RNA–Protein interactions for RNA: ENST00000543727.5

TSFM-208, Transcript of Ts translation elongation factor, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene TSFM, Length 651 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSFM-208ENST00000543727 RUBCNLQ9H714 662 aa16.18■□□□□ 0.18
TSFM-208ENST00000543727 CALHM2Q9HA72 323 aa16.18■□□□□ 0.18
TSFM-208ENST00000543727 TNFRSF10DQ9UBN6 386 aa16.18■□□□□ 0.18
TSFM-208ENST00000543727 VDAC3Q9Y277 283 aa16.18■□□□□ 0.18
TSFM-208ENST00000543727 RPH3AQ9Y2J0 694 aaPredicted RBP16.18■□□□□ 0.18
TSFM-208ENST00000543727 IFT52Q9Y366 437 aa16.18■□□□□ 0.18
TSFM-208ENST00000543727 DOCK7Q96N67 2140 aa16.18■□□□□ 0.18
TSFM-208ENST00000543727 PCNX1Q96RV3 2341 aa16.17■□□□□ 0.18
TSFM-208ENST00000543727 C5orf58C9J3I9 102 aa16.17■□□□□ 0.18
TSFM-208ENST00000543727 H0Y3Z8 333 aa16.17■□□□□ 0.18
TSFM-208ENST00000543727 ETV2O00321 342 aaPredicted RBP16.17■□□□□ 0.18
TSFM-208ENST00000543727 NUDT14O95848 222 aa16.17■□□□□ 0.18
TSFM-208ENST00000543727 LINGO3P0C6S8 592 aa16.17■□□□□ 0.18
TSFM-208ENST00000543727 ARAFP10398 606 aa16.17■□□□□ 0.18
TSFM-208ENST00000543727 ETS2P15036 469 aa16.17■□□□□ 0.18
TSFM-208ENST00000543727 IL7RP16871 459 aa16.17■□□□□ 0.18
TSFM-208ENST00000543727 PGCP20142 388 aa16.17■□□□□ 0.18
TSFM-208ENST00000543727 DRD4P21917 467 aa16.17■□□□□ 0.18
TSFM-208ENST00000543727 ME2P23368 584 aa16.17■□□□□ 0.18
TSFM-208ENST00000543727 TIMP3P35625 211 aa16.17■□□□□ 0.18
TSFM-208ENST00000543727 PGM1P36871 562 aa16.17■□□□□ 0.18
TSFM-208ENST00000543727 CLDN18P56856 261 aa16.17■□□□□ 0.18
TSFM-208ENST00000543727 LARS2Q15031 903 aaKnown RBP16.17■□□□□ 0.18
TSFM-208ENST00000543727 MAPK11Q15759 364 aa16.17■□□□□ 0.18
TSFM-208ENST00000543727 MAPK14Q16539 360 aa16.17■□□□□ 0.18
TSFM-208ENST00000543727 LIN52Q52LA3 116 aa16.17■□□□□ 0.18
TSFM-208ENST00000543727 SLC25A53Q5H9E4 307 aa16.17■□□□□ 0.18
TSFM-208ENST00000543727 DCST1Q5T197 706 aa16.17■□□□□ 0.18
TSFM-208ENST00000543727 RIPPLY2Q5TAB7 128 aa16.17■□□□□ 0.18
TSFM-208ENST00000543727 NSUN5P2Q63ZY6 315 aa16.17■□□□□ 0.18
TSFM-208ENST00000543727 RTL6Q6ICC9 239 aa16.17■□□□□ 0.18
TSFM-208ENST00000543727 CBLN3Q6UW01 205 aa16.17■□□□□ 0.18
TSFM-208ENST00000543727 C3P1Q6ZMU1 363 aa16.17■□□□□ 0.18
TSFM-208ENST00000543727 MRGPRGQ86SM5 289 aa16.17■□□□□ 0.18
TSFM-208ENST00000543727 SLC30A8Q8IWU4 369 aa16.17■□□□□ 0.18
TSFM-208ENST00000543727 ZNF440Q8IYI8 595 aa16.17■□□□□ 0.18
TSFM-208ENST00000543727 TMCO5AQ8N6Q1 288 aa16.17■□□□□ 0.18
TSFM-208ENST00000543727 RP9Q8TA86 221 aaKnown RBP16.17■□□□□ 0.18
TSFM-208ENST00000543727 GPR119Q8TDV5 335 aa16.17■□□□□ 0.18
TSFM-208ENST00000543727 TMEM234Q8WY98 164 aa16.17■□□□□ 0.18
TSFM-208ENST00000543727 SLC35B4Q969S0 331 aa16.17■□□□□ 0.18
TSFM-208ENST00000543727 TMEM19Q96HH6 336 aa16.17■□□□□ 0.18
TSFM-208ENST00000543727 ZFP3Q96NJ6 502 aa16.17■□□□□ 0.18
TSFM-208ENST00000543727 PAQR5Q9NXK6 330 aaPredicted RBP16.17■□□□□ 0.18
TSFM-208ENST00000543727 PTPN13Q12923 2485 aa16.17■□□□□ 0.18
TSFM-208ENST00000543727 MED12Q93074 2177 aa16.16■□□□□ 0.18
TSFM-208ENST00000543727 FBP2O00757 339 aa16.16■□□□□ 0.18
TSFM-208ENST00000543727 UBTFL6P0CB48 400 aaPredicted RBP16.16■□□□□ 0.18
TSFM-208ENST00000543727 RBBP4Q09028 425 aa16.16■□□□□ 0.18
TSFM-208ENST00000543727 ART3Q13508 389 aa16.16■□□□□ 0.18
TSFM-208ENST00000543727 RNF220Q5VTB9 566 aa16.16■□□□□ 0.18
TSFM-208ENST00000543727 REEP3Q6NUK4 255 aa16.16■□□□□ 0.18
TSFM-208ENST00000543727 ADGRE4PQ86SQ3 457 aa16.16■□□□□ 0.18
TSFM-208ENST00000543727 SERPINA11Q86U17 422 aa16.16■□□□□ 0.18
TSFM-208ENST00000543727 KRT73Q86Y46 540 aa16.16■□□□□ 0.18
TSFM-208ENST00000543727 GRAMD2AQ8IUY3 354 aa16.16■□□□□ 0.18
TSFM-208ENST00000543727 MARVELD2Q8N4S9 558 aa16.16■□□□□ 0.18
TSFM-208ENST00000543727 OR8J3Q8NGG0 315 aa16.16■□□□□ 0.18
TSFM-208ENST00000543727 SPATA5L1Q9BVQ7 753 aa16.16■□□□□ 0.18
TSFM-208ENST00000543727 GID8Q9NWU2 228 aa16.16■□□□□ 0.18
TSFM-208ENST00000543727 ZNF232Q9UNY5 417 aa16.16■□□□□ 0.18
TSFM-208ENST00000543727 KLF2Q9Y5W3 355 aaPredicted RBP16.16■□□□□ 0.18
TSFM-208ENST00000543727 SPTBN1Q01082 2364 aaKnown RBP16.16■□□□□ 0.18
TSFM-208ENST00000543727 CACNA1CQ13936 2221 aa16.15■□□□□ 0.18
TSFM-208ENST00000543727 USP9YO00507 2555 aaPredicted RBP16.15■□□□□ 0.18
TSFM-208ENST00000543727 CENPVL1A0A0U1RR11 272 aa16.15■□□□□ 0.18
TSFM-208ENST00000543727 GJE1A6NN92 205 aa16.15■□□□□ 0.18
TSFM-208ENST00000543727 FAAHO00519 579 aa16.15■□□□□ 0.18
TSFM-208ENST00000543727 MRASO14807 208 aa16.15■□□□□ 0.18
TSFM-208ENST00000543727 GLI4P10075 376 aa16.15■□□□□ 0.18
TSFM-208ENST00000543727 UQCRBP14927 111 aa16.15■□□□□ 0.18
TSFM-208ENST00000543727 CD1EP15812 388 aa16.15■□□□□ 0.18
TSFM-208ENST00000543727 SLC6A2P23975 617 aa16.15■□□□□ 0.18
TSFM-208ENST00000543727 PSMA4P25789 261 aaKnown RBP16.15■□□□□ 0.18
TSFM-208ENST00000543727 CHRNB4P30926 498 aa16.15■□□□□ 0.18
TSFM-208ENST00000543727 DLX5P56178 289 aa16.15■□□□□ 0.18
TSFM-208ENST00000543727 NUP107P57740 925 aa16.15■□□□□ 0.18
TSFM-208ENST00000543727 RPS3AP61247 264 aaKnown RBP16.15■□□□□ 0.18
TSFM-208ENST00000543727 RAC1P63000 192 aa16.15■□□□□ 0.18
TSFM-208ENST00000543727 CDK6Q00534 326 aa16.15■□□□□ 0.18
TSFM-208ENST00000543727 PMPCAQ10713 525 aa16.15■□□□□ 0.18
TSFM-208ENST00000543727 REP15Q6BDI9 236 aa16.15■□□□□ 0.18
TSFM-208ENST00000543727 CHMP1BQ7LBR1 199 aa16.15■□□□□ 0.18
TSFM-208ENST00000543727 MAMDC2Q7Z304 686 aaPredicted RBP16.15■□□□□ 0.18
TSFM-208ENST00000543727 SNX32Q86XE0 403 aa16.15■□□□□ 0.18
TSFM-208ENST00000543727 C11orf65Q8NCR3 313 aa16.15■□□□□ 0.18
TSFM-208ENST00000543727 BHLHE22Q8NFJ8 381 aaPredicted RBP16.15■□□□□ 0.18
TSFM-208ENST00000543727 OR52P1PQ8NH57 321 aa16.15■□□□□ 0.18
TSFM-208ENST00000543727 ZG16BQ96DA0 208 aa16.15■□□□□ 0.18
TSFM-208ENST00000543727 RNF145Q96MT1 663 aa16.15■□□□□ 0.18
TSFM-208ENST00000543727 TM9SF2Q99805 663 aa16.15■□□□□ 0.18
TSFM-208ENST00000543727 THUMPD3Q9BV44 507 aaKnown RBP16.15■□□□□ 0.18
TSFM-208ENST00000543727 FAM107BQ9H098 131 aa16.15■□□□□ 0.18
TSFM-208ENST00000543727 IKZF5Q9H5V7 419 aa16.15■□□□□ 0.18
TSFM-208ENST00000543727 ALKBH4Q9NXW9 302 aa16.15■□□□□ 0.18
TSFM-208ENST00000543727 FAM53CQ9NYF3 392 aa16.15■□□□□ 0.18
TSFM-208ENST00000543727 AP3M1Q9Y2T2 418 aa16.15■□□□□ 0.18
TSFM-208ENST00000543727 ZNF337Q9Y3M9 751 aa16.15■□□□□ 0.18
TSFM-208ENST00000543727 KIAA1549Q9HCM3 1950 aa16.15■□□□□ 0.18
TSFM-208ENST00000543727 SPTAN1Q13813 2472 aaKnown RBP16.14■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms