RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 IL33O95760 270 aa6.44□□□□□ -1.38
ATXN3-219ENST00000553488 PDYNP01213 254 aa6.44□□□□□ -1.38
ATXN3-219ENST00000553488 C2P06681 752 aa6.44□□□□□ -1.38
ATXN3-219ENST00000553488 IL3P08700 152 aa6.44□□□□□ -1.38
ATXN3-219ENST00000553488 RPS17P08708 135 aaKnown RBP6.44□□□□□ -1.38
ATXN3-219ENST00000553488 IGHV4-31P0DP07 118 aa6.44□□□□□ -1.38
ATXN3-219ENST00000553488 CCNG1P51959 295 aa6.44□□□□□ -1.38
ATXN3-219ENST00000553488 CDH11P55287 796 aa6.44□□□□□ -1.38
ATXN3-219ENST00000553488 RAE1P78406 368 aaKnown RBP6.44□□□□□ -1.38
ATXN3-219ENST00000553488 IRX1P78414 480 aaPredicted RBP6.44□□□□□ -1.38
ATXN3-219ENST00000553488 PRR5P85299 388 aa6.44□□□□□ -1.38
ATXN3-219ENST00000553488 ZNF155Q12901 538 aaPredicted RBP6.44□□□□□ -1.38
ATXN3-219ENST00000553488 IFT88Q13099 833 aa6.44□□□□□ -1.38
ATXN3-219ENST00000553488 ACAP2Q15057 778 aa6.44□□□□□ -1.38
ATXN3-219ENST00000553488 SGCBQ16585 318 aa6.44□□□□□ -1.38
ATXN3-219ENST00000553488 ZNF239Q16600 458 aaKnown RBP6.44□□□□□ -1.38
ATXN3-219ENST00000553488 NRF1Q16656 503 aa6.44□□□□□ -1.38
ATXN3-219ENST00000553488 FAM83EQ2M2I3 478 aa6.44□□□□□ -1.38
ATXN3-219ENST00000553488 ERCC6LQ2NKX8 1250 aa6.44□□□□□ -1.38
ATXN3-219ENST00000553488 LGSNQ5TDP6 509 aa6.44□□□□□ -1.38
ATXN3-219ENST00000553488 PPP4R4Q6NUP7 873 aa6.44□□□□□ -1.38
ATXN3-219ENST00000553488 MARCH3Q86UD3 253 aa6.44□□□□□ -1.38
ATXN3-219ENST00000553488 STK32CQ86UX6 486 aa6.44□□□□□ -1.38
ATXN3-219ENST00000553488 CCDC103Q8IW40 242 aa6.44□□□□□ -1.38
ATXN3-219ENST00000553488 CTAGE3PQ8IX95 158 aa6.44□□□□□ -1.38
ATXN3-219ENST00000553488 Q8N1Y9 231 aa6.44□□□□□ -1.38
ATXN3-219ENST00000553488 GTPBP8Q8N3Z3 284 aaPredicted RBP6.44□□□□□ -1.38
ATXN3-219ENST00000553488 C1orf52Q8N6N3 182 aaKnown RBP6.44□□□□□ -1.38
ATXN3-219ENST00000553488 PPM1NQ8N819 430 aa6.44□□□□□ -1.38
ATXN3-219ENST00000553488 PTGR2Q8N8N7 351 aaPredicted RBP6.44□□□□□ -1.38
ATXN3-219ENST00000553488 OR4F6Q8NGB9 312 aa6.44□□□□□ -1.38
ATXN3-219ENST00000553488 DUSP19Q8WTR2 217 aa6.44□□□□□ -1.38
ATXN3-219ENST00000553488 ABHD3Q8WU67 409 aa6.44□□□□□ -1.38
ATXN3-219ENST00000553488 MTBPQ96DY7 904 aa6.44□□□□□ -1.38
ATXN3-219ENST00000553488 KLHDC3Q9BQ90 382 aa6.44□□□□□ -1.38
ATXN3-219ENST00000553488 RHNO1Q9BSD3 238 aa6.44□□□□□ -1.38
ATXN3-219ENST00000553488 FAIM2Q9BWQ8 316 aa6.44□□□□□ -1.38
ATXN3-219ENST00000553488 BEX2Q9BXY8 128 aa6.44□□□□□ -1.38
ATXN3-219ENST00000553488 BRF2Q9HAW0 419 aa6.44□□□□□ -1.38
ATXN3-219ENST00000553488 PAQR5Q9NXK6 330 aaPredicted RBP6.44□□□□□ -1.38
ATXN3-219ENST00000553488 NPAP1Q9NZP6 1156 aa6.44□□□□□ -1.38
ATXN3-219ENST00000553488 CPSF2Q9P2I0 782 aaKnown RBP6.44□□□□□ -1.38
ATXN3-219ENST00000553488 XPR1Q9UBH6 696 aa6.44□□□□□ -1.38
ATXN3-219ENST00000553488 TMEFF2Q9UIK5 374 aaPredicted RBP6.44□□□□□ -1.38
ATXN3-219ENST00000553488 MCM8Q9UJA3 840 aa6.44□□□□□ -1.38
ATXN3-219ENST00000553488 ZNF225Q9UK10 706 aa6.44□□□□□ -1.38
ATXN3-219ENST00000553488 PSME2Q9UL46 239 aa6.44□□□□□ -1.38
ATXN3-219ENST00000553488 MCTS1Q9ULC4 181 aaKnown RBP6.44□□□□□ -1.38
ATXN3-219ENST00000553488 VDAC3Q9Y277 283 aa6.44□□□□□ -1.38
ATXN3-219ENST00000553488 SNX24Q9Y343 169 aa6.44□□□□□ -1.38
ATXN3-219ENST00000553488 OR10H1Q9Y4A9 318 aa6.44□□□□□ -1.38
ATXN3-219ENST00000553488 TNPO3Q9Y5L0 923 aaKnown RBP6.44□□□□□ -1.38
ATXN3-219ENST00000553488 A0A087WV62 115 aa6.43□□□□□ -1.38
ATXN3-219ENST00000553488 UQCRHLA0A096LP55 91 aa6.43□□□□□ -1.38
ATXN3-219ENST00000553488 A0A0J9YW62 118 aa6.43□□□□□ -1.38
ATXN3-219ENST00000553488 STX16-NPEPL1H3BU86 382 aa6.43□□□□□ -1.38
ATXN3-219ENST00000553488 PPP6CO00743 305 aa6.43□□□□□ -1.38
ATXN3-219ENST00000553488 STX16O14662 325 aa6.43□□□□□ -1.38
ATXN3-219ENST00000553488 TNFSF11O14788 317 aa6.43□□□□□ -1.38
ATXN3-219ENST00000553488 NPHS1O60500 1241 aa6.43□□□□□ -1.38
ATXN3-219ENST00000553488 NTN1O95631 604 aa6.43□□□□□ -1.38
ATXN3-219ENST00000553488 ANGPTL1O95841 491 aa6.43□□□□□ -1.38
ATXN3-219ENST00000553488 IGKV1D-16P01601 117 aa6.43□□□□□ -1.38
ATXN3-219ENST00000553488 GSTA2P09210 222 aa6.43□□□□□ -1.38
ATXN3-219ENST00000553488 SLC25A16P16260 332 aa6.43□□□□□ -1.38
ATXN3-219ENST00000553488 PTNP21246 168 aa6.43□□□□□ -1.38
ATXN3-219ENST00000553488 SHC1P29353 583 aa6.43□□□□□ -1.38
ATXN3-219ENST00000553488 ARL1P40616 181 aaPredicted RBP6.43□□□□□ -1.38
ATXN3-219ENST00000553488 NUDT6P53370 316 aa6.43□□□□□ -1.38
ATXN3-219ENST00000553488 C21orf58P58505 322 aa6.43□□□□□ -1.38
ATXN3-219ENST00000553488 P2RY6Q15077 328 aa6.43□□□□□ -1.38
ATXN3-219ENST00000553488 PRSS53Q2L4Q9 553 aa6.43□□□□□ -1.38
ATXN3-219ENST00000553488 PLPPR5Q32ZL2 321 aa6.43□□□□□ -1.38
ATXN3-219ENST00000553488 SGO1Q5FBB7 561 aa6.43□□□□□ -1.38
ATXN3-219ENST00000553488 TCHHL1Q5QJ38 904 aaPredicted RBP6.43□□□□□ -1.38
ATXN3-219ENST00000553488 TTC19Q6DKK2 380 aaPredicted RBP6.43□□□□□ -1.38
ATXN3-219ENST00000553488 C3orf62Q6ZUJ4 267 aa6.43□□□□□ -1.38
ATXN3-219ENST00000553488 ESPNLQ6ZVH7 1005 aa6.43□□□□□ -1.38
ATXN3-219ENST00000553488 IL17RELQ6ZVW7 336 aa6.43□□□□□ -1.38
ATXN3-219ENST00000553488 RPS27LQ71UM5 84 aaKnown RBP6.43□□□□□ -1.38
ATXN3-219ENST00000553488 NUFIP2Q7Z417 695 aaKnown RBP6.43□□□□□ -1.38
ATXN3-219ENST00000553488 CCDC91Q7Z6B0 441 aa6.43□□□□□ -1.38
ATXN3-219ENST00000553488 EXOC3L1Q86VI1 746 aa6.43□□□□□ -1.38
ATXN3-219ENST00000553488 TDRPQ86YL5 185 aa6.43□□□□□ -1.38
ATXN3-219ENST00000553488 WDR75Q8IWA0 830 aaKnown RBP6.43□□□□□ -1.38
ATXN3-219ENST00000553488 FAM9CQ8IZT9 166 aa6.43□□□□□ -1.38
ATXN3-219ENST00000553488 ZNF525Q8N782 197 aa6.43□□□□□ -1.38
ATXN3-219ENST00000553488 BANPQ8N9N5 519 aa6.43□□□□□ -1.38
ATXN3-219ENST00000553488 OR2V1Q8NHB1 315 aa6.43□□□□□ -1.38
ATXN3-219ENST00000553488 POC1BQ8TC44 478 aa6.43□□□□□ -1.38
ATXN3-219ENST00000553488 HSD17B8Q92506 261 aa6.43□□□□□ -1.38
ATXN3-219ENST00000553488 EXOSC8Q96B26 276 aaKnown RBP6.43□□□□□ -1.38
ATXN3-219ENST00000553488 CCDC140Q96MF4 163 aa6.43□□□□□ -1.38
ATXN3-219ENST00000553488 LMF2Q9BU23 707 aaKnown RBP6.43□□□□□ -1.38
ATXN3-219ENST00000553488 CACNG6Q9BXT2 260 aa6.43□□□□□ -1.38
ATXN3-219ENST00000553488 HDHD5Q9BXW7 423 aa6.43□□□□□ -1.38
ATXN3-219ENST00000553488 SRXN1Q9BYN0 137 aa6.43□□□□□ -1.38
ATXN3-219ENST00000553488 PRRG4Q9BZD6 226 aa6.43□□□□□ -1.38
ATXN3-219ENST00000553488 SHARPINQ9H0F6 387 aa6.43□□□□□ -1.38
ATXN3-219ENST00000553488 ELOVL6Q9H5J4 265 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms