RNA–Protein interactions for RNA: ENST00000553659.1

ACTN1-209, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 434 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-209ENST00000553659 HDAC2Q92769 488 aaKnown RBP14.69□□□□□ -0.06
ACTN1-209ENST00000553659 ELP4Q96EB1 424 aa14.69□□□□□ -0.06
ACTN1-209ENST00000553659 MBOAT4Q96T53 435 aa14.69□□□□□ -0.06
ACTN1-209ENST00000553659 APOL4Q9BPW4 351 aa14.69□□□□□ -0.06
ACTN1-209ENST00000553659 TREX2Q9BQ50 279 aaPredicted RBP14.69□□□□□ -0.06
ACTN1-209ENST00000553659 CACYBPQ9HB71 228 aaKnown RBP14.69□□□□□ -0.06
ACTN1-209ENST00000553659 VCX3AQ9NNX9 186 aa14.69□□□□□ -0.06
ACTN1-209ENST00000553659 KRT84Q9NSB2 600 aa14.69□□□□□ -0.06
ACTN1-209ENST00000553659 COQ3Q9NZJ6 369 aa14.69□□□□□ -0.06
ACTN1-209ENST00000553659 KCMF1Q9P0J7 381 aa14.69□□□□□ -0.06
ACTN1-209ENST00000553659 TMEFF2Q9UIK5 374 aaPredicted RBP14.69□□□□□ -0.06
ACTN1-209ENST00000553659 GPC6Q9Y625 555 aaPredicted RBP14.69□□□□□ -0.06
ACTN1-209ENST00000553659 U3KQV3 271 aa14.69□□□□□ -0.06
ACTN1-209ENST00000553659 CCDC168Q8NDH2 2452 aa14.69□□□□□ -0.06
ACTN1-209ENST00000553659 EML6Q6ZMW3 1958 aa14.69□□□□□ -0.06
ACTN1-209ENST00000553659 INTS1Q8N201 2190 aaKnown RBP14.68□□□□□ -0.06
ACTN1-209ENST00000553659 SAGE2PA6NJ88 616 aa14.68□□□□□ -0.06
ACTN1-209ENST00000553659 BCKDKO14874 412 aa14.68□□□□□ -0.06
ACTN1-209ENST00000553659 MFN2O95140 757 aa14.68□□□□□ -0.06
ACTN1-209ENST00000553659 OPN1SWP03999 348 aa14.68□□□□□ -0.06
ACTN1-209ENST00000553659 TFAP2AP05549 437 aa14.68□□□□□ -0.06
ACTN1-209ENST00000553659 GNAO1P09471 354 aa14.68□□□□□ -0.06
ACTN1-209ENST00000553659 OR12D1P0DN82 309 aa14.68□□□□□ -0.06
ACTN1-209ENST00000553659 TTKP33981 857 aa14.68□□□□□ -0.06
ACTN1-209ENST00000553659 HMGA2P52926 109 aa14.68□□□□□ -0.06
ACTN1-209ENST00000553659 RAB38P57729 211 aa14.68□□□□□ -0.06
ACTN1-209ENST00000553659 GABARAPL2P60520 117 aa14.68□□□□□ -0.06
ACTN1-209ENST00000553659 ESRRGP62508 458 aa14.68□□□□□ -0.06
ACTN1-209ENST00000553659 BTG2P78543 158 aa14.68□□□□□ -0.06
ACTN1-209ENST00000553659 SPIBQ01892 262 aa14.68□□□□□ -0.06
ACTN1-209ENST00000553659 ZIK1Q3SY52 487 aaPredicted RBP14.68□□□□□ -0.06
ACTN1-209ENST00000553659 ZNF691Q5VV52 312 aa14.68□□□□□ -0.06
ACTN1-209ENST00000553659 ZCCHC12Q6PEW1 402 aa14.68□□□□□ -0.06
ACTN1-209ENST00000553659 SPNS3Q6ZMD2 512 aa14.68□□□□□ -0.06
ACTN1-209ENST00000553659 MEX3BQ6ZN04 569 aaKnown RBP14.68□□□□□ -0.06
ACTN1-209ENST00000553659 ARMC10Q8N2F6 343 aa14.68□□□□□ -0.06
ACTN1-209ENST00000553659 C7orf57Q8NEG2 295 aa14.68□□□□□ -0.06
ACTN1-209ENST00000553659 NFAM1Q8NET5 270 aaPredicted RBP14.68□□□□□ -0.06
ACTN1-209ENST00000553659 NUP43Q8NFH3 380 aa14.68□□□□□ -0.06
ACTN1-209ENST00000553659 OR10Q1Q8NGQ4 319 aa14.68□□□□□ -0.06
ACTN1-209ENST00000553659 MS4A4EQ96PG1 132 aa14.68□□□□□ -0.06
ACTN1-209ENST00000553659 ACTRT3Q9BYD9 372 aa14.68□□□□□ -0.06
ACTN1-209ENST00000553659 VNN3Q9NY84 501 aa14.68□□□□□ -0.06
ACTN1-209ENST00000553659 KLF13Q9Y2Y9 288 aaPredicted RBP14.68□□□□□ -0.06
ACTN1-209ENST00000553659 LYVE1Q9Y5Y7 322 aa14.68□□□□□ -0.06
ACTN1-209ENST00000553659 A0A087WV62 115 aa14.67□□□□□ -0.06
ACTN1-209ENST00000553659 A0A1B0GTH9 108 aa14.67□□□□□ -0.06
ACTN1-209ENST00000553659 TCRBV16S1A1N1A0A5B0 115 aa14.67□□□□□ -0.06
ACTN1-209ENST00000553659 GLOD5A6NK44 160 aa14.67□□□□□ -0.06
ACTN1-209ENST00000553659 KLRC4-KLRK1H3BQV0 150 aa14.67□□□□□ -0.06
ACTN1-209ENST00000553659 PORP16435 677 aaPredicted RBP14.67□□□□□ -0.06
ACTN1-209ENST00000553659 CD247P20963 164 aa14.67□□□□□ -0.06
ACTN1-209ENST00000553659 PTGER1P34995 402 aa14.67□□□□□ -0.06
ACTN1-209ENST00000553659 PTGS2P35354 604 aa14.67□□□□□ -0.06
ACTN1-209ENST00000553659 FEN1P39748 380 aaKnown RBP14.67□□□□□ -0.06
ACTN1-209ENST00000553659 KCNJ5P48544 419 aa14.67□□□□□ -0.06
ACTN1-209ENST00000553659 MEOX1P50221 254 aa14.67□□□□□ -0.06
ACTN1-209ENST00000553659 DAPP51397 102 aa14.67□□□□□ -0.06
ACTN1-209ENST00000553659 XKP51811 444 aa14.67□□□□□ -0.06
ACTN1-209ENST00000553659 CASP9P55211 416 aa14.67□□□□□ -0.06
ACTN1-209ENST00000553659 NUP107P57740 925 aa14.67□□□□□ -0.06
ACTN1-209ENST00000553659 RPS26P62854 115 aaKnown RBP14.67□□□□□ -0.06
ACTN1-209ENST00000553659 RUNX2Q13950 521 aa14.67□□□□□ -0.06
ACTN1-209ENST00000553659 FAM180BQ6P0A1 224 aa14.67□□□□□ -0.06
ACTN1-209ENST00000553659 TMEM107Q6UX40 140 aa14.67□□□□□ -0.06
ACTN1-209ENST00000553659 CDH24Q86UP0 819 aa14.67□□□□□ -0.06
ACTN1-209ENST00000553659 SULF2Q8IWU5 870 aa14.67□□□□□ -0.06
ACTN1-209ENST00000553659 LINC00471Q8N535 108 aa14.67□□□□□ -0.06
ACTN1-209ENST00000553659 C16orf52Q8NHV5 167 aa14.67□□□□□ -0.06
ACTN1-209ENST00000553659 FAM57AQ8TBR7 257 aa14.67□□□□□ -0.06
ACTN1-209ENST00000553659 XAGE5Q8WWM1 108 aa14.67□□□□□ -0.06
ACTN1-209ENST00000553659 MUS81Q96NY9 551 aa14.67□□□□□ -0.06
ACTN1-209ENST00000553659 TRNT1Q96Q11 434 aaKnown RBP14.67□□□□□ -0.06
ACTN1-209ENST00000553659 GABARAPL3Q9BY60 117 aa14.67□□□□□ -0.06
ACTN1-209ENST00000553659 DEFB126Q9BYW3 111 aa14.67□□□□□ -0.06
ACTN1-209ENST00000553659 ZNF556Q9HAH1 456 aa14.67□□□□□ -0.06
ACTN1-209ENST00000553659 MRPS33Q9Y291 106 aaKnown RBP14.67□□□□□ -0.06
ACTN1-209ENST00000553659 SLC9A8Q9Y2E8 581 aa14.67□□□□□ -0.06
ACTN1-209ENST00000553659 POFUT2Q9Y2G5 429 aa14.67□□□□□ -0.06
ACTN1-209ENST00000553659 PCDHGB5Q9Y5G0 923 aa14.67□□□□□ -0.06
ACTN1-209ENST00000553659 MAGED1Q9Y5V3 778 aaPredicted RBP14.67□□□□□ -0.06
ACTN1-209ENST00000553659 DNAJC13O75165 2243 aa14.67□□□□□ -0.06
ACTN1-209ENST00000553659 HIVEP1P15822 2718 aa14.67□□□□□ -0.06
ACTN1-209ENST00000553659 ZNF407Q9C0G0 2248 aa14.66□□□□□ -0.06
ACTN1-209ENST00000553659 IGKV3D-11A0A0A0MRZ8 115 aa14.66□□□□□ -0.06
ACTN1-209ENST00000553659 SYT5O00445 386 aa14.66□□□□□ -0.06
ACTN1-209ENST00000553659 TFECO14948 347 aaPredicted RBP14.66□□□□□ -0.06
ACTN1-209ENST00000553659 PRKRAO75569 313 aaKnown RBP14.66□□□□□ -0.06
ACTN1-209ENST00000553659 OXSR1O95747 527 aaPredicted RBP14.66□□□□□ -0.06
ACTN1-209ENST00000553659 ATP1B1P05026 303 aa14.66□□□□□ -0.06
ACTN1-209ENST00000553659 HMGN2P05204 90 aaKnown RBP14.66□□□□□ -0.06
ACTN1-209ENST00000553659 FESP07332 822 aa14.66□□□□□ -0.06
ACTN1-209ENST00000553659 RNH1P13489 461 aaKnown RBP14.66□□□□□ -0.06
ACTN1-209ENST00000553659 CPMP14384 443 aa14.66□□□□□ -0.06
ACTN1-209ENST00000553659 ATP6V1B1P15313 513 aa14.66□□□□□ -0.06
ACTN1-209ENST00000553659 MAOAP21397 527 aa14.66□□□□□ -0.06
ACTN1-209ENST00000553659 PRKAG1P54619 331 aa14.66□□□□□ -0.06
ACTN1-209ENST00000553659 HPCAP84074 193 aa14.66□□□□□ -0.06
ACTN1-209ENST00000553659 LASP1Q14847 261 aaKnown RBP14.66□□□□□ -0.06
ACTN1-209ENST00000553659 MICAQ29983 383 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms