RNA–Protein interactions for RNA: ENST00000553917.5

RALGAPA1-205, Transcript of Ral GTPase activating protein catalytic alpha subunit 1, human

TSL 3

Gene RALGAPA1, Length 723 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RALGAPA1-205	ENST00000553917	OR5B2	Q96R09	309 aa		2.59	□□□□□ -1.99
RALGAPA1-205	ENST00000553917	NODAL	Q96S42	347 aa		2.59	□□□□□ -1.99
RALGAPA1-205	ENST00000553917	ATF6B	Q99941	703 aa		2.59	□□□□□ -1.99
RALGAPA1-205	ENST00000553917	CITED1	Q99966	193 aa		2.59	□□□□□ -1.99
RALGAPA1-205	ENST00000553917	C11orf70	Q9BRQ4	267 aa		2.59	□□□□□ -1.99
RALGAPA1-205	ENST00000553917	NIPSNAP3B	Q9BS92	247 aa		2.59	□□□□□ -1.99
RALGAPA1-205	ENST00000553917	AMBN	Q9NP70	447 aa		2.59	□□□□□ -1.99
RALGAPA1-205	ENST00000553917	POLE4	Q9NR33	117 aa		2.59	□□□□□ -1.99
RALGAPA1-205	ENST00000553917	NANS	Q9NR45	359 aa		2.59	□□□□□ -1.99
RALGAPA1-205	ENST00000553917	NUDT15	Q9NV35	164 aa		2.59	□□□□□ -1.99
RALGAPA1-205	ENST00000553917	EHF	Q9NZC4	300 aa		2.59	□□□□□ -1.99
RALGAPA1-205	ENST00000553917	MLX	Q9UH92	298 aa		2.59	□□□□□ -1.99
RALGAPA1-205	ENST00000553917	KIAA1257	Q9ULG3	409 aa		2.59	□□□□□ -1.99
RALGAPA1-205	ENST00000553917	SPATA2	Q9UM82	520 aa		2.59	□□□□□ -1.99
RALGAPA1-205	ENST00000553917	ABCG2	Q9UNQ0	655 aa		2.59	□□□□□ -1.99
RALGAPA1-205	ENST00000553917	GAB2	Q9UQC2	676 aa		2.59	□□□□□ -1.99
RALGAPA1-205	ENST00000553917	NTNG1	Q9Y2I2	539 aa		2.59	□□□□□ -1.99
RALGAPA1-205	ENST00000553917	MEMO1	Q9Y316	297 aa		2.59	□□□□□ -1.99
RALGAPA1-205	ENST00000553917	AK6	Q9Y3D8	172 aa	Known RBP	2.59	□□□□□ -1.99
RALGAPA1-205	ENST00000553917	CHTOP	Q9Y3Y2	248 aa	Known RBP	2.59	□□□□□ -1.99
RALGAPA1-205	ENST00000553917	TTC41P	Q6P2S7	1318 aa		2.59	□□□□□ -2
RALGAPA1-205	ENST00000553917	RPAP1	Q9BWH6	1393 aa	Predicted RBP	2.59	□□□□□ -2
RALGAPA1-205	ENST00000553917	ARID2	Q68CP9	1835 aa		2.58	□□□□□ -2
RALGAPA1-205	ENST00000553917	IGHV3OR16-12	A0A075B7B8	117 aa		2.58	□□□□□ -2
RALGAPA1-205	ENST00000553917	ARPC4-TTLL3	A0A0A6YYG9	625 aa		2.58	□□□□□ -2
RALGAPA1-205	ENST00000553917	SMCO3	A2RU48	225 aa		2.58	□□□□□ -2
RALGAPA1-205	ENST00000553917	CCDC182	A6NF36	153 aa		2.58	□□□□□ -2
RALGAPA1-205	ENST00000553917	ACOD1	A6NK06	481 aa		2.58	□□□□□ -2
RALGAPA1-205	ENST00000553917	FOXI3	A8MTJ6	420 aa	Predicted RBP	2.58	□□□□□ -2
RALGAPA1-205	ENST00000553917		C9JVG2	144 aa		2.58	□□□□□ -2
RALGAPA1-205	ENST00000553917		K7EQG2	157 aa		2.58	□□□□□ -2
RALGAPA1-205	ENST00000553917	HAS3	O00219	553 aa		2.58	□□□□□ -2
RALGAPA1-205	ENST00000553917	FOXE1	O00358	373 aa	Predicted RBP	2.58	□□□□□ -2
RALGAPA1-205	ENST00000553917	PRKAB2	O43741	272 aa		2.58	□□□□□ -2
RALGAPA1-205	ENST00000553917	CDH16	O75309	829 aa		2.58	□□□□□ -2
RALGAPA1-205	ENST00000553917	DIRAS1	O95057	198 aa		2.58	□□□□□ -2
RALGAPA1-205	ENST00000553917	AP2A1	O95782	977 aa		2.58	□□□□□ -2
RALGAPA1-205	ENST00000553917	CRYGB	P07316	175 aa		2.58	□□□□□ -2
RALGAPA1-205	ENST00000553917	WNT2	P09544	360 aa		2.58	□□□□□ -2
RALGAPA1-205	ENST00000553917	TRIM49	P0CI25	452 aa		2.58	□□□□□ -2
RALGAPA1-205	ENST00000553917	TRIM49C	P0CI26	452 aa		2.58	□□□□□ -2
RALGAPA1-205	ENST00000553917	STAG3L3	P0CL85	134 aa		2.58	□□□□□ -2
RALGAPA1-205	ENST00000553917	RALB	P11234	206 aa		2.58	□□□□□ -2
RALGAPA1-205	ENST00000553917	RNH1	P13489	461 aa	Known RBP	2.58	□□□□□ -2
RALGAPA1-205	ENST00000553917	PVR	P15151	417 aa		2.58	□□□□□ -2
RALGAPA1-205	ENST00000553917	NCK1	P16333	377 aa		2.58	□□□□□ -2
RALGAPA1-205	ENST00000553917	NMT1	P30419	496 aa	Known RBP	2.58	□□□□□ -2
RALGAPA1-205	ENST00000553917	CASP14	P31944	242 aa		2.58	□□□□□ -2
RALGAPA1-205	ENST00000553917	CCT6A	P40227	531 aa	Known RBP	2.58	□□□□□ -2
RALGAPA1-205	ENST00000553917	CRYBB2	P43320	205 aa		2.58	□□□□□ -2
RALGAPA1-205	ENST00000553917	POU3F4	P49335	361 aa		2.58	□□□□□ -2
RALGAPA1-205	ENST00000553917	STAR	P49675	285 aa		2.58	□□□□□ -2
RALGAPA1-205	ENST00000553917	KRTAP10-3	P60369	221 aa		2.58	□□□□□ -2
RALGAPA1-205	ENST00000553917	LAGE3	Q14657	143 aa		2.58	□□□□□ -2
RALGAPA1-205	ENST00000553917	ZFP69	Q49AA0	526 aa		2.58	□□□□□ -2
RALGAPA1-205	ENST00000553917	C14orf28	Q4W4Y0	310 aa		2.58	□□□□□ -2
RALGAPA1-205	ENST00000553917	TP53I3	Q53FA7	332 aa		2.58	□□□□□ -2
RALGAPA1-205	ENST00000553917	TEX44	Q53QW1	395 aa		2.58	□□□□□ -2
RALGAPA1-205	ENST00000553917	MS4A13	Q5J8X5	152 aa		2.58	□□□□□ -2
RALGAPA1-205	ENST00000553917	LCE3A	Q5TA76	89 aa		2.58	□□□□□ -2
RALGAPA1-205	ENST00000553917	FAM219B	Q5XKK7	198 aa		2.58	□□□□□ -2
RALGAPA1-205	ENST00000553917	LRRC66	Q68CR7	880 aa		2.58	□□□□□ -2
RALGAPA1-205	ENST00000553917	ATL3	Q6DD88	541 aa		2.58	□□□□□ -2
RALGAPA1-205	ENST00000553917	ARMCX5	Q6P1M9	558 aa		2.58	□□□□□ -2
RALGAPA1-205	ENST00000553917	TPRA1	Q86W33	373 aa		2.58	□□□□□ -2
RALGAPA1-205	ENST00000553917	COMMD1	Q8N668	190 aa		2.58	□□□□□ -2
RALGAPA1-205	ENST00000553917	ALLC	Q8N6M5	410 aa		2.58	□□□□□ -2
RALGAPA1-205	ENST00000553917	AQP11	Q8NBQ7	271 aa		2.58	□□□□□ -2
RALGAPA1-205	ENST00000553917	CCDC148	Q8NFR7	591 aa		2.58	□□□□□ -2
RALGAPA1-205	ENST00000553917	OR4C5	Q8NGB2	326 aa		2.58	□□□□□ -2
RALGAPA1-205	ENST00000553917	OR52K1	Q8NGK4	314 aa		2.58	□□□□□ -2
RALGAPA1-205	ENST00000553917	FLVCR1-AS1	Q8TAF5	88 aa		2.58	□□□□□ -2
RALGAPA1-205	ENST00000553917	FAM81A	Q8TBF8	368 aa		2.58	□□□□□ -2
RALGAPA1-205	ENST00000553917	ST8SIA1	Q92185	356 aa		2.58	□□□□□ -2
RALGAPA1-205	ENST00000553917	ZNF75CP	Q92670	426 aa	Predicted RBP	2.58	□□□□□ -2
RALGAPA1-205	ENST00000553917	TAF15	Q92804	592 aa	Known RBP eCLIP	2.58	□□□□□ -2
RALGAPA1-205	ENST00000553917	BAD	Q92934	168 aa		2.58	□□□□□ -2
RALGAPA1-205	ENST00000553917	NTNG2	Q96CW9	530 aa		2.58	□□□□□ -2
RALGAPA1-205	ENST00000553917	ZNF501	Q96CX3	271 aa	Predicted RBP	2.58	□□□□□ -2
RALGAPA1-205	ENST00000553917	RAB3C	Q96E17	227 aa		2.58	□□□□□ -2
RALGAPA1-205	ENST00000553917	FBXO17	Q96EF6	278 aa		2.58	□□□□□ -2
RALGAPA1-205	ENST00000553917	MOCOS	Q96EN8	888 aa		2.58	□□□□□ -2
RALGAPA1-205	ENST00000553917	TMEM80	Q96HE8	168 aa		2.58	□□□□□ -2
RALGAPA1-205	ENST00000553917	MTMR9	Q96QG7	549 aa		2.58	□□□□□ -2
RALGAPA1-205	ENST00000553917	CLCC1	Q96S66	551 aa		2.58	□□□□□ -2
RALGAPA1-205	ENST00000553917	SLC35A5	Q9BS91	424 aa		2.58	□□□□□ -2
RALGAPA1-205	ENST00000553917	DPH7	Q9BTV6	452 aa		2.58	□□□□□ -2
RALGAPA1-205	ENST00000553917	RBM4	Q9BWF3	364 aa	Known RBP	2.58	□□□□□ -2
RALGAPA1-205	ENST00000553917	SPATA16	Q9BXB7	569 aa		2.58	□□□□□ -2
RALGAPA1-205	ENST00000553917	RAB34	Q9BZG1	259 aa		2.58	□□□□□ -2
RALGAPA1-205	ENST00000553917	IQCG	Q9H095	443 aa	Known RBP	2.58	□□□□□ -2
RALGAPA1-205	ENST00000553917	ILKAP	Q9H0C8	392 aa	Predicted RBP	2.58	□□□□□ -2
RALGAPA1-205	ENST00000553917	UPF3A	Q9H1J1	476 aa	Known RBP	2.58	□□□□□ -2
RALGAPA1-205	ENST00000553917	CLSTN2	Q9H4D0	955 aa		2.58	□□□□□ -2
RALGAPA1-205	ENST00000553917	NT5M	Q9NPB1	228 aa		2.58	□□□□□ -2
RALGAPA1-205	ENST00000553917	RPRD1B	Q9NQG5	326 aa	Known RBP	2.58	□□□□□ -2
RALGAPA1-205	ENST00000553917	FAM120C	Q9NX05	1096 aa	Known RBP	2.58	□□□□□ -2
RALGAPA1-205	ENST00000553917	KLHL28	Q9NXS3	571 aa		2.58	□□□□□ -2
RALGAPA1-205	ENST00000553917	BFAR	Q9NZS9	450 aa		2.58	□□□□□ -2
RALGAPA1-205	ENST00000553917	SENP1	Q9P0U3	644 aa		2.58	□□□□□ -2

Retrieved 100 of 20,778 RNA–protein pairs in 25 ms