RNA–Protein interactions for RNA: ENST00000545015.1

POLE-222, Transcript of DNA polymerase epsilon, catalytic subunit, human

TSL 2

Gene POLE, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLE-222	ENST00000545015	FAM71C	Q8NEG0	241 aa		12.03	□□□□□ -0.48
POLE-222	ENST00000545015	OR5W2	Q8NH69	310 aa		12.03	□□□□□ -0.48
POLE-222	ENST00000545015	OR10D3	Q8NH80	312 aa		12.03	□□□□□ -0.48
POLE-222	ENST00000545015	OR2V1	Q8NHB1	315 aa		12.03	□□□□□ -0.48
POLE-222	ENST00000545015	MRGPRX4	Q96LA9	322 aa		12.03	□□□□□ -0.48
POLE-222	ENST00000545015	DACH2	Q96NX9	599 aa		12.03	□□□□□ -0.48
POLE-222	ENST00000545015	LAT2	Q9GZY6	243 aa		12.03	□□□□□ -0.48
POLE-222	ENST00000545015	SDR39U1	Q9NRG7	319 aa	Predicted RBP	12.03	□□□□□ -0.48
POLE-222	ENST00000545015	GLRX2	Q9NS18	164 aa		12.03	□□□□□ -0.48
POLE-222	ENST00000545015	ZIM2	Q9NZV7	527 aa		12.03	□□□□□ -0.48
POLE-222	ENST00000545015	CARD8	Q9Y2G2	431 aa		12.03	□□□□□ -0.48
POLE-222	ENST00000545015	CCDC168	Q8NDH2	2452 aa		12.03	□□□□□ -0.48
POLE-222	ENST00000545015		A0A0J9YW62	118 aa		12.02	□□□□□ -0.49
POLE-222	ENST00000545015	GOLGA8Q	A0A0J9YX86	632 aa		12.02	□□□□□ -0.49
POLE-222	ENST00000545015	GOLGA8O	A6NCC3	632 aa		12.02	□□□□□ -0.49
POLE-222	ENST00000545015	GOLGA8N	F8WBI6	632 aa		12.02	□□□□□ -0.49
POLE-222	ENST00000545015	GTPBP1	O00178	669 aa	Known RBP	12.02	□□□□□ -0.49
POLE-222	ENST00000545015	EIF1AY	O14602	144 aa	Known RBP	12.02	□□□□□ -0.49
POLE-222	ENST00000545015	EFNA2	O43921	213 aa		12.02	□□□□□ -0.49
POLE-222	ENST00000545015	GMFG	O60234	142 aa		12.02	□□□□□ -0.49
POLE-222	ENST00000545015	SS18L1	O75177	396 aa	Predicted RBP	12.02	□□□□□ -0.49
POLE-222	ENST00000545015	AQP8	O94778	261 aa		12.02	□□□□□ -0.49
POLE-222	ENST00000545015	IL6	P05231	212 aa		12.02	□□□□□ -0.49
POLE-222	ENST00000545015	ZCCHC18	P0CG32	403 aa		12.02	□□□□□ -0.49
POLE-222	ENST00000545015	OR12D1	P0DN82	309 aa		12.02	□□□□□ -0.49
POLE-222	ENST00000545015	KIT	P10721	976 aa		12.02	□□□□□ -0.49
POLE-222	ENST00000545015	KHK	P50053	298 aa		12.02	□□□□□ -0.49
POLE-222	ENST00000545015	FOXF1	Q12946	379 aa		12.02	□□□□□ -0.49
POLE-222	ENST00000545015	SKP2	Q13309	424 aa		12.02	□□□□□ -0.49
POLE-222	ENST00000545015	SNTB1	Q13884	538 aa	Known RBP	12.02	□□□□□ -0.49
POLE-222	ENST00000545015	SGCB	Q16585	318 aa		12.02	□□□□□ -0.49
POLE-222	ENST00000545015	SLC9B1	Q4ZJI4	515 aa		12.02	□□□□□ -0.49
POLE-222	ENST00000545015	PDSS1	Q5T2R2	415 aa		12.02	□□□□□ -0.49
POLE-222	ENST00000545015	PDZK1	Q5T2W1	519 aa		12.02	□□□□□ -0.49
POLE-222	ENST00000545015	TYW3	Q6IPR3	259 aa	Known RBP	12.02	□□□□□ -0.49
POLE-222	ENST00000545015	VWA1	Q6PCB0	445 aa		12.02	□□□□□ -0.49
POLE-222	ENST00000545015	FAM214B	Q7L5A3	538 aa		12.02	□□□□□ -0.49
POLE-222	ENST00000545015	C16orf62	Q7Z3J2	963 aa		12.02	□□□□□ -0.49
POLE-222	ENST00000545015	BTLA	Q7Z6A9	289 aa		12.02	□□□□□ -0.49
POLE-222	ENST00000545015	LUZP2	Q86TE4	346 aa		12.02	□□□□□ -0.49
POLE-222	ENST00000545015	TMEM200A	Q86VY9	491 aa		12.02	□□□□□ -0.49
POLE-222	ENST00000545015	SMPDL3B	Q92485	455 aa		12.02	□□□□□ -0.49
POLE-222	ENST00000545015	PMM1	Q92871	262 aa		12.02	□□□□□ -0.49
POLE-222	ENST00000545015	NINJ1	Q92982	152 aa		12.02	□□□□□ -0.49
POLE-222	ENST00000545015	GMPPA	Q96IJ6	420 aa	Predicted RBP	12.02	□□□□□ -0.49
POLE-222	ENST00000545015	ATP6V1G3	Q96LB4	118 aa		12.02	□□□□□ -0.49
POLE-222	ENST00000545015	KLHL15	Q96M94	604 aa		12.02	□□□□□ -0.49
POLE-222	ENST00000545015	OR52E6	Q96RD3	313 aa		12.02	□□□□□ -0.49
POLE-222	ENST00000545015	SLC35A5	Q9BS91	424 aa		12.02	□□□□□ -0.49
POLE-222	ENST00000545015	VIPAS39	Q9H9C1	493 aa		12.02	□□□□□ -0.49
POLE-222	ENST00000545015	DNAJB12	Q9NXW2	375 aa	Known RBP	12.02	□□□□□ -0.49
POLE-222	ENST00000545015	ELOVL5	Q9NYP7	299 aa		12.02	□□□□□ -0.49
POLE-222	ENST00000545015	MCTS1	Q9ULC4	181 aa	Known RBP	12.02	□□□□□ -0.49
POLE-222	ENST00000545015	LIPT1	Q9Y234	373 aa		12.02	□□□□□ -0.49
POLE-222	ENST00000545015	SPG11	Q96JI7	2443 aa		12.02	□□□□□ -0.49
POLE-222	ENST00000545015	AKAP9	Q99996	3911 aa		12.02	□□□□□ -0.49
POLE-222	ENST00000545015	CENPVL1	A0A0U1RR11	272 aa		12.01	□□□□□ -0.49
POLE-222	ENST00000545015	PRAMEF27	A3QJZ7	478 aa		12.01	□□□□□ -0.49
POLE-222	ENST00000545015	CCDC154	A6NI56	674 aa		12.01	□□□□□ -0.49
POLE-222	ENST00000545015	GJE1	A6NN92	205 aa		12.01	□□□□□ -0.49
POLE-222	ENST00000545015	HMGN4	O00479	90 aa		12.01	□□□□□ -0.49
POLE-222	ENST00000545015	SLC22A3	O75751	556 aa		12.01	□□□□□ -0.49
POLE-222	ENST00000545015	TGDS	O95455	350 aa		12.01	□□□□□ -0.49
POLE-222	ENST00000545015	PGM1	P36871	562 aa		12.01	□□□□□ -0.49
POLE-222	ENST00000545015	EIF1AX	P47813	144 aa	Known RBP	12.01	□□□□□ -0.49
POLE-222	ENST00000545015	SLC6A8	P48029	635 aa		12.01	□□□□□ -0.49
POLE-222	ENST00000545015	CPA2	P48052	419 aa		12.01	□□□□□ -0.49
POLE-222	ENST00000545015	ANXA11	P50995	505 aa	Known RBP	12.01	□□□□□ -0.49
POLE-222	ENST00000545015	CBFB	Q13951	182 aa		12.01	□□□□□ -0.49
POLE-222	ENST00000545015	GPR68	Q15743	365 aa		12.01	□□□□□ -0.49
POLE-222	ENST00000545015	TOMM34	Q15785	309 aa	Predicted RBP	12.01	□□□□□ -0.49
POLE-222	ENST00000545015	MAPK14	Q16539	360 aa		12.01	□□□□□ -0.49
POLE-222	ENST00000545015	TNFAIP8L2	Q6P589	184 aa	Predicted RBP	12.01	□□□□□ -0.49
POLE-222	ENST00000545015	ZNF474	Q6S9Z5	364 aa	Predicted RBP	12.01	□□□□□ -0.49
POLE-222	ENST00000545015	EPGN	Q6UW88	154 aa		12.01	□□□□□ -0.49
POLE-222	ENST00000545015	FRRS1	Q6ZNA5	592 aa		12.01	□□□□□ -0.49
POLE-222	ENST00000545015	LILRA2	Q8N149	483 aa		12.01	□□□□□ -0.49
POLE-222	ENST00000545015	OR6K3	Q8NGY3	331 aa		12.01	□□□□□ -0.49
POLE-222	ENST00000545015	FBXO27	Q8NI29	283 aa		12.01	□□□□□ -0.49
POLE-222	ENST00000545015	XAGE5	Q8WWM1	108 aa		12.01	□□□□□ -0.49
POLE-222	ENST00000545015	ST8SIA1	Q92185	356 aa		12.01	□□□□□ -0.49
POLE-222	ENST00000545015	ZNF524	Q96C55	264 aa		12.01	□□□□□ -0.49
POLE-222	ENST00000545015	ROPN1L	Q96C74	230 aa		12.01	□□□□□ -0.49
POLE-222	ENST00000545015	TRNT1	Q96Q11	434 aa	Known RBP	12.01	□□□□□ -0.49
POLE-222	ENST00000545015	PANX1	Q96RD7	426 aa		12.01	□□□□□ -0.49
POLE-222	ENST00000545015	ZBTB18	Q99592	522 aa		12.01	□□□□□ -0.49
POLE-222	ENST00000545015	GPATCH1	Q9BRR8	931 aa	Known RBP	12.01	□□□□□ -0.49
POLE-222	ENST00000545015	POLDIP3	Q9BY77	421 aa	Known RBP	12.01	□□□□□ -0.49
POLE-222	ENST00000545015	CLEC4M	Q9H2X3	399 aa	Predicted RBP	12.01	□□□□□ -0.49
POLE-222	ENST00000545015	GP6	Q9HCN6	339 aa		12.01	□□□□□ -0.49
POLE-222	ENST00000545015	PLSCR4	Q9NRQ2	329 aa		12.01	□□□□□ -0.49
POLE-222	ENST00000545015	PRDM4	Q9UKN5	801 aa		12.01	□□□□□ -0.49
POLE-222	ENST00000545015	MKLN1	Q9UL63	735 aa		12.01	□□□□□ -0.49
POLE-222	ENST00000545015	SLC35A3	Q9Y2D2	325 aa		12.01	□□□□□ -0.49
POLE-222	ENST00000545015	WDR45	Q9Y484	360 aa		12.01	□□□□□ -0.49
POLE-222	ENST00000545015	USH1C	Q9Y6N9	552 aa		12.01	□□□□□ -0.49
POLE-222	ENST00000545015	TNFSF11	O14788	317 aa		12	□□□□□ -0.49
POLE-222	ENST00000545015	UBD	O15205	165 aa		12	□□□□□ -0.49
POLE-222	ENST00000545015	CXCL13	O43927	109 aa		12	□□□□□ -0.49
POLE-222	ENST00000545015	CSTA	P01040	98 aa		12	□□□□□ -0.49

Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms