RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 IL18BPO95998 194 aa12.13□□□□□ -0.47
NUP188-211ENST00000550219 CT45A8P0DMV1 189 aa12.13□□□□□ -0.47
NUP188-211ENST00000550219 CT45A9P0DMV2 189 aa12.13□□□□□ -0.47
NUP188-211ENST00000550219 EPXP11678 715 aa12.13□□□□□ -0.47
NUP188-211ENST00000550219 BMP2P12643 396 aa12.13□□□□□ -0.47
NUP188-211ENST00000550219 CPN1P15169 458 aa12.13□□□□□ -0.47
NUP188-211ENST00000550219 KLK2P20151 261 aa12.13□□□□□ -0.47
NUP188-211ENST00000550219 SRD5A2P31213 254 aa12.13□□□□□ -0.47
NUP188-211ENST00000550219 CHI3L1P36222 383 aaPredicted RBP12.13□□□□□ -0.47
NUP188-211ENST00000550219 PRIM2P49643 509 aa12.13□□□□□ -0.47
NUP188-211ENST00000550219 PRKAG1P54619 331 aa12.13□□□□□ -0.47
NUP188-211ENST00000550219 PSME3P61289 254 aa12.13□□□□□ -0.47
NUP188-211ENST00000550219 SLC25A3Q00325 362 aa12.13□□□□□ -0.47
NUP188-211ENST00000550219 SORDQ00796 357 aa12.13□□□□□ -0.47
NUP188-211ENST00000550219 TP53BP2Q13625 1128 aa12.13□□□□□ -0.47
NUP188-211ENST00000550219 EFR3AQ14156 821 aa12.13□□□□□ -0.47
NUP188-211ENST00000550219 LASP1Q14847 261 aaKnown RBP12.13□□□□□ -0.47
NUP188-211ENST00000550219 CT45A2Q5DJT8 189 aa12.13□□□□□ -0.47
NUP188-211ENST00000550219 CDC73Q6P1J9 531 aa12.13□□□□□ -0.47
NUP188-211ENST00000550219 AAGABQ6PD74 315 aa12.13□□□□□ -0.47
NUP188-211ENST00000550219 RINLQ6ZS11 566 aa12.13□□□□□ -0.47
NUP188-211ENST00000550219 P4HA3Q7Z4N8 544 aa12.13□□□□□ -0.47
NUP188-211ENST00000550219 ARPINQ7Z6K5 226 aa12.13□□□□□ -0.47
NUP188-211ENST00000550219 UBQLNLQ8IYU4 475 aa12.13□□□□□ -0.47
NUP188-211ENST00000550219 PGAM4Q8N0Y7 254 aa12.13□□□□□ -0.47
NUP188-211ENST00000550219 CDRT4Q8N9R6 151 aa12.13□□□□□ -0.47
NUP188-211ENST00000550219 OR4N2Q8NGD1 307 aa12.13□□□□□ -0.47
NUP188-211ENST00000550219 DTNBP1Q96EV8 351 aa12.13□□□□□ -0.47
NUP188-211ENST00000550219 C16orf58Q96GQ5 468 aa12.13□□□□□ -0.47
NUP188-211ENST00000550219 TM9SF2Q99805 663 aa12.13□□□□□ -0.47
NUP188-211ENST00000550219 SH3GL1Q99961 368 aa12.13□□□□□ -0.47
NUP188-211ENST00000550219 SFXN3Q9BWM7 321 aa12.13□□□□□ -0.47
NUP188-211ENST00000550219 ACTRT3Q9BYD9 372 aa12.13□□□□□ -0.47
NUP188-211ENST00000550219 CXXC4Q9H2H0 198 aa12.13□□□□□ -0.47
NUP188-211ENST00000550219 RAD21L1Q9H4I0 556 aa12.13□□□□□ -0.47
NUP188-211ENST00000550219 GIN1Q9NXP7 522 aa12.13□□□□□ -0.47
NUP188-211ENST00000550219 NDE1Q9NXR1 346 aa12.13□□□□□ -0.47
NUP188-211ENST00000550219 PPP4R1LQ9P1A2 415 aa12.13□□□□□ -0.47
NUP188-211ENST00000550219 CLCF1Q9UBD9 225 aa12.13□□□□□ -0.47
NUP188-211ENST00000550219 ABCD2Q9UBJ2 740 aa12.13□□□□□ -0.47
NUP188-211ENST00000550219 EDARQ9UNE0 448 aa12.13□□□□□ -0.47
NUP188-211ENST00000550219 AP3M1Q9Y2T2 418 aa12.13□□□□□ -0.47
NUP188-211ENST00000550219 MED13LQ71F56 2210 aa12.13□□□□□ -0.47
NUP188-211ENST00000550219 C2CD3Q4AC94 2353 aa12.12□□□□□ -0.47
NUP188-211ENST00000550219 FAM221AA4D161 298 aa12.12□□□□□ -0.47
NUP188-211ENST00000550219 EVPLLA8MZ36 301 aa12.12□□□□□ -0.47
NUP188-211ENST00000550219 SOX30O94993 753 aa12.12□□□□□ -0.47
NUP188-211ENST00000550219 NKX2-2O95096 273 aa12.12□□□□□ -0.47
NUP188-211ENST00000550219 RAF1P04049 648 aa12.12□□□□□ -0.47
NUP188-211ENST00000550219 ACP2P11117 423 aa12.12□□□□□ -0.47
NUP188-211ENST00000550219 MATN1P21941 496 aa12.12□□□□□ -0.47
NUP188-211ENST00000550219 DPP4P27487 766 aa12.12□□□□□ -0.47
NUP188-211ENST00000550219 RFX3P48380 749 aa12.12□□□□□ -0.47
NUP188-211ENST00000550219 LHX2P50458 406 aa12.12□□□□□ -0.47
NUP188-211ENST00000550219 GZMMP51124 257 aa12.12□□□□□ -0.47
NUP188-211ENST00000550219 GFRA1P56159 465 aa12.12□□□□□ -0.47
NUP188-211ENST00000550219 PSG6Q00889 435 aa12.12□□□□□ -0.47
NUP188-211ENST00000550219 FOXD4Q12950 439 aaPredicted RBP12.12□□□□□ -0.47
NUP188-211ENST00000550219 FADDQ13158 208 aa12.12□□□□□ -0.47
NUP188-211ENST00000550219 KEAP1Q14145 624 aa12.12□□□□□ -0.47
NUP188-211ENST00000550219 SELPLGQ14242 412 aa12.12□□□□□ -0.47
NUP188-211ENST00000550219 RGNQ15493 299 aa12.12□□□□□ -0.47
NUP188-211ENST00000550219 RABL3Q5HYI8 236 aa12.12□□□□□ -0.47
NUP188-211ENST00000550219 COX20Q5RI15 118 aa12.12□□□□□ -0.47
NUP188-211ENST00000550219 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.12□□□□□ -0.47
NUP188-211ENST00000550219 RAET1LQ5VY80 246 aa12.12□□□□□ -0.47
NUP188-211ENST00000550219 C16orf89Q6UX73 402 aa12.12□□□□□ -0.47
NUP188-211ENST00000550219 CCDC121Q6ZUS5 278 aa12.12□□□□□ -0.47
NUP188-211ENST00000550219 YTHDF3Q7Z739 585 aaKnown RBP12.12□□□□□ -0.47
NUP188-211ENST00000550219 RNF130Q86XS8 419 aa12.12□□□□□ -0.47
NUP188-211ENST00000550219 SLC15A3Q8IY34 581 aa12.12□□□□□ -0.47
NUP188-211ENST00000550219 SLC35G5Q96KT7 338 aa12.12□□□□□ -0.47
NUP188-211ENST00000550219 ZFP3Q96NJ6 502 aa12.12□□□□□ -0.47
NUP188-211ENST00000550219 STACQ99469 402 aa12.12□□□□□ -0.47
NUP188-211ENST00000550219 G6PC3Q9BUM1 346 aa12.12□□□□□ -0.47
NUP188-211ENST00000550219 TMUB1Q9BVT8 246 aa12.12□□□□□ -0.47
NUP188-211ENST00000550219 KAT8Q9H7Z6 458 aaKnown RBP12.12□□□□□ -0.47
NUP188-211ENST00000550219 DUSP22Q9NRW4 184 aa12.12□□□□□ -0.47
NUP188-211ENST00000550219 CMTM6Q9NX76 183 aa12.12□□□□□ -0.47
NUP188-211ENST00000550219 JKAMPQ9P055 326 aa12.12□□□□□ -0.47
NUP188-211ENST00000550219 TMEM181Q9P2C4 612 aa12.12□□□□□ -0.47
NUP188-211ENST00000550219 FAF1Q9UNN5 650 aaPredicted RBP12.12□□□□□ -0.47
NUP188-211ENST00000550219 CORO2BQ9UQ03 480 aa12.12□□□□□ -0.47
NUP188-211ENST00000550219 DUXAA6NLW8 204 aa12.11□□□□□ -0.47
NUP188-211ENST00000550219 SEC14L5O43304 696 aa12.11□□□□□ -0.47
NUP188-211ENST00000550219 GMFGO60234 142 aa12.11□□□□□ -0.47
NUP188-211ENST00000550219 TNFRSF21O75509 655 aa12.11□□□□□ -0.47
NUP188-211ENST00000550219 SMNDC1O75940 238 aaKnown RBP eCLIP12.11□□□□□ -0.47
NUP188-211ENST00000550219 ZNF708P17019 499 aa12.11□□□□□ -0.47
NUP188-211ENST00000550219 EVI2BP34910 448 aa12.11□□□□□ -0.47
NUP188-211ENST00000550219 CLDN18P56856 261 aa12.11□□□□□ -0.47
NUP188-211ENST00000550219 MTPNP58546 118 aa12.11□□□□□ -0.47
NUP188-211ENST00000550219 MRPS22P82650 360 aaKnown RBP12.11□□□□□ -0.47
NUP188-211ENST00000550219 DAZAP2Q15038 168 aaPredicted RBP12.11□□□□□ -0.47
NUP188-211ENST00000550219 CHMP1BQ7LBR1 199 aa12.11□□□□□ -0.47
NUP188-211ENST00000550219 SZRD1Q7Z422 152 aa12.11□□□□□ -0.47
NUP188-211ENST00000550219 NET1Q7Z628 596 aaPredicted RBP12.11□□□□□ -0.47
NUP188-211ENST00000550219 CALHM3Q86XJ0 350 aa12.11□□□□□ -0.47
NUP188-211ENST00000550219 C10orf111Q8N326 155 aa12.11□□□□□ -0.47
NUP188-211ENST00000550219 SLC16A11Q8NCK7 471 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms