UPU5 2620 aa11.35□□□□□ -0.59
SHMT2-221ENST00000555773 SPTA1P02549 2419 aa11.34□□□□□ -0.59
SHMT2-221ENST00000555773 DHRS12A0PJE2 317 aa11.34□□□□□ -0.59
SHMT2-221ENST00000555773 FAM47E-STBD1D6RA91 191 aa11.34□□□□□ -0.59
SHMT2-221ENST00000555773 ACOT7O00154 380 aa11.34□□□□□ -0.59
SHMT2-221ENST00000555773 AP3D1O14617 1153 aa11.34□□□□□ -0.59
SHMT2-221ENST00000555773 OIP5O43482 229 aa11.34□□□□□ -0.59
SHMT2-221ENST00000555773 BCAS1O75363 584 aaPredicted RBP11.34□□□□□ -0.59
SHMT2-221ENST00000555773 CRYABP02511 175 aaKnown RBP11.34□□□□□ -0.59
SHMT2-221ENST00000555773 IFNW1P05000 195 aa11.34□□□□□ -0.59
SHMT2-221ENST00000555773 GKN3PP0CG01 181 aa11.34□□□□□ -0.59
SHMT2-221ENST00000555773 ITGA2P17301 1181 aa11.34□□□□□ -0.59
SHMT2-221ENST00000555773 SRD5A2P31213 254 aa11.34□□□□□ -0.59
SHMT2-221ENST00000555773 RYKP34925 604 aa11.34□□□□□ -0.59
SHMT2-221ENST00000555773 ZNF41P51814 821 aaPredicted RBP11.34□□□□□ -0.59
SHMT2-221ENST00000555773 ZNF136P52737 540 aa11.34□□□□□ -0.59
SHMT2-221ENST00000555773 RGS8P57771 180 aaPredicted RBP11.34□□□□□ -0.59
SHMT2-221ENST00000555773 PPIAP62937 165 aaKnown RBP11.34□□□□□ -0.59
SHMT2-221ENST00000555773 CHRNB3Q05901 458 aa11.34□□□□□ -0.59
SHMT2-221ENST00000555773 INPP5JQ15735 1006 aaPredicted RBP11.34□□□□□ -0.59
SHMT2-221ENST00000555773 NDUFAF6Q330K2 333 aa11.34□□□□□ -0.59
SHMT2-221ENST00000555773 ENPP6Q6UWR7 440 aa11.34□□□□□ -0.59
SHMT2-221ENST00000555773 COMTD1Q86VU5 262 aa11.34□□□□□ -0.59
SHMT2-221ENST00000555773 TMCO5AQ8N6Q1 288 aa11.34□□□□□ -0.59
SHMT2-221ENST00000555773 LSMEM1Q8N8F7 131 aa11.34□□□□□ -0.59
SHMT2-221ENST00000555773 OR6T1Q8NGN1 323 aa11.34□□□□□ -0.59
SHMT2-221ENST00000555773 OR10Q1Q8NGQ4 319 aa11.34□□□□□ -0.59
SHMT2-221ENST00000555773 TMEM234Q8WY98 164 aa11.34□□□□□ -0.59
SHMT2-221ENST00000555773 NR4A3Q92570 626 aa11.34□□□□□ -0.59
SHMT2-221ENST00000555773 C1GALT1C1Q96EU7 318 aa11.34□□□□□ -0.59
SHMT2-221ENST00000555773 UBL7Q96S82 380 aaPredicted RBP11.34□□□□□ -0.59
SHMT2-221ENST00000555773 ZNF559Q9BR84 538 aa11.34□□□□□ -0.59
SHMT2-221ENST00000555773 TTTY12Q9BZ98 90 aa11.34□□□□□ -0.59
SHMT2-221ENST00000555773 POLR2J2Q9GZM3 115 aaKnown RBP11.34□□□□□ -0.59
SHMT2-221ENST00000555773 POLR2J3Q9H1A7 115 aaKnown RBP11.34□□□□□ -0.59
SHMT2-221ENST00000555773 UBQLN3Q9H347 655 aa11.34□□□□□ -0.59
SHMT2-221ENST00000555773 TMEM27Q9HBJ8 222 aa11.34□□□□□ -0.59
SHMT2-221ENST00000555773 IL1RAPQ9NPH3 570 aa11.34□□□□□ -0.59
SHMT2-221ENST00000555773 TESQ9UGI8 421 aaKnown RBP11.34□□□□□ -0.59
SHMT2-221ENST00000555773 ANAPC2Q9UJX6 822 aa11.34□□□□□ -0.59
SHMT2-221ENST00000555773 FBXL2Q9UKC9 423 aa11.34□□□□□ -0.59
SHMT2-221ENST00000555773 LHX6Q9UPM6 363 aa11.34□□□□□ -0.59
SHMT2-221ENST00000555773 PIEZO2Q9H5I5 2752 aa11.34□□□□□ -0.59
SHMT2-221ENST00000555773 C17orf51A8MQB3 221 aa11.33□□□□□ -0.6
SHMT2-221ENST00000555773 M0R3H8 397 aa11.33□□□□□ -0.6
SHMT2-221ENST00000555773 ETV2O00321 342 aaPredicted RBP11.33□□□□□ -0.6
SHMT2-221ENST00000555773 NUDT14O95848 222 aa11.33□□□□□ -0.6
SHMT2-221ENST00000555773 SEMG1P04279 462 aa11.33□□□□□ -0.6
SHMT2-221ENST00000555773 RAP2AP10114 183 aa11.33□□□□□ -0.6
SHMT2-221ENST00000555773 PRG2P13727 222 aa11.33□□□□□ -0.6
SHMT2-221ENST00000555773 PSMA4P25789 261 aaKnown RBP11.33□□□□□ -0.6
SHMT2-221ENST00000555773 DPP4P27487 766 aa11.33□□□□□ -0.6
SHMT2-221ENST00000555773 ADH6P28332 368 aa11.33□□□□□ -0.6
SHMT2-221ENST00000555773 IFNA8P32881 189 aa11.33□□□□□ -0.6
SHMT2-221ENST00000555773 EIF1P41567 113 aaKnown RBP11.33□□□□□ -0.6
SHMT2-221ENST00000555773 SLC1A3P43003 542 aa11.33□□□□□ -0.6
SHMT2-221ENST00000555773 OR1E2P47887 323 aa11.33□□□□□ -0.6
SHMT2-221ENST00000555773 IDH2P48735 452 aaKnown RBP11.33□□□□□ -0.6
SHMT2-221ENST00000555773 CCR4P51679 360 aa11.33□□□□□ -0.6
SHMT2-221ENST00000555773 DLX5P56178 289 aa11.33□□□□□ -0.6
SHMT2-221ENST00000555773 SLC10A1Q14973 349 aa11.33□□□□□ -0.6
SHMT2-221ENST00000555773 NADK2Q4G0N4 442 aa11.33□□□□□ -0.6
SHMT2-221ENST00000555773 WBP2NLQ6ICG8 309 aa11.33□□□□□ -0.6
SHMT2-221ENST00000555773 PCSK4Q6UW60 755 aa11.33□□□□□ -0.6
SHMT2-221ENST00000555773 PIWIL3Q7Z3Z3 882 aaKnown RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms