RNA–Protein interactions for RNA: ENST00000542848.5

PTPN6-219, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 5

Gene PTPN6, Length 656 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-219ENST00000542848 LINGO3P0C6S8 592 aa10.57□□□□□ -0.72
PTPN6-219ENST00000542848 NID1P14543 1247 aa10.57□□□□□ -0.72
PTPN6-219ENST00000542848 ELK4P28324 431 aa10.57□□□□□ -0.72
PTPN6-219ENST00000542848 ATP5J2P56134 94 aa10.57□□□□□ -0.72
PTPN6-219ENST00000542848 POU6F2P78424 691 aaPredicted RBP10.57□□□□□ -0.72
PTPN6-219ENST00000542848 CAPRIN1Q14444 709 aaKnown RBP10.57□□□□□ -0.72
PTPN6-219ENST00000542848 RNPS1Q15287 305 aaKnown RBP10.57□□□□□ -0.72
PTPN6-219ENST00000542848 RFTN2Q52LD8 501 aaPredicted RBP10.57□□□□□ -0.72
PTPN6-219ENST00000542848 TMEM201Q5SNT2 666 aa10.57□□□□□ -0.72
PTPN6-219ENST00000542848 HHATQ5VTY9 493 aa10.57□□□□□ -0.72
PTPN6-219ENST00000542848 SZRD1Q7Z422 152 aa10.57□□□□□ -0.72
PTPN6-219ENST00000542848 R3HCC1LQ7Z5L2 792 aaKnown RBP10.57□□□□□ -0.72
PTPN6-219ENST00000542848 ANKRD42Q8N9B4 389 aa10.57□□□□□ -0.72
PTPN6-219ENST00000542848 CCDC63Q8NA47 563 aa10.57□□□□□ -0.72
PTPN6-219ENST00000542848 OR2T11Q8NH01 316 aa10.57□□□□□ -0.72
PTPN6-219ENST00000542848 FBXO30Q8TB52 745 aa10.57□□□□□ -0.72
PTPN6-219ENST00000542848 RAB3IL1Q8TBN0 382 aa10.57□□□□□ -0.72
PTPN6-219ENST00000542848 RNF128Q8TEB7 428 aa10.57□□□□□ -0.72
PTPN6-219ENST00000542848 ROBO4Q8WZ75 1007 aa10.57□□□□□ -0.72
PTPN6-219ENST00000542848 AKAP1Q92667 903 aaKnown RBP eCLIP10.57□□□□□ -0.72
PTPN6-219ENST00000542848 CPNE4Q96A23 557 aaPredicted RBP10.57□□□□□ -0.72
PTPN6-219ENST00000542848 SH3YL1Q96HL8 342 aaPredicted RBP10.57□□□□□ -0.72
PTPN6-219ENST00000542848 TSSK3Q96PN8 268 aa10.57□□□□□ -0.72
PTPN6-219ENST00000542848 USB1Q9BQ65 265 aaKnown RBP10.57□□□□□ -0.72
PTPN6-219ENST00000542848 TACO1Q9BSH4 297 aaKnown RBP10.57□□□□□ -0.72
PTPN6-219ENST00000542848 TRMOQ9BU70 441 aa10.57□□□□□ -0.72
PTPN6-219ENST00000542848 HOXD1Q9GZZ0 328 aa10.57□□□□□ -0.72
PTPN6-219ENST00000542848 NSRP1Q9H0G5 558 aaKnown RBP10.57□□□□□ -0.72
PTPN6-219ENST00000542848 C12orf49Q9H741 205 aa10.57□□□□□ -0.72
PTPN6-219ENST00000542848 TMEM185BQ9H7F4 350 aa10.57□□□□□ -0.72
PTPN6-219ENST00000542848 GP6Q9HCN6 339 aa10.57□□□□□ -0.72
PTPN6-219ENST00000542848 DUSP22Q9NRW4 184 aa10.57□□□□□ -0.72
PTPN6-219ENST00000542848 BAIAP2L1Q9UHR4 511 aa10.57□□□□□ -0.72
PTPN6-219ENST00000542848 SNX8Q9Y5X2 465 aa10.57□□□□□ -0.72
PTPN6-219ENST00000542848 PTGDR2Q9Y5Y4 395 aa10.57□□□□□ -0.72
PTPN6-219ENST00000542848 FBN1P35555 2871 aaKnown RBP10.57□□□□□ -0.72
PTPN6-219ENST00000542848 OVOL3O00110 214 aa10.56□□□□□ -0.72
PTPN6-219ENST00000542848 LSM1O15116 133 aaKnown RBP10.56□□□□□ -0.72
PTPN6-219ENST00000542848 EFNA2O43921 213 aa10.56□□□□□ -0.72
PTPN6-219ENST00000542848 GCM2O75603 506 aaPredicted RBP10.56□□□□□ -0.72
PTPN6-219ENST00000542848 PRKD3O94806 890 aa10.56□□□□□ -0.72
PTPN6-219ENST00000542848 HMGN2P05204 90 aaKnown RBP10.56□□□□□ -0.72
PTPN6-219ENST00000542848 FGF4P08620 206 aa10.56□□□□□ -0.72
PTPN6-219ENST00000542848 LINC00032P0C843 101 aa10.56□□□□□ -0.72
PTPN6-219ENST00000542848 RPS4XP62701 263 aaKnown RBP10.56□□□□□ -0.72
PTPN6-219ENST00000542848 RPL38P63173 70 aaKnown RBP10.56□□□□□ -0.72
PTPN6-219ENST00000542848 GNGT1P63211 74 aa10.56□□□□□ -0.72
PTPN6-219ENST00000542848 TNK1Q13470 666 aa10.56□□□□□ -0.72
PTPN6-219ENST00000542848 CD226Q15762 336 aa10.56□□□□□ -0.72
PTPN6-219ENST00000542848 ETFDHQ16134 617 aa10.56□□□□□ -0.72
PTPN6-219ENST00000542848 ZNF239Q16600 458 aaKnown RBP10.56□□□□□ -0.72
PTPN6-219ENST00000542848 KLHL26Q53HC5 615 aa10.56□□□□□ -0.72
PTPN6-219ENST00000542848 NCMAPQ5T1S8 102 aa10.56□□□□□ -0.72
PTPN6-219ENST00000542848 SFRP5Q5T4F7 317 aa10.56□□□□□ -0.72
PTPN6-219ENST00000542848 CCNJQ5T5M9 372 aa10.56□□□□□ -0.72
PTPN6-219ENST00000542848 C10orf107Q8IVU9 208 aa10.56□□□□□ -0.72
PTPN6-219ENST00000542848 TUSC5Q8IXB3 177 aa10.56□□□□□ -0.72
PTPN6-219ENST00000542848 GABRG1Q8N1C3 465 aa10.56□□□□□ -0.72
PTPN6-219ENST00000542848 PHOSPHO1Q8TCT1 267 aa10.56□□□□□ -0.72
PTPN6-219ENST00000542848 HSD17B8Q92506 261 aa10.56□□□□□ -0.72
PTPN6-219ENST00000542848 S100PBPQ96BU1 408 aa10.56□□□□□ -0.72
PTPN6-219ENST00000542848 FAM120BQ96EK7 910 aaKnown RBP10.56□□□□□ -0.72
PTPN6-219ENST00000542848 MDFIQ99750 246 aa10.56□□□□□ -0.72
PTPN6-219ENST00000542848 KLHDC3Q9BQ90 382 aa10.56□□□□□ -0.72
PTPN6-219ENST00000542848 PIGUQ9H490 435 aa10.56□□□□□ -0.72
PTPN6-219ENST00000542848 TUBB1Q9H4B7 451 aa10.56□□□□□ -0.72
PTPN6-219ENST00000542848 NGBQ9NPG2 151 aa10.56□□□□□ -0.72
PTPN6-219ENST00000542848 ZCCHC3Q9NUD5 404 aaKnown RBP10.56□□□□□ -0.72
PTPN6-219ENST00000542848 KLHL13Q9P2N7 655 aa10.56□□□□□ -0.72
PTPN6-219ENST00000542848 ATP6V1HQ9UI12 483 aa10.56□□□□□ -0.72
PTPN6-219ENST00000542848 LAMP3Q9UQV4 416 aa10.56□□□□□ -0.72
PTPN6-219ENST00000542848 DNAJC15Q9Y5T4 150 aa10.56□□□□□ -0.72
PTPN6-219ENST00000542848 GPC6Q9Y625 555 aaPredicted RBP10.56□□□□□ -0.72
PTPN6-219ENST00000542848 FBN3Q75N90 2809 aa10.55□□□□□ -0.72
PTPN6-219ENST00000542848 H3BNH8 94 aa10.55□□□□□ -0.72
PTPN6-219ENST00000542848 ZNF195O14628 629 aa10.55□□□□□ -0.72
PTPN6-219ENST00000542848 BIRC5O15392 142 aa10.55□□□□□ -0.72
PTPN6-219ENST00000542848 TRIM13O60858 407 aa10.55□□□□□ -0.72
PTPN6-219ENST00000542848 SPAG7O75391 227 aa10.55□□□□□ -0.72
PTPN6-219ENST00000542848 CD3EP07766 207 aa10.55□□□□□ -0.72
PTPN6-219ENST00000542848 YES1P07947 543 aa10.55□□□□□ -0.72
PTPN6-219ENST00000542848 BCKDHAP12694 445 aa10.55□□□□□ -0.72
PTPN6-219ENST00000542848 CREB1P16220 341 aa10.55□□□□□ -0.72
PTPN6-219ENST00000542848 ATP6V1C1P21283 382 aa10.55□□□□□ -0.72
PTPN6-219ENST00000542848 SHC1P29353 583 aa10.55□□□□□ -0.72
PTPN6-219ENST00000542848 LSP1P33241 339 aa10.55□□□□□ -0.72
PTPN6-219ENST00000542848 SFTPDP35247 375 aa10.55□□□□□ -0.72
PTPN6-219ENST00000542848 RPL3P39023 403 aaKnown RBP10.55□□□□□ -0.72
PTPN6-219ENST00000542848 P2RX1P51575 399 aa10.55□□□□□ -0.72
PTPN6-219ENST00000542848 GYS2P54840 703 aa10.55□□□□□ -0.72
PTPN6-219ENST00000542848 SUMO3P55854 103 aaPredicted RBP10.55□□□□□ -0.72
PTPN6-219ENST00000542848 GUCY1A3Q02108 690 aa10.55□□□□□ -0.72
PTPN6-219ENST00000542848 ZNF117Q03924 483 aa10.55□□□□□ -0.72
PTPN6-219ENST00000542848 P2RY6Q15077 328 aa10.55□□□□□ -0.72
PTPN6-219ENST00000542848 KANK2Q63ZY3 851 aa10.55□□□□□ -0.72
PTPN6-219ENST00000542848 CDC73Q6P1J9 531 aa10.55□□□□□ -0.72
PTPN6-219ENST00000542848 TFAP2EQ6VUC0 442 aa10.55□□□□□ -0.72
PTPN6-219ENST00000542848 DNAJC14Q6Y2X3 702 aaPredicted RBP10.55□□□□□ -0.72
PTPN6-219ENST00000542848 FCRLAQ7L513 359 aa10.55□□□□□ -0.72
PTPN6-219ENST00000542848 NUFIP2Q7Z417 695 aaKnown RBP10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms