RNA–Protein interactions for RNA: ENST00000550016.5

DDX54-207, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-207ENST00000550016 ARSGQ96EG1 525 aa17.52■□□□□ 0.4
DDX54-207ENST00000550016 CCDC120Q96HB5 630 aa17.52■□□□□ 0.4
DDX54-207ENST00000550016 CCT8L2Q96SF2 557 aa17.52■□□□□ 0.4
DDX54-207ENST00000550016 SH3GL1Q99961 368 aa17.52■□□□□ 0.4
DDX54-207ENST00000550016 TMEM38AQ9H6F2 299 aa17.52■□□□□ 0.4
DDX54-207ENST00000550016 BCL2L10Q9HD36 194 aa17.52■□□□□ 0.4
DDX54-207ENST00000550016 ADAM21Q9UKJ8 722 aa17.52■□□□□ 0.4
DDX54-207ENST00000550016 DOCK7Q96N67 2140 aa17.51■□□□□ 0.39
DDX54-207ENST00000550016 SPTBN1Q01082 2364 aaKnown RBP17.51■□□□□ 0.39
DDX54-207ENST00000550016 C7orf72A4D263 438 aa17.51■□□□□ 0.39
DDX54-207ENST00000550016 CYP7B1O75881 506 aa17.51■□□□□ 0.39
DDX54-207ENST00000550016 PGM3O95394 542 aa17.51■□□□□ 0.39
DDX54-207ENST00000550016 LINGO3P0C6S8 592 aa17.51■□□□□ 0.39
DDX54-207ENST00000550016 UBTFL6P0CB48 400 aaPredicted RBP17.51■□□□□ 0.39
DDX54-207ENST00000550016 PTGER4P35408 488 aa17.51■□□□□ 0.39
DDX54-207ENST00000550016 STARP49675 285 aa17.51■□□□□ 0.39
DDX54-207ENST00000550016 LHX2P50458 406 aa17.51■□□□□ 0.39
DDX54-207ENST00000550016 MTPNP58546 118 aa17.51■□□□□ 0.39
DDX54-207ENST00000550016 CDK6Q00534 326 aa17.51■□□□□ 0.39
DDX54-207ENST00000550016 CBFBQ13951 182 aa17.51■□□□□ 0.39
DDX54-207ENST00000550016 SELPLGQ14242 412 aa17.51■□□□□ 0.39
DDX54-207ENST00000550016 SF3B4Q15427 424 aaKnown RBP eCLIP17.51■□□□□ 0.395e-6■■□□□ 11.6
DDX54-207ENST00000550016 ADRM1Q16186 407 aa17.51■□□□□ 0.39
DDX54-207ENST00000550016 BCL2A1Q16548 175 aa17.51■□□□□ 0.39
DDX54-207ENST00000550016 RPS26P11Q5JNZ5 115 aaPredicted RBP17.51■□□□□ 0.39
DDX54-207ENST00000550016 C1orf185Q5T7R7 199 aa17.51■□□□□ 0.39
DDX54-207ENST00000550016 NANOGP8Q6NSW7 305 aa17.51■□□□□ 0.39
DDX54-207ENST00000550016 REEP3Q6NUK4 255 aa17.51■□□□□ 0.39
DDX54-207ENST00000550016 TREML1Q86YW5 311 aa17.51■□□□□ 0.39
DDX54-207ENST00000550016 GTPBP8Q8N3Z3 284 aaPredicted RBP17.51■□□□□ 0.39
DDX54-207ENST00000550016 FAM71CQ8NEG0 241 aa17.51■□□□□ 0.39
DDX54-207ENST00000550016 OR5M1Q8NGP8 315 aa17.51■□□□□ 0.39
DDX54-207ENST00000550016 OR52P1PQ8NH57 321 aa17.51■□□□□ 0.39
DDX54-207ENST00000550016 NFKBIDQ8NI38 313 aa17.51■□□□□ 0.39
DDX54-207ENST00000550016 BBS10Q8TAM1 723 aa17.51■□□□□ 0.39
DDX54-207ENST00000550016 TRIM8Q9BZR9 551 aa17.51■□□□□ 0.39
DDX54-207ENST00000550016 KAT8Q9H7Z6 458 aaKnown RBP17.51■□□□□ 0.39
DDX54-207ENST00000550016 NANOGQ9H9S0 305 aa17.51■□□□□ 0.39
DDX54-207ENST00000550016 CACYBPQ9HB71 228 aaKnown RBP17.51■□□□□ 0.39
DDX54-207ENST00000550016 ZNF232Q9UNY5 417 aa17.51■□□□□ 0.39
DDX54-207ENST00000550016 ZNF337Q9Y3M9 751 aa17.51■□□□□ 0.39
DDX54-207ENST00000550016 MED12LQ86YW9 2145 aa17.5■□□□□ 0.39
DDX54-207ENST00000550016 KIAA1549Q9HCM3 1950 aa17.5■□□□□ 0.39
DDX54-207ENST00000550016 CLDN24A6NM45 220 aa17.5■□□□□ 0.39
DDX54-207ENST00000550016 FXYD1O00168 92 aa17.5■□□□□ 0.39
DDX54-207ENST00000550016 ZG16O60844 167 aa17.5■□□□□ 0.39
DDX54-207ENST00000550016 DNAJA2O60884 412 aa17.5■□□□□ 0.39
DDX54-207ENST00000550016 SHOX2O60902 331 aaPredicted RBP17.5■□□□□ 0.39
DDX54-207ENST00000550016 PEPDP12955 493 aa17.5■□□□□ 0.39
DDX54-207ENST00000550016 NID1P14543 1247 aa17.5■□□□□ 0.39
DDX54-207ENST00000550016 ZNF17P17021 662 aa17.5■□□□□ 0.39
DDX54-207ENST00000550016 SLC6A2P23975 617 aa17.5■□□□□ 0.39
DDX54-207ENST00000550016 EIF1P41567 113 aaKnown RBP17.5■□□□□ 0.39
DDX54-207ENST00000550016 CCR4P51679 360 aa17.5■□□□□ 0.39
DDX54-207ENST00000550016 RTL6Q6ICC9 239 aa17.5■□□□□ 0.39
DDX54-207ENST00000550016 CNOT9Q92600 299 aaKnown RBP17.5■□□□□ 0.39
DDX54-207ENST00000550016 RCN3Q96D15 328 aa17.5■□□□□ 0.39
DDX54-207ENST00000550016 CMTM5Q96DZ9 223 aa17.5■□□□□ 0.39
DDX54-207ENST00000550016 SLC39A3Q9BRY0 314 aa17.5■□□□□ 0.39
DDX54-207ENST00000550016 EXOSC3Q9NQT5 275 aaKnown RBP17.5■□□□□ 0.39
DDX54-207ENST00000550016 STOML1Q9UBI4 398 aa17.5■□□□□ 0.39
DDX54-207ENST00000550016 IFT52Q9Y366 437 aa17.5■□□□□ 0.39
DDX54-207ENST00000550016 FAM215AQ9Y5M1 114 aa17.5■□□□□ 0.39
DDX54-207ENST00000550016 SHISA8B8ZZ34 492 aa17.49■□□□□ 0.39
DDX54-207ENST00000550016 BCAS1O75363 584 aaPredicted RBP17.49■□□□□ 0.39
DDX54-207ENST00000550016 FAM107AO95990 144 aa17.49■□□□□ 0.39
DDX54-207ENST00000550016 THBS1P07996 1170 aa17.49■□□□□ 0.39
DDX54-207ENST00000550016 ETS2P15036 469 aa17.49■□□□□ 0.39
DDX54-207ENST00000550016 ZNF708P17019 499 aa17.49■□□□□ 0.39
DDX54-207ENST00000550016 PGCP20142 388 aa17.49■□□□□ 0.39
DDX54-207ENST00000550016 POU3F2P20265 443 aaPredicted RBP17.49■□□□□ 0.39
DDX54-207ENST00000550016 SMSP52788 366 aa17.49■□□□□ 0.39
DDX54-207ENST00000550016 CLDN18P56856 261 aa17.49■□□□□ 0.39
DDX54-207ENST00000550016 ADORA2A-AS1P86434 159 aa17.49■□□□□ 0.39
DDX54-207ENST00000550016 SRYQ05066 204 aa17.49■□□□□ 0.39
DDX54-207ENST00000550016 RBBP4Q09028 425 aa17.49■□□□□ 0.39
DDX54-207ENST00000550016 SCARB2Q14108 478 aa17.49■□□□□ 0.39
DDX54-207ENST00000550016 LARS2Q15031 903 aaKnown RBP17.49■□□□□ 0.39
DDX54-207ENST00000550016 CYP51A1Q16850 503 aa17.49■□□□□ 0.39
DDX54-207ENST00000550016 ZSWIM7Q19AV6 140 aa17.49■□□□□ 0.39
DDX54-207ENST00000550016 LIN52Q52LA3 116 aa17.49■□□□□ 0.39
DDX54-207ENST00000550016 MRPL2Q5T653 305 aaKnown RBP17.49■□□□□ 0.39
DDX54-207ENST00000550016 RPTNQ6XPR3 784 aa17.49■□□□□ 0.39
DDX54-207ENST00000550016 B3GNT6Q6ZMB0 384 aa17.49■□□□□ 0.39
DDX54-207ENST00000550016 SERPINA11Q86U17 422 aa17.49■□□□□ 0.39
DDX54-207ENST00000550016 VRK2Q86Y07 508 aa17.49■□□□□ 0.39
DDX54-207ENST00000550016 C11orf65Q8NCR3 313 aa17.49■□□□□ 0.39
DDX54-207ENST00000550016 OR8J3Q8NGG0 315 aa17.49■□□□□ 0.39
DDX54-207ENST00000550016 POC1BQ8TC44 478 aa17.49■□□□□ 0.39
DDX54-207ENST00000550016 ZPLD1Q8TCW7 415 aa17.49■□□□□ 0.39
DDX54-207ENST00000550016 RNF145Q96MT1 663 aa17.49■□□□□ 0.39
DDX54-207ENST00000550016 NPAS1Q99742 590 aa17.49■□□□□ 0.39
DDX54-207ENST00000550016 TTYH2Q9BSA4 534 aa17.49■□□□□ 0.39
DDX54-207ENST00000550016 EFCAB1Q9HAE3 211 aa17.49■□□□□ 0.39
DDX54-207ENST00000550016 GPC6Q9Y625 555 aaPredicted RBP17.49■□□□□ 0.39
DDX54-207ENST00000550016 AP4B1Q9Y6B7 739 aa17.49■□□□□ 0.39
DDX54-207ENST00000550016 AIM2O14862 343 aa17.48■□□□□ 0.39
DDX54-207ENST00000550016 DCTN3O75935 186 aa17.48■□□□□ 0.39
DDX54-207ENST00000550016 EPPINO95925 133 aa17.48■□□□□ 0.39
DDX54-207ENST00000550016 RNF224P0DH78 156 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms