RNA–Protein interactions for RNA: ENST00000543359.5

TNFRSF1A-215, Transcript of TNF receptor superfamily member 1A, human

TSL 3

Gene TNFRSF1A, Length 627 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TNFRSF1A-215	ENST00000543359	UFM1	P61960	85 aa		11.74	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	FUT5	Q11128	374 aa		11.74	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	FOXF1	Q12946	379 aa		11.74	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	ZNF141	Q15928	474 aa		11.74	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	MAPK14	Q16539	360 aa		11.74	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	SLC25A53	Q5H9E4	307 aa		11.74	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	PDZK1	Q5T2W1	519 aa		11.74	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	ANXA8L1	Q5VT79	327 aa		11.74	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	SAXO2	Q658L1	398 aa		11.74	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	ESPNL	Q6ZVH7	1005 aa		11.74	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	FAM214B	Q7L5A3	538 aa		11.74	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	ZNF610	Q8N9Z0	462 aa		11.74	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	ZNF527	Q8NB42	609 aa		11.74	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	OR4A15	Q8NGL6	344 aa		11.74	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	OR2V1	Q8NHB1	315 aa		11.74	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	ZG16B	Q96DA0	208 aa		11.74	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	ARSG	Q96EG1	525 aa		11.74	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	NEURL3	Q96EH8	262 aa		11.74	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	CCDC115	Q96NT0	180 aa		11.74	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	WFIKKN1	Q96NZ8	548 aa		11.74	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	FOXC2	Q99958	501 aa		11.74	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	ZNF350	Q9GZX5	532 aa		11.74	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	SAP130	Q9H0E3	1048 aa		11.74	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	TMEM185B	Q9H7F4	350 aa		11.74	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	TMBIM4	Q9HC24	238 aa		11.74	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	AIG1	Q9NVV5	245 aa		11.74	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	SH3D21	A4FU49	640 aa		11.73	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	SERINC4	A6NH21	518 aa		11.73	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	DUXA	A6NLW8	204 aa		11.73	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	TNFSF11	O14788	317 aa		11.73	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	HDAC3	O15379	428 aa		11.73	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	CXCL13	O43927	109 aa		11.73	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	SS18L1	O75177	396 aa	Predicted RBP	11.73	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	UGT2B17	O75795	530 aa		11.73	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	SMNDC1	O75940	238 aa	Known RBP eCLIP	11.73	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	GOSR1	O95249	250 aa		11.73	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	CPSF4	O95639	269 aa	Known RBP	11.73	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	AK1	P00568	194 aa		11.73	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	OR12D1	P0DN82	309 aa		11.73	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	PRKCA	P17252	672 aa		11.73	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	EPHA3	P29320	983 aa		11.73	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	SOAT1	P35610	550 aa		11.73	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	UGT2B10	P36537	528 aa		11.73	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	CPOX	P36551	454 aa		11.73	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	CLNS1A	P54105	237 aa	Known RBP	11.73	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	SUMO3	P55854	103 aa	Predicted RBP	11.73	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	NME5	P56597	212 aa		11.73	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	SIRPA	P78324	504 aa		11.73	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	FGFBP1	Q14512	234 aa		11.73	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	SGCB	Q16585	318 aa		11.73	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	FAM174B	Q3ZCQ3	159 aa		11.73	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	TYW3	Q6IPR3	259 aa	Known RBP	11.73	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	MAVS	Q7Z434	540 aa		11.73	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	LILRA2	Q8N149	483 aa		11.73	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	OR5W2	Q8NH69	310 aa		11.73	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	FBXO27	Q8NI29	283 aa		11.73	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	GMPPA	Q96IJ6	420 aa	Predicted RBP	11.73	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	MAEL	Q96JY0	434 aa	Known RBP	11.73	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	SLC35G5	Q96KT7	338 aa		11.73	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	MARK4	Q96L34	752 aa		11.73	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	KLHL15	Q96M94	604 aa		11.73	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	OR51I1	Q9H343	314 aa		11.73	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	WDR55	Q9H6Y2	383 aa	Predicted RBP	11.73	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	PLSCR4	Q9NRQ2	329 aa		11.73	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	CCM2L	Q9NUG4	571 aa	Predicted RBP	11.73	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	ELOVL5	Q9NYP7	299 aa		11.73	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	STOML1	Q9UBI4	398 aa		11.73	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	BTNL2	Q9UIR0	455 aa		11.73	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	MKLN1	Q9UL63	735 aa		11.73	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	GPC6	Q9Y625	555 aa	Predicted RBP	11.73	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	DEFB108A	A8MXU0	73 aa		11.72	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359		C9JVG2	144 aa		11.72	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359		E9PBE3	544 aa		11.72	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359		H3BNH8	94 aa		11.72	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	ZNF264	O43296	627 aa		11.72	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	EIF4E2	O60573	245 aa	Known RBP	11.72	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	BCAS1	O75363	584 aa	Predicted RBP	11.72	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	STX11	O75558	287 aa		11.72	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	FCGR2A	P12318	317 aa		11.72	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	ELK4	P28324	431 aa		11.72	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	PLAUR	Q03405	335 aa		11.72	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	SKP2	Q13309	424 aa		11.72	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	DPY19L1	Q2PZI1	675 aa		11.72	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	HBM	Q6B0K9	141 aa		11.72	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	PAMR1	Q6UXH9	720 aa		11.72	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	SPATA19	Q7Z5L4	167 aa		11.72	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	FAM71C	Q8NEG0	241 aa		11.72	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	RAB3IL1	Q8TBN0	382 aa		11.72	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	MGARP	Q8TDB4	240 aa		11.72	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	OSTF1	Q92882	214 aa		11.72	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	INPP5K	Q9BT40	448 aa		11.72	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	SRXN1	Q9BYN0	137 aa		11.72	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	LAT2	Q9GZY6	243 aa		11.72	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	COQ10B	Q9H8M1	238 aa		11.72	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	PAQR5	Q9NXK6	330 aa	Predicted RBP	11.72	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	MARCO	Q9UEW3	520 aa	Predicted RBP	11.72	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	CLEC4A	Q9UMR7	237 aa		11.72	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	PCDHGB4	Q9UN71	923 aa		11.72	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	PLEKHA6	Q9Y2H5	1048 aa		11.72	□□□□□ -0.53
TNFRSF1A-215	ENST00000543359	GOLGA8Q	A0A0J9YX86	632 aa		11.71	□□□□□ -0.53

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