RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 CBFBQ13951 182 aa13.1□□□□□ -0.31
DDX54-203ENST00000546869 SELPLGQ14242 412 aa13.1□□□□□ -0.31
DDX54-203ENST00000546869 CAPRIN1Q14444 709 aaKnown RBP13.1□□□□□ -0.31
DDX54-203ENST00000546869 PLPPR5Q32ZL2 321 aa13.1□□□□□ -0.31
DDX54-203ENST00000546869 LIN52Q52LA3 116 aa13.1□□□□□ -0.31
DDX54-203ENST00000546869 SLC25A53Q5H9E4 307 aa13.1□□□□□ -0.31
DDX54-203ENST00000546869 RNF220Q5VTB9 566 aa13.1□□□□□ -0.31
DDX54-203ENST00000546869 TMEM211Q6ICI0 200 aa13.1□□□□□ -0.31
DDX54-203ENST00000546869 ARPINQ7Z6K5 226 aa13.1□□□□□ -0.31
DDX54-203ENST00000546869 CALHM3Q86XJ0 350 aa13.1□□□□□ -0.31
DDX54-203ENST00000546869 PTOV1Q86YD1 416 aa13.1□□□□□ -0.31
DDX54-203ENST00000546869 ZNF614Q8N883 585 aa13.1□□□□□ -0.31
DDX54-203ENST00000546869 C11orf65Q8NCR3 313 aa13.1□□□□□ -0.31
DDX54-203ENST00000546869 HIPK4Q8NE63 616 aa13.1□□□□□ -0.31
DDX54-203ENST00000546869 OR52P1PQ8NH57 321 aa13.1□□□□□ -0.31
DDX54-203ENST00000546869 ZPLD1Q8TCW7 415 aa13.1□□□□□ -0.31
DDX54-203ENST00000546869 WDR60Q8WVS4 1066 aa13.1□□□□□ -0.31
DDX54-203ENST00000546869 SH3YL1Q96HL8 342 aaPredicted RBP13.1□□□□□ -0.31
DDX54-203ENST00000546869 SFXN2Q96NB2 322 aa13.1□□□□□ -0.31
DDX54-203ENST00000546869 UCN2Q96RP3 112 aa13.1□□□□□ -0.31
DDX54-203ENST00000546869 GPATCH1Q9BRR8 931 aaKnown RBP13.1□□□□□ -0.31
DDX54-203ENST00000546869 QRSL1Q9H0R6 528 aaKnown RBP13.1□□□□□ -0.31
DDX54-203ENST00000546869 ARMC7Q9H6L4 198 aa13.1□□□□□ -0.31
DDX54-203ENST00000546869 PNPLA3Q9NST1 481 aa13.1□□□□□ -0.31
DDX54-203ENST00000546869 STOML1Q9UBI4 398 aa13.1□□□□□ -0.31
DDX54-203ENST00000546869 TINAGQ9UJW2 476 aa13.1□□□□□ -0.31
DDX54-203ENST00000546869 GPC6Q9Y625 555 aaPredicted RBP13.1□□□□□ -0.31
DDX54-203ENST00000546869 AP4B1Q9Y6B7 739 aa13.1□□□□□ -0.31
DDX54-203ENST00000546869 GCN1Q92616 2671 aaKnown RBP13.09□□□□□ -0.31
DDX54-203ENST00000546869 ZGRF1Q86YA3 2104 aa13.09□□□□□ -0.31
DDX54-203ENST00000546869 OR2M5A3KFT3 312 aa13.09□□□□□ -0.31
DDX54-203ENST00000546869 CDHR4A6H8M9 788 aa13.09□□□□□ -0.31
DDX54-203ENST00000546869 CCL21O00585 134 aa13.09□□□□□ -0.31
DDX54-203ENST00000546869 ZNHIT1O43257 154 aa13.09□□□□□ -0.31
DDX54-203ENST00000546869 OIP5O43482 229 aa13.09□□□□□ -0.31
DDX54-203ENST00000546869 NTN1O95631 604 aa13.09□□□□□ -0.31
DDX54-203ENST00000546869 LDLRP01130 860 aa13.09□□□□□ -0.31
DDX54-203ENST00000546869 PABPC4LP0CB38 370 aaKnown RBP13.09□□□□□ -0.31
DDX54-203ENST00000546869 ESRRAP11474 423 aaPredicted RBP13.09□□□□□ -0.31
DDX54-203ENST00000546869 ZNF708P17019 499 aa13.09□□□□□ -0.31
DDX54-203ENST00000546869 PGCP20142 388 aa13.09□□□□□ -0.31
DDX54-203ENST00000546869 ACVR2AP27037 513 aa13.09□□□□□ -0.31
DDX54-203ENST00000546869 SLC6A8P48029 635 aa13.09□□□□□ -0.31
DDX54-203ENST00000546869 EEF1A1P68104 462 aaKnown RBP13.09□□□□□ -0.31
DDX54-203ENST00000546869 PLAURQ03405 335 aa13.09□□□□□ -0.31
DDX54-203ENST00000546869 SCARB2Q14108 478 aa13.09□□□□□ -0.31
DDX54-203ENST00000546869 LARS2Q15031 903 aaKnown RBP13.09□□□□□ -0.31
DDX54-203ENST00000546869 C8orf82Q6P1X6 216 aaPredicted RBP13.09□□□□□ -0.31
DDX54-203ENST00000546869 ADGRE4PQ86SQ3 457 aa13.09□□□□□ -0.31
DDX54-203ENST00000546869 ZNF440Q8IYI8 595 aa13.09□□□□□ -0.31
DDX54-203ENST00000546869 ULK2Q8IYT8 1036 aa13.09□□□□□ -0.31
DDX54-203ENST00000546869 POU5F2Q8N7G0 328 aa13.09□□□□□ -0.31
DDX54-203ENST00000546869 BHLHE22Q8NFJ8 381 aaPredicted RBP13.09□□□□□ -0.31
DDX54-203ENST00000546869 OR10A6Q8NH74 314 aa13.09□□□□□ -0.31
DDX54-203ENST00000546869 ST8SIA1Q92185 356 aa13.09□□□□□ -0.31
DDX54-203ENST00000546869 RCN3Q96D15 328 aa13.09□□□□□ -0.31
DDX54-203ENST00000546869 MRGPRX4Q96LA9 322 aa13.09□□□□□ -0.31
DDX54-203ENST00000546869 SPATA5L1Q9BVQ7 753 aa13.09□□□□□ -0.31
DDX54-203ENST00000546869 RPH3AQ9Y2J0 694 aaPredicted RBP13.09□□□□□ -0.31
DDX54-203ENST00000546869 ZNF337Q9Y3M9 751 aa13.09□□□□□ -0.31
DDX54-203ENST00000546869 NCKAP5O14513 1909 aa13.09□□□□□ -0.31
DDX54-203ENST00000546869 ZNF407Q9C0G0 2248 aa13.08□□□□□ -0.32
DDX54-203ENST00000546869 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.08□□□□□ -0.32
DDX54-203ENST00000546869 PRORSD1PA6NEY8 169 aa13.08□□□□□ -0.32
DDX54-203ENST00000546869 NDUFAB1O14561 156 aa13.08□□□□□ -0.32
DDX54-203ENST00000546869 AGFG2O95081 481 aa13.08□□□□□ -0.32
DDX54-203ENST00000546869 EPPINO95925 133 aa13.08□□□□□ -0.32
DDX54-203ENST00000546869 UBTFL6P0CB48 400 aaPredicted RBP13.08□□□□□ -0.32
DDX54-203ENST00000546869 PRKCAP17252 672 aa13.08□□□□□ -0.32
DDX54-203ENST00000546869 AGAP20933 346 aa13.08□□□□□ -0.32
DDX54-203ENST00000546869 ELK4P28324 431 aa13.08□□□□□ -0.32
DDX54-203ENST00000546869 PRKAR1BP31321 381 aa13.08□□□□□ -0.32
DDX54-203ENST00000546869 CLDN18P56856 261 aa13.08□□□□□ -0.32
DDX54-203ENST00000546869 PCBP3P57721 371 aaKnown RBP13.08□□□□□ -0.32
DDX54-203ENST00000546869 EEFSECP57772 596 aaKnown RBP13.08□□□□□ -0.32
DDX54-203ENST00000546869 RAC1P63000 192 aa13.08□□□□□ -0.32
DDX54-203ENST00000546869 VEZF1Q14119 521 aa13.08□□□□□ -0.32
DDX54-203ENST00000546869 CYP51A1Q16850 503 aa13.08□□□□□ -0.32
DDX54-203ENST00000546869 RABL3Q5HYI8 236 aa13.08□□□□□ -0.32
DDX54-203ENST00000546869 DCST1Q5T197 706 aa13.08□□□□□ -0.32
DDX54-203ENST00000546869 RAET1LQ5VY80 246 aa13.08□□□□□ -0.32
DDX54-203ENST00000546869 RTL6Q6ICC9 239 aa13.08□□□□□ -0.32
DDX54-203ENST00000546869 ZNF585AQ6P3V2 769 aa13.08□□□□□ -0.32
DDX54-203ENST00000546869 FJX1Q86VR8 437 aa13.08□□□□□ -0.32
DDX54-203ENST00000546869 KRT73Q86Y46 540 aa13.08□□□□□ -0.32
DDX54-203ENST00000546869 CCDC197Q8NCU1 140 aa13.08□□□□□ -0.32
DDX54-203ENST00000546869 OR5M9Q8NGP3 310 aa13.08□□□□□ -0.32
DDX54-203ENST00000546869 NFKBIDQ8NI38 313 aa13.08□□□□□ -0.32
DDX54-203ENST00000546869 POC1BQ8TC44 478 aa13.08□□□□□ -0.32
DDX54-203ENST00000546869 TMEM234Q8WY98 164 aa13.08□□□□□ -0.32
DDX54-203ENST00000546869 ZNF583Q96ND8 569 aa13.08□□□□□ -0.32
DDX54-203ENST00000546869 ZNF607Q96SK3 696 aa13.08□□□□□ -0.32
DDX54-203ENST00000546869 ECSITQ9BQ95 431 aa13.08□□□□□ -0.32
DDX54-203ENST00000546869 SLC39A3Q9BRY0 314 aa13.08□□□□□ -0.32
DDX54-203ENST00000546869 EVA1AQ9H8M9 152 aa13.08□□□□□ -0.32
DDX54-203ENST00000546869 CALHM2Q9HA72 323 aa13.08□□□□□ -0.32
DDX54-203ENST00000546869 CACYBPQ9HB71 228 aaKnown RBP13.08□□□□□ -0.32
DDX54-203ENST00000546869 DNAJB12Q9NXW2 375 aaKnown RBP13.08□□□□□ -0.32
DDX54-203ENST00000546869 TNFRSF10DQ9UBN6 386 aa13.08□□□□□ -0.32
DDX54-203ENST00000546869 ANGPT4Q9Y264 503 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms