RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 YIPF6Q96EC8 236 aa4.46□□□□□ -1.7
SCAF11-212ENST00000549162 ZNF75AQ96N20 296 aa4.46□□□□□ -1.7
SCAF11-212ENST00000549162 OR7D2Q96RA2 312 aa4.46□□□□□ -1.7
SCAF11-212ENST00000549162 CEP41Q9BYV8 373 aa4.46□□□□□ -1.7
SCAF11-212ENST00000549162 DPY30Q9C005 99 aa4.46□□□□□ -1.7
SCAF11-212ENST00000549162 WWTR1Q9GZV5 400 aa4.46□□□□□ -1.7
SCAF11-212ENST00000549162 RPF2Q9H7B2 306 aaKnown RBP4.46□□□□□ -1.7
SCAF11-212ENST00000549162 PARD6AQ9NPB6 346 aa4.46□□□□□ -1.7
SCAF11-212ENST00000549162 PRR13Q9NZ81 148 aa4.46□□□□□ -1.7
SCAF11-212ENST00000549162 KLHL9Q9P2J3 617 aa4.46□□□□□ -1.7
SCAF11-212ENST00000549162 C15orf41Q9Y2V0 281 aa4.46□□□□□ -1.7
SCAF11-212ENST00000549162 hCG_1807616A0A1W2PRN6 198 aa4.45□□□□□ -1.7
SCAF11-212ENST00000549162 OR6C74A6NCV1 312 aa4.45□□□□□ -1.7
SCAF11-212ENST00000549162 CCDC182A6NF36 153 aa4.45□□□□□ -1.7
SCAF11-212ENST00000549162 CD8B2A6NJW9 211 aa4.45□□□□□ -1.7
SCAF11-212ENST00000549162 SPAG7O75391 227 aa4.45□□□□□ -1.7
SCAF11-212ENST00000549162 GBAP04062 536 aa4.45□□□□□ -1.7
SCAF11-212ENST00000549162 THY1P04216 161 aa4.45□□□□□ -1.7
SCAF11-212ENST00000549162 ALDOBP05062 364 aa4.45□□□□□ -1.7
SCAF11-212ENST00000549162 POU2F1P14859 743 aa4.45□□□□□ -1.7
SCAF11-212ENST00000549162 CD72P21854 359 aa4.45□□□□□ -1.7
SCAF11-212ENST00000549162 TLX1P31314 330 aaPredicted RBP4.45□□□□□ -1.7
SCAF11-212ENST00000549162 S100A3P33764 101 aa4.45□□□□□ -1.7
SCAF11-212ENST00000549162 C21orf59P57076 290 aa4.45□□□□□ -1.7
SCAF11-212ENST00000549162 DSTNP60981 165 aa4.45□□□□□ -1.7
SCAF11-212ENST00000549162 RPS16P62249 146 aaKnown RBP4.45□□□□□ -1.7
SCAF11-212ENST00000549162 PUM1Q14671 1186 aaKnown RBP eCLIP4.45□□□□□ -1.77e-10■□□□□ 8.7
SCAF11-212ENST00000549162 GPR19Q15760 415 aa4.45□□□□□ -1.7
SCAF11-212ENST00000549162 TMEM31Q5JXX7 168 aa4.45□□□□□ -1.7
SCAF11-212ENST00000549162 CATSPEREQ5SY80 951 aa4.45□□□□□ -1.7
SCAF11-212ENST00000549162 NDUFAF5Q5TEU4 345 aa4.45□□□□□ -1.7
SCAF11-212ENST00000549162 GPR139Q6DWJ6 353 aa4.45□□□□□ -1.7
SCAF11-212ENST00000549162 COLCA1Q6ZS62 124 aa4.45□□□□□ -1.7
SCAF11-212ENST00000549162 KCTD20Q7Z5Y7 419 aa4.45□□□□□ -1.7
SCAF11-212ENST00000549162 ADCK2Q7Z695 626 aa4.45□□□□□ -1.7
SCAF11-212ENST00000549162 GALNT11Q8NCW6 608 aa4.45□□□□□ -1.7
SCAF11-212ENST00000549162 IFI44Q8TCB0 444 aa4.45□□□□□ -1.7
SCAF11-212ENST00000549162 WDR60Q8WVS4 1066 aa4.45□□□□□ -1.7
SCAF11-212ENST00000549162 SELENOMQ8WWX9 145 aa4.45□□□□□ -1.7
SCAF11-212ENST00000549162 SELENOSQ9BQE4 189 aa4.45□□□□□ -1.7
SCAF11-212ENST00000549162 ELOVL6Q9H5J4 265 aa4.45□□□□□ -1.7
SCAF11-212ENST00000549162 GAREM1Q9H706 876 aa4.45□□□□□ -1.7
SCAF11-212ENST00000549162 CARS2Q9HA77 564 aaKnown RBP4.45□□□□□ -1.7
SCAF11-212ENST00000549162 SLC17A5Q9NRA2 495 aa4.45□□□□□ -1.7
SCAF11-212ENST00000549162 MUTYHQ9UIF7 546 aa4.45□□□□□ -1.7
SCAF11-212ENST00000549162 SHISA3A0PJX4 238 aa4.45□□□□□ -1.7
SCAF11-212ENST00000549162 CXCR6O00574 342 aa4.45□□□□□ -1.7
SCAF11-212ENST00000549162 UQCRBP14927 111 aa4.45□□□□□ -1.7
SCAF11-212ENST00000549162 HMOX2P30519 316 aa4.45□□□□□ -1.7
SCAF11-212ENST00000549162 NME5P56597 212 aa4.45□□□□□ -1.7
SCAF11-212ENST00000549162 NAE1Q13564 534 aa4.45□□□□□ -1.7
SCAF11-212ENST00000549162 NHLRC3Q5JS37 347 aa4.45□□□□□ -1.7
SCAF11-212ENST00000549162 AADACL4Q5VUY2 407 aa4.45□□□□□ -1.7
SCAF11-212ENST00000549162 TCTN3Q6NUS6 607 aa4.45□□□□□ -1.7
SCAF11-212ENST00000549162 PAOXQ6QHF9 649 aa4.45□□□□□ -1.7
SCAF11-212ENST00000549162 PXKQ7Z7A4 578 aa4.45□□□□□ -1.7
SCAF11-212ENST00000549162 RPS19BP1Q86WX3 136 aaKnown RBP4.45□□□□□ -1.7
SCAF11-212ENST00000549162 LILRA2Q8N149 483 aa4.45□□□□□ -1.7
SCAF11-212ENST00000549162 GAPTQ8N292 157 aa4.45□□□□□ -1.7
SCAF11-212ENST00000549162 RHOXF1Q8NHV9 184 aa4.45□□□□□ -1.7
SCAF11-212ENST00000549162 PPCDCQ96CD2 204 aa4.45□□□□□ -1.7
SCAF11-212ENST00000549162 ZNF607Q96SK3 696 aa4.45□□□□□ -1.7
SCAF11-212ENST00000549162 MRPS26Q9BYN8 205 aaKnown RBP4.45□□□□□ -1.7
SCAF11-212ENST00000549162 STRADBQ9C0K7 418 aa4.45□□□□□ -1.7
SCAF11-212ENST00000549162 PRDM13Q9H4Q3 707 aa4.45□□□□□ -1.7
SCAF11-212ENST00000549162 TPT1P8Q9HAU6 139 aa4.45□□□□□ -1.7
SCAF11-212ENST00000549162 NRIP3Q9NQ35 241 aa4.45□□□□□ -1.7
SCAF11-212ENST00000549162 ASB6Q9NWX5 421 aa4.45□□□□□ -1.7
SCAF11-212ENST00000549162 CCDC59Q9P031 241 aaKnown RBP4.45□□□□□ -1.7
SCAF11-212ENST00000549162 WARS2Q9UGM6 360 aaKnown RBP4.45□□□□□ -1.7
SCAF11-212ENST00000549162 UBE2J1Q9Y385 318 aaPredicted RBP4.45□□□□□ -1.7
SCAF11-212ENST00000549162 IGKV1D-42A0A075B6H8 117 aa4.45□□□□□ -1.7
SCAF11-212ENST00000549162 IGHV5-51A0A0C4DH38 117 aa4.45□□□□□ -1.7
SCAF11-212ENST00000549162 FFAR1O14842 300 aa4.45□□□□□ -1.7
SCAF11-212ENST00000549162 ERAL1O75616 437 aaKnown RBP4.45□□□□□ -1.7
SCAF11-212ENST00000549162 UGT2B17O75795 530 aa4.45□□□□□ -1.7
SCAF11-212ENST00000549162 NEBLO76041 1014 aa4.45□□□□□ -1.7
SCAF11-212ENST00000549162 SIX3O95343 332 aaPredicted RBP4.45□□□□□ -1.7
SCAF11-212ENST00000549162 COX5AP20674 150 aa4.45□□□□□ -1.7
SCAF11-212ENST00000549162 NTSP30990 170 aa4.45□□□□□ -1.7
SCAF11-212ENST00000549162 GPR4P46093 362 aa4.45□□□□□ -1.7
SCAF11-212ENST00000549162 THOP1P52888 689 aa4.45□□□□□ -1.7
SCAF11-212ENST00000549162 CAPZA1P52907 286 aa4.45□□□□□ -1.7
SCAF11-212ENST00000549162 CRISP3P54108 245 aa4.45□□□□□ -1.7
SCAF11-212ENST00000549162 FBXW4P57775 412 aa4.45□□□□□ -1.7
SCAF11-212ENST00000549162 MS4A2Q01362 244 aa4.45□□□□□ -1.7
SCAF11-212ENST00000549162 FOLH1Q04609 750 aa4.45□□□□□ -1.7
SCAF11-212ENST00000549162 IFI44LQ53G44 452 aa4.45□□□□□ -1.7
SCAF11-212ENST00000549162 COLEC12Q5KU26 742 aa4.45□□□□□ -1.7
SCAF11-212ENST00000549162 TUBA3EQ6PEY2 450 aa4.45□□□□□ -1.7
SCAF11-212ENST00000549162 ENPP7Q6UWV6 458 aa4.45□□□□□ -1.7
SCAF11-212ENST00000549162 TAS2R42Q7RTR8 314 aa4.45□□□□□ -1.7
SCAF11-212ENST00000549162 CPLX4Q7Z7G2 160 aa4.45□□□□□ -1.7
SCAF11-212ENST00000549162 LCN9Q8WX39 176 aa4.45□□□□□ -1.7
SCAF11-212ENST00000549162 ACOT11Q8WXI4 607 aaPredicted RBP4.45□□□□□ -1.7
SCAF11-212ENST00000549162 RAX2Q96IS3 184 aa4.45□□□□□ -1.7
SCAF11-212ENST00000549162 COG8Q96MW5 612 aa4.45□□□□□ -1.7
SCAF11-212ENST00000549162 TECTBQ96PL2 329 aa4.45□□□□□ -1.7
SCAF11-212ENST00000549162 SMIM14Q96QK8 99 aa4.45□□□□□ -1.7
SCAF11-212ENST00000549162 TIMP4Q99727 224 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms