RNA–Protein interactions for RNA: ENST00000546816.5

CCDC38-204, Transcript of coiled-coil domain containing 38, humanhuman

TSL 2

Gene CCDC38, Length 465 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-204ENST00000546816 ADAM12O43184 909 aa2.2□□□□□ -2.06
CCDC38-204ENST00000546816 ZNF264O43296 627 aa2.2□□□□□ -2.06
CCDC38-204ENST00000546816 ECI2O75521 394 aa2.2□□□□□ -2.06
CCDC38-204ENST00000546816 SLC4A1P02730 911 aa2.2□□□□□ -2.06
CCDC38-204ENST00000546816 ALPPP05187 535 aa2.2□□□□□ -2.06
CCDC38-204ENST00000546816 CD5P06127 495 aa2.2□□□□□ -2.06
CCDC38-204ENST00000546816 HBQ1P09105 142 aa2.2□□□□□ -2.06
CCDC38-204ENST00000546816 ALPPL2P10696 532 aa2.2□□□□□ -2.06
CCDC38-204ENST00000546816 ZNF823P16415 610 aa2.2□□□□□ -2.06
CCDC38-204ENST00000546816 MAGP20916 626 aa2.2□□□□□ -2.06
CCDC38-204ENST00000546816 IL10P22301 178 aa2.2□□□□□ -2.06
CCDC38-204ENST00000546816 ATP5A1P25705 553 aaKnown RBP2.2□□□□□ -2.06
CCDC38-204ENST00000546816 PRDX6P30041 224 aa2.2□□□□□ -2.06
CCDC38-204ENST00000546816 AKT2P31751 481 aa2.2□□□□□ -2.06
CCDC38-204ENST00000546816 ASMTP46597 345 aa2.2□□□□□ -2.06
CCDC38-204ENST00000546816 PLK1P53350 603 aa2.2□□□□□ -2.06
CCDC38-204ENST00000546816 SUCLG1P53597 346 aaKnown RBP2.2□□□□□ -2.06
CCDC38-204ENST00000546816 STARD6P59095 220 aa2.2□□□□□ -2.06
CCDC38-204ENST00000546816 GABPB1Q06547 395 aaPredicted RBP2.2□□□□□ -2.06
CCDC38-204ENST00000546816 RIPPLY1Q0D2K3 151 aa2.2□□□□□ -2.06
CCDC38-204ENST00000546816 LCA5Q86VQ0 697 aa2.2□□□□□ -2.06
CCDC38-204ENST00000546816 CERS5Q8N5B7 392 aa2.2□□□□□ -2.06
CCDC38-204ENST00000546816 XPO4Q9C0E2 1151 aaKnown RBP2.2□□□□□ -2.06
CCDC38-204ENST00000546816 POLR3FQ9H1D9 316 aaPredicted RBP2.2□□□□□ -2.06
CCDC38-204ENST00000546816 MRPL39Q9NYK5 338 aaKnown RBP2.2□□□□□ -2.06
CCDC38-204ENST00000546816 ZNF225Q9UK10 706 aa2.2□□□□□ -2.06
CCDC38-204ENST00000546816 USP16Q9Y5T5 823 aa2.2□□□□□ -2.06
CCDC38-204ENST00000546816 AP4B1Q9Y6B7 739 aa2.2□□□□□ -2.06
CCDC38-204ENST00000546816 A6NDX4 124 aa2.19□□□□□ -2.06
CCDC38-204ENST00000546816 LRRC30A6NM36 301 aa2.19□□□□□ -2.06
CCDC38-204ENST00000546816 K7N7A8 449 aa2.19□□□□□ -2.06
CCDC38-204ENST00000546816 AKR7A3O95154 331 aa2.19□□□□□ -2.06
CCDC38-204ENST00000546816 SNAPINO95295 136 aa2.19□□□□□ -2.06
CCDC38-204ENST00000546816 INSP01308 110 aa2.19□□□□□ -2.06
CCDC38-204ENST00000546816 MMP1P03956 469 aa2.19□□□□□ -2.06
CCDC38-204ENST00000546816 GSTT2P0CG29 244 aa2.19□□□□□ -2.06
CCDC38-204ENST00000546816 GSTT2BP0CG30 244 aa2.19□□□□□ -2.06
CCDC38-204ENST00000546816 RRASP10301 218 aa2.19□□□□□ -2.06
CCDC38-204ENST00000546816 SERPINA2P20848 420 aa2.19□□□□□ -2.06
CCDC38-204ENST00000546816 CCNCP24863 283 aa2.19□□□□□ -2.06
CCDC38-204ENST00000546816 AQP1P29972 269 aa2.19□□□□□ -2.06
CCDC38-204ENST00000546816 NTHL1P78549 312 aa2.19□□□□□ -2.06
CCDC38-204ENST00000546816 WASHC5Q12768 1159 aa2.19□□□□□ -2.06
CCDC38-204ENST00000546816 UNC119Q13432 240 aa2.19□□□□□ -2.06
CCDC38-204ENST00000546816 EXOSC2Q13868 293 aaKnown RBP2.19□□□□□ -2.06
CCDC38-204ENST00000546816 SYPL1Q16563 259 aa2.19□□□□□ -2.06
CCDC38-204ENST00000546816 OR6B2Q6IFH4 312 aa2.19□□□□□ -2.06
CCDC38-204ENST00000546816 SLC39A4Q6P5W5 647 aa2.19□□□□□ -2.06
CCDC38-204ENST00000546816 TMEM26Q6ZUK4 368 aa2.19□□□□□ -2.06
CCDC38-204ENST00000546816 FAM220AQ7Z4H9 259 aa2.19□□□□□ -2.06
CCDC38-204ENST00000546816 EFCAB13Q8IY85 973 aa2.19□□□□□ -2.06
CCDC38-204ENST00000546816 SAXO1Q8IYX7 474 aa2.19□□□□□ -2.06
CCDC38-204ENST00000546816 FAM71E2Q8N5Q1 922 aa2.19□□□□□ -2.06
CCDC38-204ENST00000546816 TMEM252Q8N6L7 170 aa2.19□□□□□ -2.06
CCDC38-204ENST00000546816 BCORP1Q8N888 145 aa2.19□□□□□ -2.06
CCDC38-204ENST00000546816 Q8N9W7 124 aa2.19□□□□□ -2.06
CCDC38-204ENST00000546816 VSTM2LQ96N03 204 aa2.19□□□□□ -2.06
CCDC38-204ENST00000546816 MCHR1Q99705 422 aa2.19□□□□□ -2.06
CCDC38-204ENST00000546816 TMEM121Q9BTD3 319 aa2.19□□□□□ -2.06
CCDC38-204ENST00000546816 TBCDQ9BTW9 1192 aa2.19□□□□□ -2.06
CCDC38-204ENST00000546816 NARFLQ9H6Q4 476 aa2.19□□□□□ -2.06
CCDC38-204ENST00000546816 WRAP73Q9P2S5 460 aaPredicted RBP2.19□□□□□ -2.06
CCDC38-204ENST00000546816 BTNL2Q9UIR0 455 aa2.19□□□□□ -2.06
CCDC38-204ENST00000546816 UBQLN1Q9UMX0 589 aaKnown RBP2.19□□□□□ -2.06
CCDC38-204ENST00000546816 IFT52Q9Y366 437 aa2.19□□□□□ -2.06
CCDC38-204ENST00000546816 SPACA6W5XKT8 324 aa2.19□□□□□ -2.06
CCDC38-204ENST00000546816 COL1A2P08123 1366 aa2.19□□□□□ -2.06
CCDC38-204ENST00000546816 IGLV4-69A0A075B6H9 119 aa2.18□□□□□ -2.06
CCDC38-204ENST00000546816 KIR2DL5BA0A0G2JN68 375 aa2.18□□□□□ -2.06
CCDC38-204ENST00000546816 KIR2DL5BA0A0G2JPC4 375 aa2.18□□□□□ -2.06
CCDC38-204ENST00000546816 OR6C65A6NJZ3 312 aa2.18□□□□□ -2.06
CCDC38-204ENST00000546816 A8MUA0 341 aa2.18□□□□□ -2.06
CCDC38-204ENST00000546816 TMX2-CTNND1H3BSU7 103 aa2.18□□□□□ -2.06
CCDC38-204ENST00000546816 CCER2I3L3R5 266 aa2.18□□□□□ -2.06
CCDC38-204ENST00000546816 LALBAP00709 142 aa2.18□□□□□ -2.06
CCDC38-204ENST00000546816 PCCAP05165 728 aaPredicted RBP2.18□□□□□ -2.06
CCDC38-204ENST00000546816 ZCCHC18P0CG32 403 aa2.18□□□□□ -2.06
CCDC38-204ENST00000546816 ANXA3P12429 323 aa2.18□□□□□ -2.06
CCDC38-204ENST00000546816 XRCC1P18887 633 aaPredicted RBP2.18□□□□□ -2.06
CCDC38-204ENST00000546816 TSPAN8P19075 237 aa2.18□□□□□ -2.06
CCDC38-204ENST00000546816 OAS2P29728 719 aaKnown RBP2.18□□□□□ -2.06
CCDC38-204ENST00000546816 PRDX3P30048 256 aaKnown RBP2.18□□□□□ -2.06
CCDC38-204ENST00000546816 HPDP32754 393 aaPredicted RBP2.18□□□□□ -2.06
CCDC38-204ENST00000546816 NOVA1P51513 510 aaKnown RBP2.18□□□□□ -2.06
CCDC38-204ENST00000546816 HERVK_113P61574 105 aa2.18□□□□□ -2.06
CCDC38-204ENST00000546816 CHRNB3Q05901 458 aa2.18□□□□□ -2.06
CCDC38-204ENST00000546816 SLC10A7Q0GE19 358 aa2.18□□□□□ -2.06
CCDC38-204ENST00000546816 NDUFA9Q16795 377 aa2.18□□□□□ -2.06
CCDC38-204ENST00000546816 TMEM52BQ4KMG9 183 aa2.18□□□□□ -2.06
CCDC38-204ENST00000546816 FAHD2BQ6P2I3 314 aaPredicted RBP2.18□□□□□ -2.06
CCDC38-204ENST00000546816 LRRC8BQ6P9F7 803 aa2.18□□□□□ -2.06
CCDC38-204ENST00000546816 RNF165Q6ZSG1 346 aa2.18□□□□□ -2.06
CCDC38-204ENST00000546816 LINC01551Q86U37 167 aa2.18□□□□□ -2.06
CCDC38-204ENST00000546816 ZNF429Q86V71 674 aa2.18□□□□□ -2.06
CCDC38-204ENST00000546816 ELMOD2Q8IZ81 293 aa2.18□□□□□ -2.06
CCDC38-204ENST00000546816 KIR2DL5AQ8N109 375 aa2.18□□□□□ -2.06
CCDC38-204ENST00000546816 LYPD1Q8N2G4 141 aa2.18□□□□□ -2.06
CCDC38-204ENST00000546816 MRPL43Q8N983 215 aaKnown RBP2.18□□□□□ -2.06
CCDC38-204ENST00000546816 FAHD2AQ96GK7 314 aa2.18□□□□□ -2.06
CCDC38-204ENST00000546816 FAM210BQ96KR6 192 aa2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms